RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 IRF6O14896 467 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 CTNNA1P35221 906 aaKnown RBP16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 MAGEA1P43355 309 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 KIF11P52732 1056 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 INHBEP58166 350 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 GRIK3Q13003 919 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 C11orf91Q3C1V1 193 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 FERMT2Q96AC1 680 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 RMND1Q9NWS8 449 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 SALL4Q9UJQ4 1053 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 NOVA2Q9UNW9 492 aaKnown RBP16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 SLC4A4Q9Y6R1 1079 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 AFF2P51816 1311 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 PDS5AQ29RF7 1337 aaKnown RBP16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 TRAPPC3O43617 180 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 FTCDO95954 541 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 KRT2P35908 639 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 TTC38Q5R3I4 469 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 TBC1D9BQ66K14 1250 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 UBLCP1Q8WVY7 318 aaPredicted RBP16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 RUBCNQ92622 972 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 YIPF3Q9GZM5 350 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 GGA2Q9UJY4 613 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 ZNF532Q9HCE3 1301 aa16.21■□□□□ 0.19
NCKIPSD-204ENST00000416649 COL22A1Q8NFW1 1626 aaPredicted RBP16.21■□□□□ 0.19
NCKIPSD-204ENST00000416649 ANP32DO95626 131 aa16.21■□□□□ 0.19
NCKIPSD-204ENST00000416649 XBP1P17861 261 aa16.21■□□□□ 0.19
NCKIPSD-204ENST00000416649 ITIH3Q06033 890 aa16.21■□□□□ 0.19
NCKIPSD-204ENST00000416649 RAPGEF5Q92565 580 aa16.21■□□□□ 0.19
NCKIPSD-204ENST00000416649 SAAL1Q96ER3 474 aa16.21■□□□□ 0.19
NCKIPSD-204ENST00000416649 NOC4LQ9BVI4 516 aaKnown RBP16.21■□□□□ 0.19
NCKIPSD-204ENST00000416649 TLR10Q9BXR5 811 aa16.21■□□□□ 0.19
NCKIPSD-204ENST00000416649 RASSF10A6NK89 507 aa16.21■□□□□ 0.18
NCKIPSD-204ENST00000416649 PDE8BO95263 885 aa16.21■□□□□ 0.18
NCKIPSD-204ENST00000416649 SRGNP10124 158 aa16.21■□□□□ 0.18
NCKIPSD-204ENST00000416649 EEF1GP26641 437 aaKnown RBP16.21■□□□□ 0.18
NCKIPSD-204ENST00000416649 STAT6P42226 847 aa16.21■□□□□ 0.18
NCKIPSD-204ENST00000416649 LIFRP42702 1097 aa16.21■□□□□ 0.18
NCKIPSD-204ENST00000416649 PTPROQ16827 1216 aa16.21■□□□□ 0.18
NCKIPSD-204ENST00000416649 CAPRIN2Q6IMN6 1127 aaKnown RBP16.21■□□□□ 0.18
NCKIPSD-204ENST00000416649 ZNF662Q6ZS27 426 aa16.21■□□□□ 0.18
NCKIPSD-204ENST00000416649 DDX42Q86XP3 938 aaKnown RBP eCLIP16.21■□□□□ 0.18
NCKIPSD-204ENST00000416649 MMRN2Q9H8L6 949 aa16.21■□□□□ 0.18
NCKIPSD-204ENST00000416649 TMBIM4Q9HC24 238 aa16.21■□□□□ 0.18
NCKIPSD-204ENST00000416649 JAG2Q9Y219 1238 aa16.21■□□□□ 0.18
NCKIPSD-204ENST00000416649 BCAMP50895 628 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 SLC8A3P57103 927 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 XRCC4Q13426 336 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 CDC37Q16543 378 aaPredicted RBP16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 MFSD6Q6ZSS7 791 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 CCDC63Q8NA47 563 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 SPAG5Q96R06 1193 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 PLA2G12BQ9BX93 195 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 GDF3Q9NR23 364 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 ARHGAP20Q9P2F6 1191 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 MYO5AQ9Y4I1 1855 aaKnown RBP16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 NUP98P52948 1817 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 PSMA7O14818 248 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 MGRN1O60291 552 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 UPP2O95045 317 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 ADD2P35612 726 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 FAM133BQ5BKY9 247 aaKnown RBP16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 PDXDC2PQ6P474 469 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 FANCBQ8NB91 859 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 MDM1Q8TC05 714 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 MAGEC3Q8TD91 643 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 HOOK2Q96ED9 719 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 MTMR8Q96EF0 704 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 NUP58Q9BVL2 599 aa16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 CNOT8Q9UFF9 292 aaKnown RBP16.2■□□□□ 0.18
NCKIPSD-204ENST00000416649 DCDC2CA8MYV0 355 aa16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 NKRFO15226 690 aaKnown RBP eCLIP16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 ENOX2Q16206 610 aaKnown RBP16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 TDRD12Q587J7 1177 aaKnown RBP16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 RCSD1Q6JBY9 416 aa16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 BZW1Q7L1Q6 419 aaKnown RBP16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 ADSSL1Q8N142 457 aa16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 SPDYE1Q8NFV5 336 aaPredicted RBP16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 SHISA4Q96DD7 197 aa16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 SH3GL3Q99963 347 aa16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 V9GY48 417 aaPredicted RBP16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 LRP6O75581 1613 aa16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 FAM170AA1A519 330 aa16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 HSD17B3P37058 310 aa16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 MAGOHP61326 146 aaKnown RBP16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 MAGOHBQ96A72 148 aaKnown RBP16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 CNOT6LQ96LI5 555 aaKnown RBP16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 ARMT1Q9H993 441 aa16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 PIH1D3Q9NQM4 214 aaKnown RBP16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 TRPC6Q9Y210 931 aa16.19■□□□□ 0.18
NCKIPSD-204ENST00000416649 RAD51CO43502 376 aa16.18■□□□□ 0.18
NCKIPSD-204ENST00000416649 DIAPH2O60879 1101 aa16.18■□□□□ 0.18
NCKIPSD-204ENST00000416649 NTSR2O95665 410 aa16.18■□□□□ 0.18
NCKIPSD-204ENST00000416649 MYBL1P10243 752 aa16.18■□□□□ 0.18
NCKIPSD-204ENST00000416649 PRLRP16471 622 aa16.18■□□□□ 0.18
NCKIPSD-204ENST00000416649 TNFRSF8P28908 595 aa16.18■□□□□ 0.18
NCKIPSD-204ENST00000416649 GFPT1Q06210 699 aaPredicted RBP16.18■□□□□ 0.18
NCKIPSD-204ENST00000416649 BYSLQ13895 437 aaKnown RBP16.18■□□□□ 0.18
NCKIPSD-204ENST00000416649 NBPF9Q3BBW0 867 aa16.18■□□□□ 0.18
NCKIPSD-204ENST00000416649 RRAGAQ7L523 313 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms