RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 OR52Z1P0C646 297 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 BMP6P22004 513 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 HOXA7P31268 230 aaPredicted RBP8.45□□□□□ -1.06
CXCR4-202ENST00000409817 UBA7P41226 1012 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 FANCCQ00597 558 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 TRAF1Q13077 416 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 ELOAQ14241 798 aaKnown RBP8.45□□□□□ -1.06
CXCR4-202ENST00000409817 NYAP1Q6ZVC0 841 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 CCDC125Q86Z20 511 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 LRRC8AQ8IWT6 810 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 ADGRF4Q8IZF3 695 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 AGBL3Q8NEM8 1001 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 RASGRP4Q8TDF6 673 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 CUL5Q93034 780 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 GMCL1Q96IK5 515 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 ZNF830Q96NB3 372 aaPredicted RBP8.45□□□□□ -1.06
CXCR4-202ENST00000409817 RAB34Q9BZG1 259 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 XPO4Q9C0E2 1151 aaKnown RBP8.45□□□□□ -1.06
CXCR4-202ENST00000409817 UBA5Q9GZZ9 404 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 JMJD4Q9H9V9 463 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 VAT1LQ9HCJ6 419 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 DISC1Q9NRI5 854 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 FRMPD2Q68DX3 1309 aaPredicted RBP8.45□□□□□ -1.06
CXCR4-202ENST00000409817 EEF2P13639 858 aaKnown RBP8.45□□□□□ -1.06
CXCR4-202ENST00000409817 GCFC2P16383 781 aaKnown RBP8.45□□□□□ -1.06
CXCR4-202ENST00000409817 STAT6P42226 847 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 SLC1A4P43007 532 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 UBASH3AP57075 661 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 ICA1Q05084 483 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 KCNA1Q09470 495 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 TCP10Q12799 353 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 IL17AQ16552 155 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 CCDC96Q2M329 555 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 ABCB5Q2M3G0 1257 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 TMEM164Q5U3C3 297 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 ISM2Q6H9L7 571 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 PPP4R3AQ6IN85 833 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 ZFPM1Q8IX07 1006 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 LARGE2Q8N3Y3 721 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 TBCKQ8TEA7 893 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 GMLQ99445 158 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 HSD3B7Q9H2F3 369 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 IFNKQ9P0W0 207 aa8.45□□□□□ -1.06
CXCR4-202ENST00000409817 ADAMTS3O15072 1205 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 SLC26A4O43511 780 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 CCNT1O60563 726 aaKnown RBP8.44□□□□□ -1.06
CXCR4-202ENST00000409817 SERPINC1P01008 464 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 ZNF18P17022 549 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 PPP1R2P41236 205 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 AFMP43652 599 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 KCNJ6P48051 423 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 EIF6P56537 245 aaKnown RBP8.44□□□□□ -1.06
CXCR4-202ENST00000409817 KCNB1Q14721 858 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 DLGAP5Q15398 846 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 LETM2Q2VYF4 491 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 CRTC2Q53ET0 693 aaPredicted RBP8.44□□□□□ -1.06
CXCR4-202ENST00000409817 SPATA1Q5VX52 437 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 RRAGBQ5VZM2 374 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 SLFN13Q68D06 897 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 RASGRP2Q7LDG7 609 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 CACTINQ8WUQ7 758 aaKnown RBP8.44□□□□□ -1.06
CXCR4-202ENST00000409817 FAM151AQ8WW52 585 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 PRMT6Q96LA8 375 aaPredicted RBP8.44□□□□□ -1.06
CXCR4-202ENST00000409817 CTAGE1Q96RT6 745 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 CPVLQ9H3G5 476 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 TDRD3Q9H7E2 651 aaKnown RBP8.44□□□□□ -1.06
CXCR4-202ENST00000409817 KCND1Q9NSA2 647 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 NRBP1Q9UHY1 535 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 ZNRF3Q9ULT6 936 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 PCDHB9Q9Y5E1 797 aa8.44□□□□□ -1.06
CXCR4-202ENST00000409817 TPM2P07951 284 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 DPEP1P16444 411 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 KCNA3P22001 575 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 CACNB3P54284 484 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 AMPD3Q01432 767 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 ATP2B2Q01814 1243 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 NCOA4Q13772 614 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 PDIA5Q14554 519 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 TMEM266Q2M3C6 531 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 CCDC144BQ3MJ40 725 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 FILIP1Q7Z7B0 1213 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 FAM83AQ86UY5 434 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 NIM1KQ8IY84 436 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 GRAMD1CQ8IYS0 662 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 IGSF22Q8N9C0 903 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 CCDC112Q8NEF3 446 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 RASSF8Q8NHQ8 419 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 FBXO41Q8TF61 875 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 CCDC47Q96A33 483 aaKnown RBP8.43□□□□□ -1.06
CXCR4-202ENST00000409817 PRIMPOLQ96LW4 560 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 CSRNP1Q96S65 589 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 TMEM60Q9H2L4 133 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 FANCLQ9NW38 375 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 PIM2Q9P1W9 311 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 PYCARDQ9ULZ3 195 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 NFE2L3Q9Y4A8 694 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 PSMD14O00487 310 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 CDK11BP21127 795 aaKnown RBP8.43□□□□□ -1.06
CXCR4-202ENST00000409817 SFPQP23246 707 aaKnown RBP eCLIP8.43□□□□□ -1.06
CXCR4-202ENST00000409817 SPAG1Q07617 926 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms