RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 CLIC4Q9Y696 253 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 FSD2A1L4K1 749 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 KRT2P35908 639 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 TOB1P50616 345 aaPredicted RBP10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 LHX8Q68G74 356 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 NSMFQ6X4W1 530 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 UBE2Q1Q7Z7E8 422 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 SPATA32Q96LK8 384 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 AGBL1Q96MI9 1066 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 ZNF396Q96N95 335 aaPredicted RBP10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 RANBP17Q9H2T7 1088 aaKnown RBP10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 SH3GLB2Q9NR46 395 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 PRKAG2Q9UGJ0 569 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 SEC63Q9UGP8 760 aaKnown RBP10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 ZHX1Q9UKY1 873 aaPredicted RBP10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 RIPK3Q9Y572 518 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 PNMA6FA0A0J9YX94 578 aa10.52□□□□□ -0.73
CHRNA1-206ENST00000416004 WNT7AO00755 349 aa10.52□□□□□ -0.73
CHRNA1-206ENST00000416004 TAL1P17542 331 aaPredicted RBP10.52□□□□□ -0.73
CHRNA1-206ENST00000416004 NAPAP54920 295 aa10.52□□□□□ -0.73
CHRNA1-206ENST00000416004 QRICH1Q2TAL8 776 aa10.52□□□□□ -0.73
CHRNA1-206ENST00000416004 RASGRP4Q8TDF6 673 aa10.52□□□□□ -0.73
CHRNA1-206ENST00000416004 DIS3LQ8TF46 1054 aaKnown RBP10.52□□□□□ -0.73
CHRNA1-206ENST00000416004 PGBD1Q96JS3 809 aa10.52□□□□□ -0.73
CHRNA1-206ENST00000416004 SENP6Q9GZR1 1112 aaPredicted RBP10.52□□□□□ -0.73
CHRNA1-206ENST00000416004 SCAND2PQ9GZW5 306 aaPredicted RBP10.52□□□□□ -0.73
CHRNA1-206ENST00000416004 ABHD16BQ9H3Z7 469 aa10.52□□□□□ -0.73
CHRNA1-206ENST00000416004 XPNPEP3Q9NQH7 507 aa10.52□□□□□ -0.73
CHRNA1-206ENST00000416004 RTEL1Q9NZ71 1219 aa10.52□□□□□ -0.73
CHRNA1-206ENST00000416004 RCOR1Q9UKL0 485 aa10.52□□□□□ -0.73
CHRNA1-206ENST00000416004 CFAP45Q9UL16 551 aa10.52□□□□□ -0.73
CHRNA1-206ENST00000416004 DDX49Q9Y6V7 483 aaKnown RBP10.52□□□□□ -0.73
CHRNA1-206ENST00000416004 M0R2N6 131 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 ZBTB5O15062 677 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 PTMSP20962 102 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 CDC37Q16543 378 aaPredicted RBP10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 ATL3Q6DD88 541 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 MAMDC4Q6UXC1 1216 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 C7orf61Q8IZ16 206 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 BLIDQ8IZY5 108 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 ZMYND12Q9H0C1 365 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 PCDHA4Q9UN74 947 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 TCHHQ07283 1943 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 ELP1O95163 1332 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 DNAJC25-GNG10A0A024R161 153 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 GOLGA6L3A6NEY3 463 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 H0YGN5 161 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 NASPP49321 788 aaPredicted RBP10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 KLHL40Q2TBA0 621 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 PRAMEF19Q5SWL8 479 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 ANO1Q5XXA6 986 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 MCF2L2Q86YR7 1114 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 DAGLBQ8NCG7 672 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 LINC00301Q8NCQ3 95 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 CCDC148Q8NFR7 591 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 MAF1Q9H063 256 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 A1CFQ9NQ94 594 aaKnown RBP10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 POLR3EQ9NVU0 708 aa10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.51□□□□□ -0.73
CHRNA1-206ENST00000416004 LOC102724159A0A0B4J2E5 919 aa10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 SMCO2A6NFE2 343 aa10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 CALML3P27482 149 aa10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 UBE2HP62256 183 aa10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 ACVR2BQ13705 512 aa10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 PTPAQ15257 358 aa10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 PWP2Q15269 919 aaKnown RBP10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 SF3A1Q15459 793 aaKnown RBP10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 GJC2Q5T442 439 aaPredicted RBP10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 RNF207Q6ZRF8 634 aa10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 ARMCX2Q7L311 632 aa10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 TRPV1Q8NER1 839 aa10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 GZF1Q9H116 711 aaPredicted RBP10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 BRMS1Q9HCU9 246 aa10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 CYP39A1Q9NYL5 469 aa10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 PCDHA6Q9UN73 950 aa10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 PCDHB6Q9Y5E3 794 aa10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 PCDHA8Q9Y5H6 950 aa10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 ZNF536O15090 1300 aa10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 ABCB11O95342 1321 aa10.5□□□□□ -0.73
CHRNA1-206ENST00000416004 ESYT2A0FGR8 921 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 ZEB2O60315 1214 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 ATP2B1P20020 1258 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 CSPP1Q1MSJ5 1256 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 SKOR2Q2VWA4 1001 aaPredicted RBP10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 USH1GQ495M9 461 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 PIK3AP1Q6ZUJ8 805 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 PCSK9Q8NBP7 692 aaKnown RBP10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 MAP7D2Q96T17 732 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 MRPL11Q9Y3B7 192 aaKnown RBP10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 MCM3APO60318 1980 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 SMCHD1A6NHR9 2005 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 MYH15Q9Y2K3 1946 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 hCG_1984214I3L0E3 225 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 YEATS4O95619 227 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 SLC39A14Q15043 492 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 STK38Q15208 465 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 RILPL1Q5EBL4 403 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 MUM1L1Q5H9M0 696 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 GALNT17Q6IS24 598 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 CAVIN1Q6NZI2 390 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms