RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 PPP1R12BO60237 982 aaPredicted RBP15.07■□□□□ 0
TMEM50B-201ENST00000420455 KCNB1Q14721 858 aa15.07■□□□□ 0
TMEM50B-201ENST00000420455 ZRSR1Q15695 479 aaKnown RBP15.07■□□□□ 0
TMEM50B-201ENST00000420455 GPR162Q16538 588 aa15.07■□□□□ 0
TMEM50B-201ENST00000420455 MED15Q96RN5 788 aa15.07■□□□□ 0
TMEM50B-201ENST00000420455 C7orf25Q9BPX7 421 aa15.07■□□□□ 0
TMEM50B-201ENST00000420455 UNCXA6NJT0 531 aa15.07■□□□□ 0
TMEM50B-201ENST00000420455 SMTNL1A8MU46 457 aa15.07■□□□□ 0
TMEM50B-201ENST00000420455 KLRC4O43908 158 aa15.07■□□□□ 0
TMEM50B-201ENST00000420455 ZBED4O75132 1171 aa15.07■□□□□ 0
TMEM50B-201ENST00000420455 IREB2P48200 963 aaKnown RBP15.07■□□□□ 0
TMEM50B-201ENST00000420455 PPATQ06203 517 aa15.07■□□□□ 0
TMEM50B-201ENST00000420455 CUL4BQ13620 913 aa15.07■□□□□ 0
TMEM50B-201ENST00000420455 EHMT1Q9H9B1 1298 aa15.07■□□□□ 0
TMEM50B-201ENST00000420455 BLOC1S4Q9NUP1 217 aa15.07■□□□□ 0
TMEM50B-201ENST00000420455 PCDHA12Q9UN75 941 aa15.07■□□□□ 0
TMEM50B-201ENST00000420455 CFBP00751 764 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 ERCC5P28715 1186 aaPredicted RBP15.06■□□□□ 0
TMEM50B-201ENST00000420455 AFMP43652 599 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 COG2Q14746 738 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 CCDC186Q7Z3E2 898 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 PNMA8AQ86V59 439 aaPredicted RBP15.06■□□□□ 0
TMEM50B-201ENST00000420455 ZNF214Q9UL59 606 aaPredicted RBP15.06■□□□□ 0
TMEM50B-201ENST00000420455 A0A0G2JLL6 359 aaPredicted RBP15.06■□□□□ 0
TMEM50B-201ENST00000420455 CASP1P29466 404 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 NIPA1Q7RTP0 329 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 PRRT2Q7Z6L0 340 aaPredicted RBP15.06■□□□□ 0
TMEM50B-201ENST00000420455 ATG4CQ96DT6 458 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 WNK4Q96J92 1243 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 COL20A1Q9P218 1284 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 DACH1Q9UI36 760 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 VAV3Q9UKW4 847 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 KCNH4Q9UQ05 1017 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 STK24Q9Y6E0 443 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 POTEMA6NI47 508 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 NFIBO00712 420 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 MSH4O15457 936 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 ATP1A3P13637 1013 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 HOXA7P31268 230 aaPredicted RBP15.06■□□□□ 0
TMEM50B-201ENST00000420455 LRMPQ12912 555 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 MUM1L1Q5H9M0 696 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 KCTD17Q8N5Z5 321 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 RAVER2Q9HCJ3 691 aaKnown RBP15.06■□□□□ 0
TMEM50B-201ENST00000420455 LCTP09848 1927 aa15.06■□□□□ 0
TMEM50B-201ENST00000420455 PPP1R3GB7ZBB8 358 aa15.05■□□□□ 0
TMEM50B-201ENST00000420455 OFD1O75665 1012 aa15.05■□□□□ 0
TMEM50B-201ENST00000420455 BCRP11274 1271 aa15.05■□□□□ 0
TMEM50B-201ENST00000420455 LBX2Q6XYB7 198 aa15.05■□□□□ 0
TMEM50B-201ENST00000420455 ANKRD13AQ8IZ07 590 aa15.05■□□□□ 0
TMEM50B-201ENST00000420455 PROCA1Q8NCQ7 364 aaPredicted RBP15.05■□□□□ 0
TMEM50B-201ENST00000420455 ENOX1Q8TC92 643 aaKnown RBP15.05■□□□□ 0
TMEM50B-201ENST00000420455 SLC5A5Q92911 643 aa15.05■□□□□ 0
TMEM50B-201ENST00000420455 CALML4Q96GE6 196 aa15.05■□□□□ 0
TMEM50B-201ENST00000420455 NUDT12Q9BQG2 462 aa15.05■□□□□ 0
TMEM50B-201ENST00000420455 TMOD4Q9NZQ9 345 aa15.05■□□□□ 0
TMEM50B-201ENST00000420455 SPDYE5A6NIY4 337 aa15.05■□□□□ -0
TMEM50B-201ENST00000420455 MEIS1O00470 390 aa15.05■□□□□ -0
TMEM50B-201ENST00000420455 FMR1Q06787 632 aaKnown RBP eCLIP15.05■□□□□ -0
TMEM50B-201ENST00000420455 ECM1Q16610 540 aa15.05■□□□□ -0
TMEM50B-201ENST00000420455 TKFCQ3LXA3 575 aa15.05■□□□□ -0
TMEM50B-201ENST00000420455 COBLL1Q53SF7 1204 aa15.05■□□□□ -0
TMEM50B-201ENST00000420455 B3GNT9Q6UX72 402 aa15.05■□□□□ -0
TMEM50B-201ENST00000420455 KIAA1524Q8TCG1 905 aa15.05■□□□□ -0
TMEM50B-201ENST00000420455 RMND1Q9NWS8 449 aa15.05■□□□□ -0
TMEM50B-201ENST00000420455 CXCL11O14625 94 aa15.04■□□□□ -0
TMEM50B-201ENST00000420455 RHOBTB3O94955 611 aa15.04■□□□□ -0
TMEM50B-201ENST00000420455 RPN1P04843 607 aaKnown RBP15.04■□□□□ -0
TMEM50B-201ENST00000420455 MYL5Q02045 173 aa15.04■□□□□ -0
TMEM50B-201ENST00000420455 PRR16Q569H4 304 aa15.04■□□□□ -0
TMEM50B-201ENST00000420455 LDLRAD1Q5T700 205 aa15.04■□□□□ -0
TMEM50B-201ENST00000420455 SYTL5Q8TDW5 730 aaPredicted RBP15.04■□□□□ -0
TMEM50B-201ENST00000420455 HOXC10Q9NYD6 342 aa15.04■□□□□ -0
TMEM50B-201ENST00000420455 CSADQ9Y600 493 aa15.04■□□□□ -0
TMEM50B-201ENST00000420455 KDM3AQ9Y4C1 1321 aa15.04■□□□□ -0
TMEM50B-201ENST00000420455 SPDYE16A6NNV3 312 aaPredicted RBP15.04■□□□□ -0
TMEM50B-201ENST00000420455 IRF6O14896 467 aa15.04■□□□□ -0
TMEM50B-201ENST00000420455 MOGSQ13724 837 aa15.04■□□□□ -0
TMEM50B-201ENST00000420455 ARID5BQ14865 1188 aa15.04■□□□□ -0
TMEM50B-201ENST00000420455 ZNF658Q5TYW1 1059 aaPredicted RBP15.04■□□□□ -0
TMEM50B-201ENST00000420455 KRT79Q5XKE5 535 aa15.04■□□□□ -0
TMEM50B-201ENST00000420455 POTEEQ6S8J3 1075 aa15.04■□□□□ -0
TMEM50B-201ENST00000420455 ERO1BQ86YB8 467 aa15.04■□□□□ -0
TMEM50B-201ENST00000420455 TRIM9Q9C026 710 aa15.04■□□□□ -0
TMEM50B-201ENST00000420455 PSMD10O75832 226 aa15.03■□□□□ -0
TMEM50B-201ENST00000420455 CD44P16070 742 aaKnown RBP15.03■□□□□ -0
TMEM50B-201ENST00000420455 SETQ01105 290 aaPredicted RBP15.03■□□□□ -0
TMEM50B-201ENST00000420455 TMEM132BQ14DG7 1078 aa15.03■□□□□ -0
TMEM50B-201ENST00000420455 PCNX4Q63HM2 1172 aa15.03■□□□□ -0
TMEM50B-201ENST00000420455 CYP2W1Q8TAV3 490 aa15.03■□□□□ -0
TMEM50B-201ENST00000420455 RAD54LQ92698 747 aa15.03■□□□□ -0
TMEM50B-201ENST00000420455 SPTLC3Q9NUV7 552 aa15.03■□□□□ -0
TMEM50B-201ENST00000420455 PPIL2Q13356 520 aa15.03■□□□□ -0
TMEM50B-201ENST00000420455 PPP2R5CQ13362 524 aa15.03■□□□□ -0
TMEM50B-201ENST00000420455 CEP55Q53EZ4 464 aa15.03■□□□□ -0
TMEM50B-201ENST00000420455 FCHSD1Q86WN1 690 aa15.03■□□□□ -0
TMEM50B-201ENST00000420455 CACTINQ8WUQ7 758 aaKnown RBP15.03■□□□□ -0
TMEM50B-201ENST00000420455 GJA10Q969M2 543 aa15.03■□□□□ -0
TMEM50B-201ENST00000420455 TRERF1Q96PN7 1200 aa15.03■□□□□ -0
TMEM50B-201ENST00000420455 GTPBP4Q9BZE4 634 aaKnown RBP15.03■□□□□ -0
TMEM50B-201ENST00000420455 NT5C3AQ9H0P0 336 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms