RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	DDX41	Q9UJV9	622 aa	Known RBP	18.89	■□□□□ 0.61
DDR1-231	ENST00000417521	LCT	P09848	1927 aa		18.88	■□□□□ 0.61
DDR1-231	ENST00000417521	PIK3CD	O00329	1044 aa		18.88	■□□□□ 0.61
DDR1-231	ENST00000417521	MYL3	P08590	195 aa		18.88	■□□□□ 0.61
DDR1-231	ENST00000417521	MYCL	P12524	364 aa	Predicted RBP	18.88	■□□□□ 0.61
DDR1-231	ENST00000417521	KCNV1	Q6PIU1	500 aa		18.88	■□□□□ 0.61
DDR1-231	ENST00000417521	CCDC82	Q8N4S0	544 aa		18.88	■□□□□ 0.61
DDR1-231	ENST00000417521	CUL5	Q93034	780 aa		18.88	■□□□□ 0.61
DDR1-231	ENST00000417521	JAKMIP1	Q96N16	626 aa	Known RBP	18.88	■□□□□ 0.61
DDR1-231	ENST00000417521	MTG1	Q9BT17	334 aa	Predicted RBP	18.88	■□□□□ 0.61
DDR1-231	ENST00000417521	MRVI1	Q9Y6F6	885 aa		18.88	■□□□□ 0.61
DDR1-231	ENST00000417521	LAMA3	Q16787	3333 aa		18.88	■□□□□ 0.61
DDR1-231	ENST00000417521	KLF18	A0A0U1RQI7	1052 aa		18.87	■□□□□ 0.61
DDR1-231	ENST00000417521	RGS20	O76081	388 aa		18.87	■□□□□ 0.61
DDR1-231	ENST00000417521	TIMP1	P01033	207 aa		18.87	■□□□□ 0.61
DDR1-231	ENST00000417521	TGFB3	P10600	412 aa		18.87	■□□□□ 0.61
DDR1-231	ENST00000417521	PSMA5	P28066	241 aa		18.87	■□□□□ 0.61
DDR1-231	ENST00000417521	CCND2	P30279	289 aa		18.87	■□□□□ 0.61
DDR1-231	ENST00000417521	PSMC6	P62333	389 aa		18.87	■□□□□ 0.61
DDR1-231	ENST00000417521	FGD1	P98174	961 aa		18.87	■□□□□ 0.61
DDR1-231	ENST00000417521	ARHGAP1	Q07960	439 aa		18.87	■□□□□ 0.61
DDR1-231	ENST00000417521	BLOC1S2	Q6QNY1	142 aa		18.87	■□□□□ 0.61
DDR1-231	ENST00000417521	FBXL16	Q8N461	479 aa		18.87	■□□□□ 0.61
DDR1-231	ENST00000417521	EMID1	Q96A84	441 aa	Predicted RBP	18.87	■□□□□ 0.61
DDR1-231	ENST00000417521	LRRC37A2	A6NM11	1700 aa		18.87	■□□□□ 0.61
DDR1-231	ENST00000417521	SOX1	O00570	391 aa	Predicted RBP	18.86	■□□□□ 0.61
DDR1-231	ENST00000417521	MEIS2	O14770	477 aa		18.86	■□□□□ 0.61
DDR1-231	ENST00000417521	RTN1	Q16799	776 aa		18.86	■□□□□ 0.61
DDR1-231	ENST00000417521	IL31RA	Q8NI17	732 aa		18.86	■□□□□ 0.61
DDR1-231	ENST00000417521	SMARCC2	Q8TAQ2	1214 aa		18.86	■□□□□ 0.61
DDR1-231	ENST00000417521	FRMPD4	Q14CM0	1322 aa		18.86	■□□□□ 0.61
DDR1-231	ENST00000417521	STAM2	O75886	525 aa		18.85	■□□□□ 0.61
DDR1-231	ENST00000417521	CPA1	P15085	419 aa		18.85	■□□□□ 0.61
DDR1-231	ENST00000417521	FPGS	Q05932	587 aa		18.85	■□□□□ 0.61
DDR1-231	ENST00000417521	FUT2	Q10981	343 aa		18.85	■□□□□ 0.61
DDR1-231	ENST00000417521	LAMC2	Q13753	1193 aa		18.85	■□□□□ 0.61
DDR1-231	ENST00000417521	MFSD5	Q6N075	450 aa		18.85	■□□□□ 0.61
DDR1-231	ENST00000417521	GPR153	Q6NV75	609 aa		18.85	■□□□□ 0.61
DDR1-231	ENST00000417521	USP17L6P	Q6QN14	398 aa		18.85	■□□□□ 0.61
DDR1-231	ENST00000417521	AFG1L	Q8WV93	481 aa		18.85	■□□□□ 0.61
DDR1-231	ENST00000417521	PSTPIP2	Q9H939	334 aa		18.85	■□□□□ 0.61
DDR1-231	ENST00000417521	hCG_1642624	A0A1W2PR95	340 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	GOLGA8A	A7E2F4	631 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	GOLGA8B	A8MQT2	603 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	CAST	P20810	708 aa	Known RBP	18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	RPS6KB1	P23443	525 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	XRRA1	Q6P2D8	792 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521		Q6ZUG5	572 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	DHX37	Q8IY37	1157 aa	Known RBP	18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	LRCH3	Q96II8	777 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	AGXT2	Q9BYV1	514 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	CCDC196	A0A1B0GTZ2	297 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	MMP3	P08254	477 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	SUPT20HL2	P0C7V6	817 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	SHH	Q15465	462 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	NBPF20	Q3BBV1	942 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	GNPTAB	Q3T906	1256 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	NFRKB	Q6P4R8	1299 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	TEX2	Q8IWB9	1127 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	SLC17A8	Q8NDX2	589 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	BRF1	Q92994	677 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	INPP4A	Q96PE3	977 aa	Predicted RBP	18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	C22orf23	Q9BZE7	217 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	TRPV6	Q9H1D0	765 aa		18.84	■□□□□ 0.61
DDR1-231	ENST00000417521	CNTNAP5	Q8WYK1	1306 aa		18.83	■□□□□ 0.61
DDR1-231	ENST00000417521	B4GALT4	O60513	344 aa		18.83	■□□□□ 0.6
DDR1-231	ENST00000417521	CDC27	P30260	824 aa		18.83	■□□□□ 0.6
DDR1-231	ENST00000417521	METAP2	P50579	478 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
DDR1-231	ENST00000417521	MRPS9	P82933	396 aa	Known RBP	18.83	■□□□□ 0.6
DDR1-231	ENST00000417521	PTPN11	Q06124	597 aa	Predicted RBP	18.83	■□□□□ 0.6
DDR1-231	ENST00000417521	APOBR	Q0VD83	1088 aa		18.83	■□□□□ 0.6
DDR1-231	ENST00000417521	DGKD	Q16760	1214 aa		18.83	■□□□□ 0.6
DDR1-231	ENST00000417521	C9orf50	Q5SZB4	431 aa		18.83	■□□□□ 0.6
DDR1-231	ENST00000417521	MYSM1	Q5VVJ2	828 aa		18.83	■□□□□ 0.6
DDR1-231	ENST00000417521	HEATR3	Q7Z4Q2	680 aa		18.83	■□□□□ 0.6
DDR1-231	ENST00000417521	TMEM199	Q8N511	208 aa		18.83	■□□□□ 0.6
DDR1-231	ENST00000417521	PPTC7	Q8NI37	304 aa		18.83	■□□□□ 0.6
DDR1-231	ENST00000417521		V9GY48	417 aa	Predicted RBP	18.83	■□□□□ 0.6
DDR1-231	ENST00000417521	hCG_1984214	I3L0E3	225 aa		18.82	■□□□□ 0.6
DDR1-231	ENST00000417521	ICAM3	P32942	547 aa		18.82	■□□□□ 0.6
DDR1-231	ENST00000417521	ADD1	P35611	737 aa	Known RBP	18.82	■□□□□ 0.6
DDR1-231	ENST00000417521	ANAPC15	P60006	121 aa		18.82	■□□□□ 0.6
DDR1-231	ENST00000417521	CELF3	Q5SZQ8	465 aa	Known RBP	18.82	■□□□□ 0.6
DDR1-231	ENST00000417521	PCNX4	Q63HM2	1172 aa		18.82	■□□□□ 0.6
DDR1-231	ENST00000417521	ZNF713	Q8N859	430 aa	Predicted RBP	18.82	■□□□□ 0.6
DDR1-231	ENST00000417521	PPP1R12C	Q9BZL4	782 aa		18.82	■□□□□ 0.6
DDR1-231	ENST00000417521	HIPK3	Q9H422	1215 aa		18.82	■□□□□ 0.6
DDR1-231	ENST00000417521	UPF2	Q9HAU5	1272 aa	Known RBP	18.82	■□□□□ 0.6
DDR1-231	ENST00000417521	NAP1L2	Q9ULW6	460 aa	Predicted RBP	18.82	■□□□□ 0.6
DDR1-231	ENST00000417521	SZT2	Q5T011	3432 aa		18.82	■□□□□ 0.6
DDR1-231	ENST00000417521	PPFIA4	O75335	1185 aa		18.81	■□□□□ 0.6
DDR1-231	ENST00000417521	GGPS1	O95749	300 aa		18.81	■□□□□ 0.6
DDR1-231	ENST00000417521	EPHB4	P54760	987 aa		18.81	■□□□□ 0.6
DDR1-231	ENST00000417521	SP2	Q02086	613 aa		18.81	■□□□□ 0.6
DDR1-231	ENST00000417521	PPIG	Q13427	754 aa	Known RBP eCLIP	18.81	■□□□□ 0.6
DDR1-231	ENST00000417521	WWC2	Q6AWC2	1192 aa		18.81	■□□□□ 0.6
DDR1-231	ENST00000417521	PPP1R18	Q6NYC8	613 aa		18.81	■□□□□ 0.6
DDR1-231	ENST00000417521	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	18.81	■□□□□ 0.6

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