RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 IFIT1P09914 478 aaKnown RBP9.85□□□□□ -0.83
SP140-204ENST00000417495 ATF4P18848 351 aaPredicted RBP9.85□□□□□ -0.83
SP140-204ENST00000417495 EHHADHQ08426 723 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 BTG3Q14201 252 aaPredicted RBP9.85□□□□□ -0.83
SP140-204ENST00000417495 PUM3Q15397 648 aaKnown RBP9.85□□□□□ -0.83
SP140-204ENST00000417495 HLFQ16534 295 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 TPD52L1Q16890 204 aaPredicted RBP9.85□□□□□ -0.83
SP140-204ENST00000417495 LRRC27Q9C0I9 530 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.85□□□□□ -0.83
SP140-204ENST00000417495 CD248Q9HCU0 757 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 PAPOLBQ9NRJ5 636 aaKnown RBP9.85□□□□□ -0.83
SP140-204ENST00000417495 TUBGCP4Q9UGJ1 667 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 CROTQ9UKG9 612 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 CORO1CQ9ULV4 474 aaPredicted RBP9.85□□□□□ -0.83
SP140-204ENST00000417495 GMEB1Q9Y692 573 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 QSER1Q2KHR3 1735 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 PPFIA3O75145 1194 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 INPP5BP32019 993 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 INHBCP55103 352 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 BLOC1S2Q6QNY1 142 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 LMNTD2Q8IXW0 634 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 WHAMMQ8TF30 809 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 APPBP2Q92624 585 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 FAM227BQ96M60 508 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 SIL1Q9H173 461 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 NRDE2Q9H7Z3 1164 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 COMMD8Q9NX08 183 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 DIS3Q9Y2L1 958 aaKnown RBP9.85□□□□□ -0.83
SP140-204ENST00000417495 DLEC1Q9Y238 1755 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 UBR3Q6ZT12 1888 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 MPSTP25325 297 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 MZF1P28698 734 aaPredicted RBP9.85□□□□□ -0.83
SP140-204ENST00000417495 TMEM62Q0P6H9 643 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 CCDC152Q4G0S7 254 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 ATL3Q6DD88 541 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 MIS18BP1Q6P0N0 1132 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 GALNT15Q8N3T1 639 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 ENOX1Q8TC92 643 aaKnown RBP9.85□□□□□ -0.83
SP140-204ENST00000417495 NYXQ9GZU5 481 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 QTRT2Q9H974 415 aaKnown RBP9.85□□□□□ -0.83
SP140-204ENST00000417495 NEUROD4Q9HD90 331 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 SPO11Q9Y5K1 396 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 NRXN2Q9P2S2 1712 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 ESYT3A0FGR9 886 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 ANKRD65E5RJM6 399 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 RPS6KA4O75676 772 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 FSBPO95073 299 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 ITGA6P23229 1130 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 EXOSC10Q01780 885 aaKnown RBP9.84□□□□□ -0.83
SP140-204ENST00000417495 ITPK1Q13572 414 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 DSC3Q14574 896 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 SLMAPQ14BN4 828 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 GNPTABQ3T906 1256 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 LRRC24Q50LG9 513 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 SMUG1Q53HV7 270 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 PDCD7Q8N8D1 485 aaKnown RBP9.84□□□□□ -0.83
SP140-204ENST00000417495 TTC13Q8NBP0 860 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 SH3TC2Q8TF17 1288 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 LZICQ8WZA0 190 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 OSBPL10Q9BXB5 764 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 C6orf203Q9P0P8 240 aaPredicted RBP9.84□□□□□ -0.83
SP140-204ENST00000417495 ZNF804BA4D1E1 1349 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 PRPF40AO75400 957 aaKnown RBP9.84□□□□□ -0.83
SP140-204ENST00000417495 GBP2P32456 591 aaPredicted RBP9.84□□□□□ -0.83
SP140-204ENST00000417495 CCDC38Q502W7 563 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 ARHGAP29Q52LW3 1261 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 PRPF40BQ6NWY9 871 aaKnown RBP9.84□□□□□ -0.83
SP140-204ENST00000417495 HOOK3Q86VS8 718 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 APLFQ8IW19 511 aaPredicted RBP9.84□□□□□ -0.83
SP140-204ENST00000417495 TPCN2Q8NHX9 752 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 KLHDC4Q8TBB5 520 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 JAKMIP1Q96N16 626 aaKnown RBP9.84□□□□□ -0.83
SP140-204ENST00000417495 SNTG2Q9NY99 539 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 IKBKGQ9Y6K9 419 aa9.84□□□□□ -0.83
SP140-204ENST00000417495 CHD4Q14839 1912 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 TUBB4AP04350 444 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 POU3F3P20264 500 aaPredicted RBP9.83□□□□□ -0.84
SP140-204ENST00000417495 ERCC6LQ2NKX8 1250 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 TRIM58Q8NG06 486 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 ZNF274Q96GC6 653 aaPredicted RBP9.83□□□□□ -0.84
SP140-204ENST00000417495 METTL5Q9NRN9 209 aaKnown RBP9.83□□□□□ -0.84
SP140-204ENST00000417495 NARFQ9UHQ1 456 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 TRMT112Q9UI30 125 aaKnown RBP9.83□□□□□ -0.84
SP140-204ENST00000417495 INTUQ9ULD6 942 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 TMED5Q9Y3A6 229 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 IDO1P14902 403 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 MCM3P25205 808 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 RCAN1P53805 252 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 CNGA3Q16281 694 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.83□□□□□ -0.84
SP140-204ENST00000417495 TTC39AQ5SRH9 613 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 CEP85LQ5SZL2 805 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 NUGGCQ68CJ6 796 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 RSPH3Q86UC2 560 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 SLAIN1Q8ND83 568 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 SMARCC2Q8TAQ2 1214 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 NEK1Q96PY6 1258 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 PHF24Q9UPV7 400 aa9.83□□□□□ -0.84
SP140-204ENST00000417495 MAST3O60307 1309 aa9.82□□□□□ -0.84
SP140-204ENST00000417495 PNPLA7Q6ZV29 1317 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms