RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 SHTN1A0MZ66 631 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 FMNL1O95466 1100 aaPredicted RBP3.55□□□□□ -1.84
RGPD3-202ENST00000409886 FGFR1P11362 822 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 ATP2B1P20020 1258 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 USP5P45974 858 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 RFX5P48382 616 aaPredicted RBP3.55□□□□□ -1.84
RGPD3-202ENST00000409886 CASP8Q14790 479 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 NTRK3Q16288 839 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 CSPP1Q1MSJ5 1256 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 CNNM3Q8NE01 707 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 PRSS33Q8NF86 280 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 OLIG1Q8TAK6 271 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 TIFAQ96CG3 184 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 CCDC85AQ96PX6 553 aaPredicted RBP3.55□□□□□ -1.84
RGPD3-202ENST00000409886 CNOT8Q9UFF9 292 aaKnown RBP3.55□□□□□ -1.84
RGPD3-202ENST00000409886 HPSEQ9Y251 543 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 MAP3K15Q6ZN16 1313 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 CCL15-CCL14A0A0B4J2E2 113 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 CCL15Q16663 113 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 WASHC4Q2M389 1173 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 SGSM1Q2NKQ1 1148 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 MAP9Q49MG5 647 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 TLDC1Q6P9B6 456 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 PODNQ7Z5L7 613 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 DDX42Q86XP3 938 aaKnown RBP eCLIP3.55□□□□□ -1.84
RGPD3-202ENST00000409886 EPSTI1Q96J88 318 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 SH3GL2Q99962 352 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 AGXT2Q9BYV1 514 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 FAM204AQ9H8W3 233 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 GEMIN8Q9NWZ8 242 aaKnown RBP3.55□□□□□ -1.84
RGPD3-202ENST00000409886 PCDHGB4Q9UN71 923 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 PCDHGB5Q9Y5G0 923 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 ADGRG1Q9Y653 693 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 RPS6KL1Q9Y6S9 549 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 KIF26BQ2KJY2 2108 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 CCDC88CQ9P219 2028 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 A0A1B0GUL7 405 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 MSCO60682 206 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 ECHS1P30084 290 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 PBX1P40424 430 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 ERFP50548 548 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 ESPL1Q14674 2120 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 LEXMQ3ZCV2 418 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 NOL9Q5SY16 702 aaKnown RBP3.55□□□□□ -1.84
RGPD3-202ENST00000409886 SPICE1Q8N0Z3 855 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 LRRCC1Q9C099 1032 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 ZNF576Q9H609 170 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 RAB21Q9UL25 225 aa3.55□□□□□ -1.84
RGPD3-202ENST00000409886 KRT37O76014 449 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 PSMC4P43686 418 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 INHBCP55103 352 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 GUCY1A3Q02108 690 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 TYW1BQ6NUM6 668 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 SLC35F6Q8N357 371 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 SEMA4AQ9H3S1 761 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 PRKAG2Q9UGJ0 569 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 ANK3Q12955 4377 aaKnown RBP3.54□□□□□ -1.84
RGPD3-202ENST00000409886 NPHP3-ACAD11A0A0J9YXS1 232 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 USP17L3A6NCW0 530 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 USP17L4A6NCW7 530 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 EXOSC10Q01780 885 aaKnown RBP3.54□□□□□ -1.84
RGPD3-202ENST00000409886 PPP2R5AQ15172 486 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 FOXB2Q5VYV0 432 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 Q6ZUG5 572 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 USP17L1Q7RTZ2 530 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 RIN3Q8TB24 985 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 ZNF384Q8TF68 577 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 RASSF4Q9H2L5 321 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 BIN2Q9UBW5 565 aaPredicted RBP3.54□□□□□ -1.84
RGPD3-202ENST00000409886 JAG2Q9Y219 1238 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 SIP14410 1827 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 ROS1P08922 2347 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 ELP1O95163 1332 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 BTBD18B2RXH4 712 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 KIAA0355O15063 1070 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 ATP1A1P05023 1023 aaKnown RBP3.54□□□□□ -1.84
RGPD3-202ENST00000409886 COL9A2Q14055 689 aaPredicted RBP3.54□□□□□ -1.84
RGPD3-202ENST00000409886 GRIN2CQ14957 1233 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 IL17AQ16552 155 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 PAOXQ6QHF9 649 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 SLC30A10Q6XR72 485 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 UTP4Q969X6 686 aaKnown RBP3.54□□□□□ -1.84
RGPD3-202ENST00000409886 OPTNQ96CV9 577 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 AGAP1Q9UPQ3 857 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 USP20Q9Y2K6 914 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 SH3BP1Q9Y3L3 701 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 PIEZO2Q9H5I5 2752 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 RALGAPA2Q2PPJ7 1873 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 ATP5J2-PTCD1G3V325 749 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 USP2O75604 605 aaPredicted RBP3.54□□□□□ -1.84
RGPD3-202ENST00000409886 GLI1P08151 1106 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 TMOD1P28289 359 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 PDIA3P30101 505 aaKnown RBP3.54□□□□□ -1.84
RGPD3-202ENST00000409886 ATP1A2P50993 1020 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 FANCCQ00597 558 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 TEFQ10587 303 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 E2F5Q15329 346 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 UAP1Q16222 522 aaPredicted RBP3.54□□□□□ -1.84
RGPD3-202ENST00000409886 LRRC24Q50LG9 513 aa3.54□□□□□ -1.84
RGPD3-202ENST00000409886 MYSM1Q5VVJ2 828 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms