RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 CYTH3O43739 400 aa11.16□□□□□ -0.62
LINC01090-201ENST00000415357 DUSP11O75319 330 aaKnown RBP11.16□□□□□ -0.62
LINC01090-201ENST00000415357 C6orf222P0C671 652 aaPredicted RBP11.16□□□□□ -0.62
LINC01090-201ENST00000415357 RXRAP19793 462 aa11.16□□□□□ -0.62
LINC01090-201ENST00000415357 MCM5P33992 734 aa11.16□□□□□ -0.62
LINC01090-201ENST00000415357 PDE4DQ08499 809 aa11.16□□□□□ -0.62
LINC01090-201ENST00000415357 CATIPQ7Z7H3 387 aa11.16□□□□□ -0.62
LINC01090-201ENST00000415357 ZNF654Q8IZM8 581 aa11.16□□□□□ -0.62
LINC01090-201ENST00000415357 RDH13Q8NBN7 331 aa11.16□□□□□ -0.62
LINC01090-201ENST00000415357 MORC4Q8TE76 937 aa11.16□□□□□ -0.62
LINC01090-201ENST00000415357 PIBF1Q8WXW3 757 aa11.16□□□□□ -0.62
LINC01090-201ENST00000415357 MTMR8Q96EF0 704 aa11.16□□□□□ -0.62
LINC01090-201ENST00000415357 TCEANC2Q96MN5 208 aa11.16□□□□□ -0.62
LINC01090-201ENST00000415357 PIGSQ96S52 555 aa11.16□□□□□ -0.62
LINC01090-201ENST00000415357 COL20A1Q9P218 1284 aa11.16□□□□□ -0.62
LINC01090-201ENST00000415357 HCSTQ9UBK5 93 aa11.16□□□□□ -0.62
LINC01090-201ENST00000415357 ADD3Q9UEY8 706 aaKnown RBP11.16□□□□□ -0.62
LINC01090-201ENST00000415357 PNMA2Q9UL42 364 aa11.16□□□□□ -0.62
LINC01090-201ENST00000415357 PHF24Q9UPV7 400 aa11.16□□□□□ -0.62
LINC01090-201ENST00000415357 MYH6P13533 1939 aa11.15□□□□□ -0.62
LINC01090-201ENST00000415357 A0A1W2PQ45 241 aaPredicted RBP11.15□□□□□ -0.62
LINC01090-201ENST00000415357 A0A1W2PQY0 241 aa11.15□□□□□ -0.62
LINC01090-201ENST00000415357 OPLAHO14841 1288 aa11.15□□□□□ -0.62
LINC01090-201ENST00000415357 SMPD1P17405 629 aa11.15□□□□□ -0.62
LINC01090-201ENST00000415357 BEX3Q00994 111 aa11.15□□□□□ -0.62
LINC01090-201ENST00000415357 TNFAIP2Q03169 654 aa11.15□□□□□ -0.62
LINC01090-201ENST00000415357 KCNA10Q16322 511 aa11.15□□□□□ -0.62
LINC01090-201ENST00000415357 ADCK5Q3MIX3 580 aa11.15□□□□□ -0.62
LINC01090-201ENST00000415357 TRIM60Q495X7 471 aa11.15□□□□□ -0.62
LINC01090-201ENST00000415357 TAPT1Q6NXT6 567 aa11.15□□□□□ -0.62
LINC01090-201ENST00000415357 SLC39A5Q6ZMH5 540 aa11.15□□□□□ -0.62
LINC01090-201ENST00000415357 NFXL1Q6ZNB6 911 aa11.15□□□□□ -0.62
LINC01090-201ENST00000415357 NOL8Q76FK4 1167 aaKnown RBP11.15□□□□□ -0.62
LINC01090-201ENST00000415357 PARP9Q8IXQ6 854 aa11.15□□□□□ -0.62
LINC01090-201ENST00000415357 KLHDC9Q8NEP7 349 aa11.15□□□□□ -0.62
LINC01090-201ENST00000415357 SYTL5Q8TDW5 730 aaPredicted RBP11.15□□□□□ -0.62
LINC01090-201ENST00000415357 PRO3102Q9H379 93 aa11.15□□□□□ -0.62
LINC01090-201ENST00000415357 PPP4R2Q9NY27 417 aa11.15□□□□□ -0.62
LINC01090-201ENST00000415357 CCDC69A6NI79 296 aa11.14□□□□□ -0.63
LINC01090-201ENST00000415357 ZBTB5O15062 677 aa11.14□□□□□ -0.63
LINC01090-201ENST00000415357 CTAGE5O15320 804 aa11.14□□□□□ -0.63
LINC01090-201ENST00000415357 DDAH1O94760 285 aa11.14□□□□□ -0.63
LINC01090-201ENST00000415357 PLEKHA8P1O95397 391 aa11.14□□□□□ -0.63
LINC01090-201ENST00000415357 CENPBP07199 599 aaPredicted RBP11.14□□□□□ -0.63
LINC01090-201ENST00000415357 MAGEA10P43363 369 aaPredicted RBP11.14□□□□□ -0.63
LINC01090-201ENST00000415357 ACLYP53396 1101 aa11.14□□□□□ -0.63
LINC01090-201ENST00000415357 GJA9P57773 515 aa11.14□□□□□ -0.63
LINC01090-201ENST00000415357 SNX17Q15036 470 aa11.14□□□□□ -0.63
LINC01090-201ENST00000415357 RNF20Q5VTR2 975 aa11.14□□□□□ -0.63
LINC01090-201ENST00000415357 CCSAPQ6IQ19 270 aaPredicted RBP11.14□□□□□ -0.63
LINC01090-201ENST00000415357 TLK2Q86UE8 772 aa11.14□□□□□ -0.63
LINC01090-201ENST00000415357 CMTR1Q8N1G2 835 aaKnown RBP11.14□□□□□ -0.63
LINC01090-201ENST00000415357 TMEM87BQ96K49 555 aa11.14□□□□□ -0.63
LINC01090-201ENST00000415357 NEK1Q96PY6 1258 aa11.14□□□□□ -0.63
LINC01090-201ENST00000415357 TAAR1Q96RJ0 339 aa11.14□□□□□ -0.63
LINC01090-201ENST00000415357 AMNQ9BXJ7 453 aa11.14□□□□□ -0.63
LINC01090-201ENST00000415357 UPF3AQ9H1J1 476 aaKnown RBP11.14□□□□□ -0.63
LINC01090-201ENST00000415357 RIOX1Q9H6W3 641 aa11.14□□□□□ -0.63
LINC01090-201ENST00000415357 VTA1Q9NP79 307 aa11.14□□□□□ -0.63
LINC01090-201ENST00000415357 GNEQ9Y223 722 aaKnown RBP11.14□□□□□ -0.63
LINC01090-201ENST00000415357 MRPL11Q9Y3B7 192 aaKnown RBP11.14□□□□□ -0.63
LINC01090-201ENST00000415357 DYNC1LI2O43237 492 aaPredicted RBP11.13□□□□□ -0.63
LINC01090-201ENST00000415357 CFBP00751 764 aa11.13□□□□□ -0.63
LINC01090-201ENST00000415357 ASGR1P07306 291 aa11.13□□□□□ -0.63
LINC01090-201ENST00000415357 CPA1P15085 419 aa11.13□□□□□ -0.63
LINC01090-201ENST00000415357 EDNRBP24530 442 aa11.13□□□□□ -0.63
LINC01090-201ENST00000415357 CST5P28325 142 aaPredicted RBP11.13□□□□□ -0.63
LINC01090-201ENST00000415357 GNASQ5JWF2 1037 aa11.13□□□□□ -0.63
LINC01090-201ENST00000415357 RGS22Q8NE09 1264 aa11.13□□□□□ -0.63
LINC01090-201ENST00000415357 CTCFLQ8NI51 663 aaPredicted RBP11.13□□□□□ -0.63
LINC01090-201ENST00000415357 GDF15Q99988 308 aa11.13□□□□□ -0.63
LINC01090-201ENST00000415357 TSEN34Q9BSV6 310 aaKnown RBP11.13□□□□□ -0.63
LINC01090-201ENST00000415357 MTA3Q9BTC8 594 aa11.13□□□□□ -0.63
LINC01090-201ENST00000415357 SPC25Q9HBM1 224 aa11.13□□□□□ -0.63
LINC01090-201ENST00000415357 PRDM5Q9NQX1 630 aaPredicted RBP11.13□□□□□ -0.63
LINC01090-201ENST00000415357 STARD7Q9NQZ5 370 aa11.13□□□□□ -0.63
LINC01090-201ENST00000415357 PCDHA1Q9Y5I3 950 aa11.13□□□□□ -0.63
LINC01090-201ENST00000415357 BAZ2BQ9UIF8 2168 aaKnown RBP11.13□□□□□ -0.63
LINC01090-201ENST00000415357 MOXD2PA6NHM9 499 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 PQBP1O60828 265 aaKnown RBP11.12□□□□□ -0.63
LINC01090-201ENST00000415357 CFHP08603 1231 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 EIF2AK2P19525 551 aaKnown RBP11.12□□□□□ -0.63
LINC01090-201ENST00000415357 HOXA13P31271 388 aaPredicted RBP11.12□□□□□ -0.63
LINC01090-201ENST00000415357 LIFRP42702 1097 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 TLE2Q04725 743 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 IQSEC1Q6DN90 963 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 SH3RF1Q7Z6J0 888 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 MICU3Q86XE3 530 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 MCF2L2Q86YR7 1114 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 SRBD1Q8N5C6 995 aaKnown RBP11.12□□□□□ -0.63
LINC01090-201ENST00000415357 DNERQ8NFT8 737 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 COPS5Q92905 334 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 RMDN3Q96TC7 470 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 TMUB1Q9BVT8 246 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 WDR11Q9BZH6 1224 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 PDLIM7Q9NR12 457 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 TRIOBPQ9H2D6 2365 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 LAMA3Q16787 3333 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 LTBP2Q14767 1821 aa11.12□□□□□ -0.63
LINC01090-201ENST00000415357 LOC102724159A0A0B4J2E5 919 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms