RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 CD44P16070 742 aaKnown RBP12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 RPA1P27694 616 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 CDC25AP30304 524 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 GMPSP49915 693 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 KIF4BQ2VIQ3 1234 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 SUPT20HL1Q3ZLR7 823 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 TCP11X2Q5H9J9 407 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 ARHGAP27Q6ZUM4 889 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 MICALL2Q8IY33 904 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 GPC2Q8N158 579 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 ETNPPLQ8TBG4 499 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 NEK9Q8TD19 979 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 ACER1Q8TDN7 264 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 P2RX5Q93086 422 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 TEPSINQ96N21 525 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 NAP1L5Q96NT1 182 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 TSG101Q99816 390 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 SLF1Q9BQI6 1058 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 TUFT1Q9NNX1 390 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 SAMSN1Q9NSI8 373 aaKnown RBP12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 BLOC1S4Q9NUP1 217 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 DNM3Q9UQ16 869 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 CTNND2Q9UQB3 1225 aa12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 CTDP1Q9Y5B0 961 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC12-205ENST00000416918 KCNJ18B7U540 433 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 N4BP3O15049 544 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 ZBED4O75132 1171 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 GNA14O95837 355 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 LMNB1P20700 586 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 ECE1P42892 770 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 DNM2P50570 870 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 OAZ1P54368 228 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 JAG1P78504 1218 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 LRMPQ12912 555 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 KCNJ12Q14500 433 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 PTPN14Q15678 1187 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 CENPPQ6IPU0 288 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 PPP4R3CPQ6ZMV5 832 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 CCAR2Q8N163 923 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 TRIM47Q96LD4 638 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 PNMA5Q96PV4 448 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 MED15Q96RN5 788 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 NUP88Q99567 741 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 RIT2Q99578 217 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 PICK1Q9NRD5 415 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 KCND2Q9NZV8 630 aa12.33□□□□□ -0.44
TRAPPC12-205ENST00000416918 COL4A5P29400 1685 aa12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 PBX1P40424 430 aa12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 HSD17B4P51659 736 aa12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 COPB1P53618 953 aaKnown RBP12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 R3HDM1Q15032 1099 aaKnown RBP12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 TSR1Q2NL82 804 aaKnown RBP12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 TKFCQ3LXA3 575 aa12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 USH1GQ495M9 461 aa12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 PRR16Q569H4 304 aa12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 TTI2Q6NXR4 508 aa12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 ARMCX5Q6P1M9 558 aa12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 MIGA2Q7L4E1 593 aa12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 APTXQ7Z2E3 356 aaKnown RBP12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 LDHDQ86WU2 507 aa12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 TRMT44Q8IYL2 757 aaKnown RBP12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 SPICE1Q8N0Z3 855 aa12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 CSGALNACT2Q8N6G5 542 aa12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 STAMQ92783 540 aa12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 KIFC2Q96AC6 838 aa12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 C12orf42Q96LP6 360 aa12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 BAG1Q99933 345 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 PPP1R1BQ9UD71 204 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 MYPNQ86TC9 1320 aa12.32□□□□□ -0.44
TRAPPC12-205ENST00000416918 LGALS16A8MUM7 142 aa12.31□□□□□ -0.44
TRAPPC12-205ENST00000416918 DYNC1I1O14576 645 aa12.31□□□□□ -0.44
TRAPPC12-205ENST00000416918 GAP43P17677 238 aa12.31□□□□□ -0.44
TRAPPC12-205ENST00000416918 STX17P56962 302 aa12.31□□□□□ -0.44
TRAPPC12-205ENST00000416918 EHHADHQ08426 723 aa12.31□□□□□ -0.44
TRAPPC12-205ENST00000416918 PPP2R5CQ13362 524 aa12.31□□□□□ -0.44
TRAPPC12-205ENST00000416918 MCM6Q14566 821 aa12.31□□□□□ -0.44
TRAPPC12-205ENST00000416918 KRT31Q15323 416 aa12.31□□□□□ -0.44
TRAPPC12-205ENST00000416918 CEP55Q53EZ4 464 aa12.31□□□□□ -0.44
TRAPPC12-205ENST00000416918 CCDC84Q86UT8 332 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC12-205ENST00000416918 TMTC1Q8IUR5 882 aa12.31□□□□□ -0.44
TRAPPC12-205ENST00000416918 SCYL3Q8IZE3 742 aa12.31□□□□□ -0.44
TRAPPC12-205ENST00000416918 RBM46Q8TBY0 533 aaKnown RBP12.31□□□□□ -0.44
TRAPPC12-205ENST00000416918 DDX12PQ92771 950 aa12.31□□□□□ -0.44
TRAPPC12-205ENST00000416918 HACL1Q9UJ83 578 aa12.31□□□□□ -0.44
TRAPPC12-205ENST00000416918 R3HCC1Q9Y3T6 440 aaKnown RBP12.31□□□□□ -0.44
TRAPPC12-205ENST00000416918 POTEMA6NI47 508 aa12.3□□□□□ -0.44
TRAPPC12-205ENST00000416918 MYMKA6NI61 221 aa12.3□□□□□ -0.44
TRAPPC12-205ENST00000416918 MEIS1O00470 390 aa12.3□□□□□ -0.44
TRAPPC12-205ENST00000416918 OPLAHO14841 1288 aa12.3□□□□□ -0.44
TRAPPC12-205ENST00000416918 MAFGO15525 162 aa12.3□□□□□ -0.44
TRAPPC12-205ENST00000416918 CFBP00751 764 aa12.3□□□□□ -0.44
TRAPPC12-205ENST00000416918 PLA2G4BP0C869 781 aa12.3□□□□□ -0.44
TRAPPC12-205ENST00000416918 TNNT1P13805 278 aa12.3□□□□□ -0.44
TRAPPC12-205ENST00000416918 FECHP22830 423 aa12.3□□□□□ -0.44
TRAPPC12-205ENST00000416918 CASP1P29466 404 aa12.3□□□□□ -0.44
TRAPPC12-205ENST00000416918 GTF2F1P35269 517 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRAPPC12-205ENST00000416918 BACE1P56817 501 aa12.3□□□□□ -0.44
TRAPPC12-205ENST00000416918 PPP2R3AQ06190 1150 aa12.3□□□□□ -0.44
TRAPPC12-205ENST00000416918 SHROOM1Q2M3G4 852 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-205ENST00000416918 FIGNQ5HY92 759 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms