RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 CCER2I3L3R5 266 aa18.76■□□□□ 0.59
CPNE1-208ENST00000414711 GTF2F1P35269 517 aaKnown RBP eCLIP18.76■□□□□ 0.592e-12■□□□□ 10
CPNE1-208ENST00000414711 NBL1P41271 181 aa18.76■□□□□ 0.59
CPNE1-208ENST00000414711 BAATQ14032 418 aaPredicted RBP18.76■□□□□ 0.59
CPNE1-208ENST00000414711 ZNF618Q5T7W0 954 aa18.76■□□□□ 0.59
CPNE1-208ENST00000414711 CLUAP1Q96AJ1 413 aa18.76■□□□□ 0.59
CPNE1-208ENST00000414711 GTF2IRD1Q9UHL9 959 aa18.76■□□□□ 0.59
CPNE1-208ENST00000414711 EMSYQ7Z589 1322 aa18.75■□□□□ 0.59
CPNE1-208ENST00000414711 IPO8O15397 1037 aaKnown RBP18.75■□□□□ 0.59
CPNE1-208ENST00000414711 LINC01565O15544 149 aa18.75■□□□□ 0.59
CPNE1-208ENST00000414711 GALR2O43603 387 aaPredicted RBP18.75■□□□□ 0.59
CPNE1-208ENST00000414711 KRT37O76014 449 aa18.75■□□□□ 0.59
CPNE1-208ENST00000414711 RGS20O76081 388 aa18.75■□□□□ 0.59
CPNE1-208ENST00000414711 CTNNB1P35222 781 aa18.75■□□□□ 0.59
CPNE1-208ENST00000414711 PTK7Q13308 1070 aa18.75■□□□□ 0.59
CPNE1-208ENST00000414711 CBX2Q14781 532 aaPredicted RBP18.75■□□□□ 0.59
CPNE1-208ENST00000414711 ERC1Q8IUD2 1116 aa18.75■□□□□ 0.59
CPNE1-208ENST00000414711 DBF4BQ8NFT6 615 aa18.75■□□□□ 0.59
CPNE1-208ENST00000414711 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.75■□□□□ 0.594e-7■■■■■ 43.8
CPNE1-208ENST00000414711 LMAN2LQ9H0V9 348 aa18.75■□□□□ 0.59
CPNE1-208ENST00000414711 IGFLR1Q9H665 355 aa18.75■□□□□ 0.59
CPNE1-208ENST00000414711 MED19A0JLT2 244 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-208ENST00000414711 EYA4O95677 639 aa18.74■□□□□ 0.59
CPNE1-208ENST00000414711 CHGBP05060 677 aa18.74■□□□□ 0.59
CPNE1-208ENST00000414711 MMP3P08254 477 aa18.74■□□□□ 0.59
CPNE1-208ENST00000414711 TXNP10599 105 aaKnown RBP18.74■□□□□ 0.59
CPNE1-208ENST00000414711 SLC1A4P43007 532 aa18.74■□□□□ 0.59
CPNE1-208ENST00000414711 NDUFV1P49821 464 aa18.74■□□□□ 0.59
CPNE1-208ENST00000414711 PDE4BQ07343 736 aa18.74■□□□□ 0.59
CPNE1-208ENST00000414711 PDE4DQ08499 809 aa18.74■□□□□ 0.59
CPNE1-208ENST00000414711 TRIM71Q2Q1W2 868 aaKnown RBP18.74■□□□□ 0.59
CPNE1-208ENST00000414711 SBK1Q52WX2 424 aa18.74■□□□□ 0.59
CPNE1-208ENST00000414711 KAT2BQ92831 832 aa18.74■□□□□ 0.59
CPNE1-208ENST00000414711 WNT8BQ93098 351 aa18.74■□□□□ 0.59
CPNE1-208ENST00000414711 CHMP4CQ96CF2 233 aa18.74■□□□□ 0.59
CPNE1-208ENST00000414711 GMCL1Q96IK5 515 aa18.74■□□□□ 0.59
CPNE1-208ENST00000414711 MSLNLQ96KJ4 702 aa18.74■□□□□ 0.59
CPNE1-208ENST00000414711 C11orf84Q9BUA3 381 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-208ENST00000414711 DMDP11532 3685 aa18.74■□□□□ 0.59
CPNE1-208ENST00000414711 GRM6O15303 877 aa18.73■□□□□ 0.59
CPNE1-208ENST00000414711 C7orf31Q8N865 590 aa18.73■□□□□ 0.59
CPNE1-208ENST00000414711 SMRP1Q8NCR6 262 aa18.73■□□□□ 0.59
CPNE1-208ENST00000414711 AFG1LQ8WV93 481 aa18.73■□□□□ 0.59
CPNE1-208ENST00000414711 IL1RAPL2Q9NP60 686 aa18.73■□□□□ 0.59
CPNE1-208ENST00000414711 PAG1Q9NWQ8 432 aa18.73■□□□□ 0.59
CPNE1-208ENST00000414711 HDAC6Q9UBN7 1215 aa18.73■□□□□ 0.59
CPNE1-208ENST00000414711 EXOC6BQ9Y2D4 811 aa18.73■□□□□ 0.59
CPNE1-208ENST00000414711 NCOR2Q9Y618 2525 aa18.73■□□□□ 0.59
CPNE1-208ENST00000414711 PLIN4Q96Q06 1357 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 VPS13AQ96RL7 3174 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 PTPDC1A2A3K4 754 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 MINDY4BA8MYZ0 360 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 C5orf67F2Z3F1 127 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 NFIBO00712 420 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 PLA2G6O60733 806 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 PRDM1O75626 825 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 UPP2O95045 317 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 CSPG5O95196 566 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 ARIH2O95376 493 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 ICAM1P05362 532 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 SLC30A10Q6XR72 485 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 ADSSL1Q8N142 457 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 TMEM57Q8N5G2 664 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 NKD2Q969F2 451 aaPredicted RBP18.72■□□□□ 0.59
CPNE1-208ENST00000414711 TOP1MTQ969P6 601 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 MPHOSPH6Q99547 160 aaKnown RBP18.72■□□□□ 0.59
CPNE1-208ENST00000414711 INCENPQ9NQS7 918 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 PRR12Q9ULL5 1215 aa18.72■□□□□ 0.59
CPNE1-208ENST00000414711 MCCP23508 829 aa18.71■□□□□ 0.59
CPNE1-208ENST00000414711 EDNRBP24530 442 aa18.71■□□□□ 0.59
CPNE1-208ENST00000414711 CALML3P27482 149 aa18.71■□□□□ 0.59
CPNE1-208ENST00000414711 ADAM15Q13444 863 aa18.71■□□□□ 0.59
CPNE1-208ENST00000414711 UBE3CQ15386 1083 aa18.71■□□□□ 0.59
CPNE1-208ENST00000414711 KCTD1Q719H9 257 aa18.71■□□□□ 0.59
CPNE1-208ENST00000414711 ZNF444Q8N0Y2 327 aaPredicted RBP18.71■□□□□ 0.59
CPNE1-208ENST00000414711 FRAT1Q92837 279 aaPredicted RBP18.71■□□□□ 0.59
CPNE1-208ENST00000414711 IFIH1Q9BYX4 1025 aaKnown RBP18.71■□□□□ 0.59
CPNE1-208ENST00000414711 KMT2BQ9UMN6 2715 aaPredicted RBP18.71■□□□□ 0.59
CPNE1-208ENST00000414711 CACNA1GO43497 2377 aa18.7■□□□□ 0.58
CPNE1-208ENST00000414711 PDGFBP01127 241 aaPredicted RBP18.7■□□□□ 0.58
CPNE1-208ENST00000414711 RB1P06400 928 aa18.7■□□□□ 0.58
CPNE1-208ENST00000414711 ICAM3P32942 547 aa18.7■□□□□ 0.58
CPNE1-208ENST00000414711 RRP1P56182 461 aaKnown RBP18.7■□□□□ 0.58
CPNE1-208ENST00000414711 PLEKHG4Q58EX7 1191 aa18.7■□□□□ 0.58
CPNE1-208ENST00000414711 PUS7LQ9H0K6 701 aaKnown RBP18.7■□□□□ 0.58
CPNE1-208ENST00000414711 ZNF287Q9HBT7 754 aa18.7■□□□□ 0.58
CPNE1-208ENST00000414711 MMP1P03956 469 aa18.69■□□□□ 0.58
CPNE1-208ENST00000414711 CASTP20810 708 aaKnown RBP18.69■□□□□ 0.58
CPNE1-208ENST00000414711 COASYQ13057 564 aa18.69■□□□□ 0.58
CPNE1-208ENST00000414711 PTPN21Q16825 1174 aa18.69■□□□□ 0.58
CPNE1-208ENST00000414711 MCTP2Q6DN12 878 aa18.69■□□□□ 0.58
CPNE1-208ENST00000414711 FRMD5Q7Z6J6 570 aa18.69■□□□□ 0.58
CPNE1-208ENST00000414711 FIBCD1Q8N539 461 aa18.69■□□□□ 0.58
CPNE1-208ENST00000414711 RPGRIP1Q96KN7 1286 aa18.69■□□□□ 0.58
CPNE1-208ENST00000414711 ALG1Q9BT22 464 aa18.69■□□□□ 0.58
CPNE1-208ENST00000414711 KATNAL1Q9BW62 490 aa18.69■□□□□ 0.58
CPNE1-208ENST00000414711 PHF7Q9BWX1 381 aaPredicted RBP18.69■□□□□ 0.58
CPNE1-208ENST00000414711 CLEC1BQ9P126 229 aa18.69■□□□□ 0.58
CPNE1-208ENST00000414711 RWDD3Q9Y3V2 267 aa18.69■□□□□ 0.58
CPNE1-208ENST00000414711 USP15Q9Y4E8 981 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms