RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 CYP2B6P20813 491 aa16.51■□□□□ 0.23
SGCE-202ENST00000415788 ALDH5A1P51649 535 aaPredicted RBP16.51■□□□□ 0.23
SGCE-202ENST00000415788 GNL2Q13823 731 aaKnown RBP16.51■□□□□ 0.23
SGCE-202ENST00000415788 ARHGEF16Q5VV41 709 aa16.51■□□□□ 0.23
SGCE-202ENST00000415788 JAKMIP3Q5VZ66 844 aa16.51■□□□□ 0.23
SGCE-202ENST00000415788 MYRIPQ8NFW9 859 aa16.51■□□□□ 0.23
SGCE-202ENST00000415788 MAML3Q96JK9 1138 aa16.51■□□□□ 0.23
SGCE-202ENST00000415788 TAAR1Q96RJ0 339 aa16.51■□□□□ 0.23
SGCE-202ENST00000415788 ANO3Q9BYT9 981 aa16.51■□□□□ 0.23
SGCE-202ENST00000415788 PXMP2Q9NR77 195 aa16.51■□□□□ 0.23
SGCE-202ENST00000415788 GABRQQ9UN88 632 aa16.51■□□□□ 0.23
SGCE-202ENST00000415788 RPTORQ8N122 1335 aa16.51■□□□□ 0.23
SGCE-202ENST00000415788 SOWAHBA6NEL2 793 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 BTBD18B2RXH4 712 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 OLFML2BQ68BL8 750 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 XRRA1Q6P2D8 792 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 MAMDC4Q6UXC1 1216 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 RAET1EQ8TD07 263 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 OXER1Q8TDS5 423 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 TMEM260Q9NX78 707 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 MGAMO43451 1857 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 CCDC194A0A1B0GVG4 234 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 VPS37CA5D8V6 355 aaPredicted RBP16.5■□□□□ 0.23
SGCE-202ENST00000415788 U2AF2P26368 475 aaKnown RBP eCLIP16.5■□□□□ 0.234e-7■■□□□ 11.5
SGCE-202ENST00000415788 SREBF1P36956 1147 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 NONOQ15233 471 aaKnown RBP eCLIP16.5■□□□□ 0.23
SGCE-202ENST00000415788 CTU1Q7Z7A3 348 aaKnown RBP16.5■□□□□ 0.23
SGCE-202ENST00000415788 TMEM87AQ8NBN3 555 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 NPLOC4Q8TAT6 608 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 RASGRP4Q8TDF6 673 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 TNFRSF25Q93038 417 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 FGD4Q96M96 766 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 PDCD2LQ9BRP1 358 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 PRDM10Q9NQV6 1147 aa16.5■□□□□ 0.23
SGCE-202ENST00000415788 EDNRBP24530 442 aa16.49■□□□□ 0.23
SGCE-202ENST00000415788 NR5A1Q13285 461 aa16.49■□□□□ 0.23
SGCE-202ENST00000415788 NOSTRINQ8IVI9 506 aa16.49■□□□□ 0.23
SGCE-202ENST00000415788 MORC4Q8TE76 937 aa16.49■□□□□ 0.23
SGCE-202ENST00000415788 PXYLP1Q8TE99 480 aa16.49■□□□□ 0.23
SGCE-202ENST00000415788 PURBQ96QR8 312 aaKnown RBP16.49■□□□□ 0.23
SGCE-202ENST00000415788 PRDM4Q9UKN5 801 aa16.49■□□□□ 0.23
SGCE-202ENST00000415788 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.49■□□□□ 0.23
SGCE-202ENST00000415788 ASTN1O14525 1302 aa16.49■□□□□ 0.23
SGCE-202ENST00000415788 SYNGAP1Q96PV0 1343 aa16.49■□□□□ 0.23
SGCE-202ENST00000415788 ADAMTS3O15072 1205 aa16.48■□□□□ 0.23
SGCE-202ENST00000415788 STAM2O75886 525 aa16.48■□□□□ 0.23
SGCE-202ENST00000415788 EIF2AK2P19525 551 aaKnown RBP16.48■□□□□ 0.23
SGCE-202ENST00000415788 PGM5Q15124 567 aa16.48■□□□□ 0.23
SGCE-202ENST00000415788 PKN2Q16513 984 aaKnown RBP16.48■□□□□ 0.23
SGCE-202ENST00000415788 PCNX4Q63HM2 1172 aa16.48■□□□□ 0.23
SGCE-202ENST00000415788 MTMR6Q9Y217 621 aa16.48■□□□□ 0.23
SGCE-202ENST00000415788 NR3C2P08235 984 aa16.48■□□□□ 0.23
SGCE-202ENST00000415788 CCND2P30279 289 aa16.48■□□□□ 0.23
SGCE-202ENST00000415788 GTF2F1P35269 517 aaKnown RBP eCLIP16.48■□□□□ 0.23
SGCE-202ENST00000415788 PDE4DQ08499 809 aa16.48■□□□□ 0.23
SGCE-202ENST00000415788 STXBP2Q15833 593 aa16.48■□□□□ 0.23
SGCE-202ENST00000415788 PIK3AP1Q6ZUJ8 805 aa16.48■□□□□ 0.23
SGCE-202ENST00000415788 RNF214Q8ND24 703 aa16.48■□□□□ 0.23
SGCE-202ENST00000415788 SLAIN1Q8ND83 568 aa16.48■□□□□ 0.23
SGCE-202ENST00000415788 PGBD1Q96JS3 809 aa16.48■□□□□ 0.23
SGCE-202ENST00000415788 TINF2Q9BSI4 451 aa16.48■□□□□ 0.23
SGCE-202ENST00000415788 CCDC94Q9BW85 323 aaPredicted RBP16.48■□□□□ 0.23
SGCE-202ENST00000415788 ZSWIM8A7E2V4 1837 aa16.47■□□□□ 0.23
SGCE-202ENST00000415788 USP11P51784 963 aa16.47■□□□□ 0.23
SGCE-202ENST00000415788 ARHGAP4P98171 946 aa16.47■□□□□ 0.23
SGCE-202ENST00000415788 MFSD14CQ5VZR4 134 aa16.47■□□□□ 0.23
SGCE-202ENST00000415788 ARMCX2Q7L311 632 aa16.47■□□□□ 0.23
SGCE-202ENST00000415788 BRAPQ7Z569 592 aa16.47■□□□□ 0.23
SGCE-202ENST00000415788 TBCKQ8TEA7 893 aa16.47■□□□□ 0.23
SGCE-202ENST00000415788 PTPN22Q9Y2R2 807 aa16.47■□□□□ 0.23
SGCE-202ENST00000415788 CEP350Q5VT06 3117 aa16.47■□□□□ 0.23
SGCE-202ENST00000415788 ADCY3O60266 1144 aa16.46■□□□□ 0.23
SGCE-202ENST00000415788 IGHA2P01877 340 aa16.46■□□□□ 0.23
SGCE-202ENST00000415788 CYP3A4P08684 503 aa16.46■□□□□ 0.23
SGCE-202ENST00000415788 VSIG10LQ86VR7 867 aa16.46■□□□□ 0.23
SGCE-202ENST00000415788 CRYGNQ8WXF5 182 aa16.46■□□□□ 0.23
SGCE-202ENST00000415788 NAP1L4Q99733 375 aaKnown RBP16.46■□□□□ 0.23
SGCE-202ENST00000415788 ZSCAN16Q9H4T2 348 aaPredicted RBP16.46■□□□□ 0.23
SGCE-202ENST00000415788 NRBP1Q9UHY1 535 aa16.46■□□□□ 0.23
SGCE-202ENST00000415788 CASP8AP2Q9UKL3 1982 aa16.46■□□□□ 0.23
SGCE-202ENST00000415788 KIF28PB7ZC32 967 aa16.46■□□□□ 0.22
SGCE-202ENST00000415788 EIF3JO75822 258 aaKnown RBP16.46■□□□□ 0.22
SGCE-202ENST00000415788 TRAPPC10P48553 1259 aa16.46■□□□□ 0.22
SGCE-202ENST00000415788 CCL14Q16627 93 aa16.46■□□□□ 0.22
SGCE-202ENST00000415788 CCDC183Q5T5S1 534 aa16.46■□□□□ 0.22
SGCE-202ENST00000415788 NEK8Q86SG6 692 aa16.46■□□□□ 0.22
SGCE-202ENST00000415788 TRIB2Q92519 343 aa16.46■□□□□ 0.22
SGCE-202ENST00000415788 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.46■□□□□ 0.22
SGCE-202ENST00000415788 CNPY2Q9Y2B0 182 aa16.46■□□□□ 0.22
SGCE-202ENST00000415788 PTCH2Q9Y6C5 1203 aa16.46■□□□□ 0.22
SGCE-202ENST00000415788 HMGCRP04035 888 aa16.45■□□□□ 0.22
SGCE-202ENST00000415788 ZSCAN22P10073 491 aaPredicted RBP16.45■□□□□ 0.22
SGCE-202ENST00000415788 MYCLP12524 364 aaPredicted RBP16.45■□□□□ 0.22
SGCE-202ENST00000415788 UBXN2AP68543 259 aa16.45■□□□□ 0.22
SGCE-202ENST00000415788 INF2Q27J81 1249 aa16.45■□□□□ 0.22
SGCE-202ENST00000415788 MOXD1Q6UVY6 613 aa16.45■□□□□ 0.22
SGCE-202ENST00000415788 ABHD16BQ9H3Z7 469 aa16.45■□□□□ 0.22
SGCE-202ENST00000415788 FLRT1Q9NZU1 646 aa16.45■□□□□ 0.22
SGCE-202ENST00000415788 GCFC2P16383 781 aaKnown RBP16.44■□□□□ 0.22
SGCE-202ENST00000415788 GRK4P32298 578 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms