RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 BFSP2Q13515 415 aa15.09■□□□□ 0.01
LINC00339-203ENST00000420503 QRICH1Q2TAL8 776 aa15.09■□□□□ 0.01
LINC00339-203ENST00000420503 LRRC8DQ7L1W4 858 aa15.09■□□□□ 0.01
LINC00339-203ENST00000420503 ADGRF4Q8IZF3 695 aa15.09■□□□□ 0.01
LINC00339-203ENST00000420503 PHOSPHO2Q8TCD6 241 aa15.09■□□□□ 0.01
LINC00339-203ENST00000420503 RILPL2Q969X0 211 aa15.09■□□□□ 0.01
LINC00339-203ENST00000420503 OSBPL7Q9BZF2 842 aa15.09■□□□□ 0.01
LINC00339-203ENST00000420503 TSPYL2Q9H2G4 693 aaPredicted RBP15.09■□□□□ 0.01
LINC00339-203ENST00000420503 VAT1LQ9HCJ6 419 aa15.09■□□□□ 0.01
LINC00339-203ENST00000420503 BAZ2BQ9UIF8 2168 aaKnown RBP15.09■□□□□ 0.01
LINC00339-203ENST00000420503 ZMYM6O95789 1325 aa15.09■□□□□ 0.01
LINC00339-203ENST00000420503 FAM86C2PA6NEL3 165 aa15.08■□□□□ 0
LINC00339-203ENST00000420503 TRIM6-TRIM34B2RNG4 842 aa15.08■□□□□ 0
LINC00339-203ENST00000420503 B4E1Z4 1266 aa15.08■□□□□ 0
LINC00339-203ENST00000420503 PPP1R11O60927 126 aaPredicted RBP15.08■□□□□ 0
LINC00339-203ENST00000420503 GH1P01241 217 aa15.08■□□□□ 0
LINC00339-203ENST00000420503 CKBP12277 381 aa15.08■□□□□ 0
LINC00339-203ENST00000420503 PTPN11Q06124 597 aaPredicted RBP15.08■□□□□ 0
LINC00339-203ENST00000420503 SLC35G1Q2M3R5 365 aa15.08■□□□□ 0
LINC00339-203ENST00000420503 TRIM71Q2Q1W2 868 aaKnown RBP15.08■□□□□ 0
LINC00339-203ENST00000420503 BRDTQ58F21 947 aaPredicted RBP15.08■□□□□ 0
LINC00339-203ENST00000420503 PNMA1Q8ND90 353 aa15.08■□□□□ 0
LINC00339-203ENST00000420503 IL31RAQ8NI17 732 aa15.08■□□□□ 0
LINC00339-203ENST00000420503 GPKOWQ92917 476 aaPredicted RBP eCLIP15.08■□□□□ 0
LINC00339-203ENST00000420503 IL25Q9H293 177 aa15.08■□□□□ 0
LINC00339-203ENST00000420503 C11orf16Q9NQ32 467 aa15.08■□□□□ 0
LINC00339-203ENST00000420503 KPNA6O60684 536 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 RGS20O76081 388 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 SELPP16109 830 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 PLA2G5P39877 138 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 KCNJ6P48051 423 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 PSEN2P49810 448 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.07■□□□□ 0
LINC00339-203ENST00000420503 SESTD1Q86VW0 696 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 STAG2Q8N3U4 1231 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 ENAHQ8N8S7 591 aaPredicted RBP15.07■□□□□ 0
LINC00339-203ENST00000420503 AFAP1L1Q8TED9 768 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 TTC14Q96N46 770 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 RMDN3Q96TC7 470 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 LRFN3Q9BTN0 628 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 BCAS3Q9H6U6 928 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 JMJD4Q9H9V9 463 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 SUGCTQ9HAC7 445 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 GTF2IRD1Q9UHL9 959 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 DDX41Q9UJV9 622 aaKnown RBP15.07■□□□□ 0
LINC00339-203ENST00000420503 SIP14410 1827 aa15.07■□□□□ 0
LINC00339-203ENST00000420503 LINC01553A4QN01 128 aa15.06■□□□□ 0
LINC00339-203ENST00000420503 BAIAP3O94812 1187 aa15.06■□□□□ 0
LINC00339-203ENST00000420503 SDSP20132 328 aa15.06■□□□□ 0
LINC00339-203ENST00000420503 GPATCH4Q5T3I0 446 aaKnown RBP15.06■□□□□ 0
LINC00339-203ENST00000420503 ZNF618Q5T7W0 954 aa15.06■□□□□ 0
LINC00339-203ENST00000420503 B4GALNT3Q6L9W6 998 aa15.06■□□□□ 0
LINC00339-203ENST00000420503 RGS22Q8NE09 1264 aa15.06■□□□□ 0
LINC00339-203ENST00000420503 CAGE1Q8TC20 777 aa15.06■□□□□ 0
LINC00339-203ENST00000420503 ESR2Q92731 530 aa15.06■□□□□ 0
LINC00339-203ENST00000420503 HLA-CQ95604 372 aa15.06■□□□□ 0
LINC00339-203ENST00000420503 TELO2Q9Y4R8 837 aa15.06■□□□□ 0
LINC00339-203ENST00000420503 ABCB11O95342 1321 aa15.06■□□□□ 0
LINC00339-203ENST00000420503 DOCK5Q9H7D0 1870 aa15.06■□□□□ 0
LINC00339-203ENST00000420503 MICAL3Q7RTP6 2002 aa15.05■□□□□ 0
LINC00339-203ENST00000420503 KIF28PB7ZC32 967 aa15.05■□□□□ -0
LINC00339-203ENST00000420503 DHX16O60231 1041 aaKnown RBP15.05■□□□□ -0
LINC00339-203ENST00000420503 CXCL10P02778 98 aa15.05■□□□□ -0
LINC00339-203ENST00000420503 HOXA13P31271 388 aaPredicted RBP15.05■□□□□ -0
LINC00339-203ENST00000420503 SP2Q02086 613 aa15.05■□□□□ -0
LINC00339-203ENST00000420503 RBL2Q08999 1139 aa15.05■□□□□ -0
LINC00339-203ENST00000420503 HDAC1Q13547 482 aaPredicted RBP15.05■□□□□ -0
LINC00339-203ENST00000420503 MFSD10Q14728 455 aa15.05■□□□□ -0
LINC00339-203ENST00000420503 KIAA0753Q2KHM9 967 aa15.05■□□□□ -0
LINC00339-203ENST00000420503 CNKSR3Q6P9H4 555 aa15.05■□□□□ -0
LINC00339-203ENST00000420503 CWC27Q6UX04 472 aaKnown RBP15.05■□□□□ -0
LINC00339-203ENST00000420503 DGKHQ86XP1 1220 aa15.05■□□□□ -0
LINC00339-203ENST00000420503 NSUN6Q8TEA1 469 aaKnown RBP15.05■□□□□ -0
LINC00339-203ENST00000420503 C17orf80Q9BSJ5 609 aa15.05■□□□□ -0
LINC00339-203ENST00000420503 ZBED2Q9BTP6 218 aa15.05■□□□□ -0
LINC00339-203ENST00000420503 PXMP2Q9NR77 195 aa15.05■□□□□ -0
LINC00339-203ENST00000420503 HAS3O00219 553 aa15.04■□□□□ -0
LINC00339-203ENST00000420503 GJB5O95377 273 aa15.04■□□□□ -0
LINC00339-203ENST00000420503 F2P00734 622 aa15.04■□□□□ -0
LINC00339-203ENST00000420503 CFBP00751 764 aa15.04■□□□□ -0
LINC00339-203ENST00000420503 NR3C2P08235 984 aa15.04■□□□□ -0
LINC00339-203ENST00000420503 STXBP2Q15833 593 aa15.04■□□□□ -0
LINC00339-203ENST00000420503 AAK1Q2M2I8 961 aa15.04■□□□□ -0
LINC00339-203ENST00000420503 ARHGEF16Q5VV41 709 aa15.04■□□□□ -0
LINC00339-203ENST00000420503 FBXO11Q86XK2 927 aa15.04■□□□□ -0
LINC00339-203ENST00000420503 C7orf31Q8N865 590 aa15.04■□□□□ -0
LINC00339-203ENST00000420503 ZSCAN10Q96SZ4 725 aaPredicted RBP15.04■□□□□ -0
LINC00339-203ENST00000420503 MPHOSPH6Q99547 160 aaKnown RBP15.04■□□□□ -0
LINC00339-203ENST00000420503 KAT14Q9H8E8 782 aa15.04■□□□□ -0
LINC00339-203ENST00000420503 ZSWIM5Q9P217 1185 aa15.04■□□□□ -0
LINC00339-203ENST00000420503 ZBTB47Q9UFB7 747 aaPredicted RBP15.04■□□□□ -0
LINC00339-203ENST00000420503 MRVI1Q9Y6F6 885 aa15.04■□□□□ -0
LINC00339-203ENST00000420503 MUC6Q6W4X9 2439 aa15.03■□□□□ -0
LINC00339-203ENST00000420503 ZNF213O14771 459 aa15.03■□□□□ -0
LINC00339-203ENST00000420503 MYCLP12524 364 aaPredicted RBP15.03■□□□□ -0
LINC00339-203ENST00000420503 CASTP20810 708 aaKnown RBP15.03■□□□□ -0
LINC00339-203ENST00000420503 MKRN4PQ13434 485 aaPredicted RBP15.03■□□□□ -0
LINC00339-203ENST00000420503 DGKDQ16760 1214 aa15.03■□□□□ -0
LINC00339-203ENST00000420503 HSDL1Q3SXM5 330 aa15.03■□□□□ -0
LINC00339-203ENST00000420503 PLEKHM2Q8IWE5 1019 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms