RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 NECAB2Q7Z6G3 386 aa27.35■■□□□ 1.97
UBE2E3-202ENST00000410062 GLT8D2Q9H1C3 349 aa27.35■■□□□ 1.97
UBE2E3-202ENST00000410062 STK36Q9NRP7 1315 aa27.34■■□□□ 1.97
UBE2E3-202ENST00000410062 DNAH12Q6ZR08 3092 aa27.34■■□□□ 1.97
UBE2E3-202ENST00000410062 MYADML2A6NDP7 307 aa27.34■■□□□ 1.97
UBE2E3-202ENST00000410062 ARIH2O95376 493 aa27.34■■□□□ 1.97
UBE2E3-202ENST00000410062 MRPS9P82933 396 aaKnown RBP27.34■■□□□ 1.97
UBE2E3-202ENST00000410062 DUSP28Q4G0W2 176 aa27.34■■□□□ 1.97
UBE2E3-202ENST00000410062 RNF180Q86T96 592 aa27.34■■□□□ 1.97
UBE2E3-202ENST00000410062 TLK2Q86UE8 772 aa27.34■■□□□ 1.97
UBE2E3-202ENST00000410062 CCDC83Q8IWF9 413 aa27.34■■□□□ 1.97
UBE2E3-202ENST00000410062 NSUN7Q8NE18 718 aaKnown RBP27.34■■□□□ 1.97
UBE2E3-202ENST00000410062 CCDC148Q8NFR7 591 aa27.34■■□□□ 1.97
UBE2E3-202ENST00000410062 ZSCAN31Q96LW9 406 aaPredicted RBP27.34■■□□□ 1.97
UBE2E3-202ENST00000410062 SH3GLB2Q9NR46 395 aa27.34■■□□□ 1.97
UBE2E3-202ENST00000410062 DYNC1LI2O43237 492 aaPredicted RBP27.33■■□□□ 1.97
UBE2E3-202ENST00000410062 RGS20O76081 388 aa27.33■■□□□ 1.97
UBE2E3-202ENST00000410062 CD2BP2O95400 341 aaKnown RBP27.33■■□□□ 1.97
UBE2E3-202ENST00000410062 C6orf222P0C671 652 aaPredicted RBP27.33■■□□□ 1.97
UBE2E3-202ENST00000410062 CLK2P49760 499 aaKnown RBP27.33■■□□□ 1.97
UBE2E3-202ENST00000410062 C11orf49Q9H6J7 331 aa27.33■■□□□ 1.97
UBE2E3-202ENST00000410062 ORC3Q9UBD5 711 aaPredicted RBP27.33■■□□□ 1.97
UBE2E3-202ENST00000410062 KBTBD13C9JR72 458 aa27.32■■□□□ 1.96
UBE2E3-202ENST00000410062 JAK2O60674 1132 aa27.32■■□□□ 1.96
UBE2E3-202ENST00000410062 TXNP10599 105 aaKnown RBP27.32■■□□□ 1.96
UBE2E3-202ENST00000410062 GJA9P57773 515 aa27.32■■□□□ 1.96
UBE2E3-202ENST00000410062 TTLL4Q14679 1199 aa27.32■■□□□ 1.96
UBE2E3-202ENST00000410062 JAKMIP3Q5VZ66 844 aa27.32■■□□□ 1.96
UBE2E3-202ENST00000410062 COPS5Q92905 334 aa27.32■■□□□ 1.96
UBE2E3-202ENST00000410062 UPF3AQ9H1J1 476 aaKnown RBP27.32■■□□□ 1.96
UBE2E3-202ENST00000410062 RTEL1Q9NZ71 1219 aa27.32■■□□□ 1.96
UBE2E3-202ENST00000410062 FDPSP14324 419 aaKnown RBP27.31■■□□□ 1.96
UBE2E3-202ENST00000410062 GNA11P29992 359 aa27.31■■□□□ 1.96
UBE2E3-202ENST00000410062 NLRP5P59047 1200 aa27.31■■□□□ 1.96
UBE2E3-202ENST00000410062 LY6KQ17RY6 165 aa27.31■■□□□ 1.96
UBE2E3-202ENST00000410062 PCNX4Q63HM2 1172 aa27.31■■□□□ 1.96
UBE2E3-202ENST00000410062 CCDC62Q6P9F0 684 aa27.31■■□□□ 1.96
UBE2E3-202ENST00000410062 TEX2Q8IWB9 1127 aa27.31■■□□□ 1.96
UBE2E3-202ENST00000410062 KLHDC9Q8NEP7 349 aa27.31■■□□□ 1.96
UBE2E3-202ENST00000410062 SPC25Q9HBM1 224 aa27.31■■□□□ 1.96
UBE2E3-202ENST00000410062 FOSP01100 380 aaPredicted RBP27.31■■□□□ 1.96
UBE2E3-202ENST00000410062 COL6A1P12109 1028 aa27.31■■□□□ 1.96
UBE2E3-202ENST00000410062 ANO3Q9BYT9 981 aa27.31■■□□□ 1.96
UBE2E3-202ENST00000410062 AP5M1Q9H0R1 490 aa27.31■■□□□ 1.96
UBE2E3-202ENST00000410062 SH2B1Q9NRF2 756 aaPredicted RBP27.31■■□□□ 1.96
UBE2E3-202ENST00000410062 MRVI1Q9Y6F6 885 aa27.31■■□□□ 1.96
UBE2E3-202ENST00000410062 CTAGE5O15320 804 aa27.3■■□□□ 1.96
UBE2E3-202ENST00000410062 BEX3Q00994 111 aa27.3■■□□□ 1.96
UBE2E3-202ENST00000410062 AP3B2Q13367 1082 aa27.3■■□□□ 1.96
UBE2E3-202ENST00000410062 REXO1Q8N1G1 1221 aaKnown RBP27.3■■□□□ 1.96
UBE2E3-202ENST00000410062 RASGRP4Q8TDF6 673 aa27.3■■□□□ 1.96
UBE2E3-202ENST00000410062 SENP6Q9GZR1 1112 aaPredicted RBP27.3■■□□□ 1.96
UBE2E3-202ENST00000410062 EHMT1Q9H9B1 1298 aa27.3■■□□□ 1.96
UBE2E3-202ENST00000410062 Q9Y3F1 56 aa27.3■■□□□ 1.96
UBE2E3-202ENST00000410062 KCNA10Q16322 511 aa27.29■■□□□ 1.96
UBE2E3-202ENST00000410062 GNASQ5JWF2 1037 aa27.29■■□□□ 1.96
UBE2E3-202ENST00000410062 FERMT2Q96AC1 680 aa27.29■■□□□ 1.96
UBE2E3-202ENST00000410062 GJB4Q9NTQ9 266 aa27.29■■□□□ 1.96
UBE2E3-202ENST00000410062 STAM2O75886 525 aa27.28■■□□□ 1.96
UBE2E3-202ENST00000410062 CCSAPQ6IQ19 270 aaPredicted RBP27.28■■□□□ 1.96
UBE2E3-202ENST00000410062 XRRA1Q6P2D8 792 aa27.28■■□□□ 1.96
UBE2E3-202ENST00000410062 IL27Q8NEV9 243 aa27.28■■□□□ 1.96
UBE2E3-202ENST00000410062 OR6J1Q8NGC5 347 aa27.28■■□□□ 1.96
UBE2E3-202ENST00000410062 BICD2Q8TD16 824 aa27.28■■□□□ 1.96
UBE2E3-202ENST00000410062 ALG1Q9BT22 464 aa27.28■■□□□ 1.96
UBE2E3-202ENST00000410062 DDX41Q9UJV9 622 aaKnown RBP27.28■■□□□ 1.96
UBE2E3-202ENST00000410062 KCNJ14Q9UNX9 436 aa27.28■■□□□ 1.96
UBE2E3-202ENST00000410062 NKRFO15226 690 aaKnown RBP eCLIP27.27■■□□□ 1.96
UBE2E3-202ENST00000410062 CST5P28325 142 aaPredicted RBP27.27■■□□□ 1.96
UBE2E3-202ENST00000410062 FSCN1Q16658 493 aaKnown RBP27.27■■□□□ 1.96
UBE2E3-202ENST00000410062 WASF1Q92558 559 aa27.27■■□□□ 1.96
UBE2E3-202ENST00000410062 INPP4AQ96PE3 977 aaPredicted RBP27.27■■□□□ 1.96
UBE2E3-202ENST00000410062 NKX3-2P78367 333 aa27.26■■□□□ 1.96
UBE2E3-202ENST00000410062 GNPTABQ3T906 1256 aa27.26■■□□□ 1.96
UBE2E3-202ENST00000410062 PCDHA4Q9UN74 947 aa27.26■■□□□ 1.96
UBE2E3-202ENST00000410062 PHF24Q9UPV7 400 aa27.26■■□□□ 1.96
UBE2E3-202ENST00000410062 ACLYP53396 1101 aa27.26■■□□□ 1.95
UBE2E3-202ENST00000410062 TSEN34Q9BSV6 310 aaKnown RBP27.26■■□□□ 1.95
UBE2E3-202ENST00000410062 ASGR1P07306 291 aa27.25■■□□□ 1.95
UBE2E3-202ENST00000410062 XBP1P17861 261 aa27.25■■□□□ 1.95
UBE2E3-202ENST00000410062 SREBF1P36956 1147 aa27.25■■□□□ 1.95
UBE2E3-202ENST00000410062 SP2Q02086 613 aa27.25■■□□□ 1.95
UBE2E3-202ENST00000410062 NPY5RQ15761 445 aa27.25■■□□□ 1.95
UBE2E3-202ENST00000410062 PCSK9Q8NBP7 692 aaKnown RBP27.25■■□□□ 1.95
UBE2E3-202ENST00000410062 TMX3Q96JJ7 454 aa27.25■■□□□ 1.95
UBE2E3-202ENST00000410062 LLPHQ9BRT6 129 aaKnown RBP27.25■■□□□ 1.95
UBE2E3-202ENST00000410062 HTATIP2Q9BUP3 242 aa27.25■■□□□ 1.95
UBE2E3-202ENST00000410062 PHF20Q9BVI0 1012 aa27.25■■□□□ 1.95
UBE2E3-202ENST00000410062 SORBS3O60504 671 aa27.24■■□□□ 1.95
UBE2E3-202ENST00000410062 GH1P01241 217 aa27.24■■□□□ 1.95
UBE2E3-202ENST00000410062 ITGB5P18084 799 aa27.24■■□□□ 1.95
UBE2E3-202ENST00000410062 ATN1P54259 1190 aaPredicted RBP27.24■■□□□ 1.95
UBE2E3-202ENST00000410062 ARHGAP1Q07960 439 aa27.24■■□□□ 1.95
UBE2E3-202ENST00000410062 SEMA3FQ13275 785 aa27.24■■□□□ 1.95
UBE2E3-202ENST00000410062 MCTP2Q6DN12 878 aa27.24■■□□□ 1.95
UBE2E3-202ENST00000410062 KCNV1Q6PIU1 500 aa27.24■■□□□ 1.95
UBE2E3-202ENST00000410062 BLIDQ8IZY5 108 aa27.24■■□□□ 1.95
UBE2E3-202ENST00000410062 FAM177A1Q8N128 213 aaPredicted RBP27.24■■□□□ 1.95
UBE2E3-202ENST00000410062 A0A1W2PQ45 241 aaPredicted RBP27.23■■□□□ 1.95
UBE2E3-202ENST00000410062 A0A1W2PQY0 241 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms