RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 KRTAP4-6Q9BYQ5 205 aa7.93□□□□□ -1.14
LSM5-203ENST00000409782 ARHGEF4Q9NR80 690 aa7.93□□□□□ -1.14
LSM5-203ENST00000409782 STK32BQ9NY57 414 aa7.93□□□□□ -1.14
LSM5-203ENST00000409782 MRPS23Q9Y3D9 190 aaKnown RBP7.93□□□□□ -1.14
LSM5-203ENST00000409782 KDRP35968 1356 aa7.93□□□□□ -1.14
LSM5-203ENST00000409782 KAT6BQ8WYB5 2073 aa7.93□□□□□ -1.14
LSM5-203ENST00000409782 QSER1Q2KHR3 1735 aa7.92□□□□□ -1.14
LSM5-203ENST00000409782 TRAV20A0A0B4J274 112 aa7.92□□□□□ -1.14
LSM5-203ENST00000409782 CCDC194A0A1B0GVG4 234 aa7.92□□□□□ -1.14
LSM5-203ENST00000409782 RGS13O14921 159 aa7.92□□□□□ -1.14
LSM5-203ENST00000409782 FANCGO15287 622 aa7.92□□□□□ -1.14
LSM5-203ENST00000409782 GSC2O15499 205 aa7.92□□□□□ -1.14
LSM5-203ENST00000409782 PDE8AO60658 829 aa7.92□□□□□ -1.14
LSM5-203ENST00000409782 CAP2P40123 477 aa7.92□□□□□ -1.14
LSM5-203ENST00000409782 MAP7Q14244 749 aa7.92□□□□□ -1.14
LSM5-203ENST00000409782 HSP90AA2PQ14568 343 aaPredicted RBP7.92□□□□□ -1.14
LSM5-203ENST00000409782 SLC6A19Q695T7 634 aa7.92□□□□□ -1.14
LSM5-203ENST00000409782 SLC51AQ86UW1 340 aa7.92□□□□□ -1.14
LSM5-203ENST00000409782 JAMLQ86YT9 394 aa7.92□□□□□ -1.14
LSM5-203ENST00000409782 SCUBE1Q8IWY4 988 aa7.92□□□□□ -1.14
LSM5-203ENST00000409782 DHX37Q8IY37 1157 aaKnown RBP7.92□□□□□ -1.14
LSM5-203ENST00000409782 SYTL4Q96C24 671 aaPredicted RBP7.92□□□□□ -1.14
LSM5-203ENST00000409782 WDR89Q96FK6 387 aaPredicted RBP7.92□□□□□ -1.14
LSM5-203ENST00000409782 SUCOQ9UBS9 1254 aaKnown RBP7.92□□□□□ -1.14
LSM5-203ENST00000409782 PCDHB10Q9UN67 800 aa7.92□□□□□ -1.14
LSM5-203ENST00000409782 COL3A1P02461 1466 aaPredicted RBP7.92□□□□□ -1.14
LSM5-203ENST00000409782 A0A1W2PQU0 124 aa7.91□□□□□ -1.14
LSM5-203ENST00000409782 CHURC1-FNTBB4DL54 471 aa7.91□□□□□ -1.14
LSM5-203ENST00000409782 CAPNS1P04632 268 aa7.91□□□□□ -1.14
LSM5-203ENST00000409782 FGFR1P11362 822 aa7.91□□□□□ -1.14
LSM5-203ENST00000409782 MAP4P27816 1152 aaKnown RBP7.91□□□□□ -1.14
LSM5-203ENST00000409782 ASPAP45381 313 aa7.91□□□□□ -1.14
LSM5-203ENST00000409782 ID3Q02535 119 aa7.91□□□□□ -1.14
LSM5-203ENST00000409782 SGO2Q562F6 1265 aa7.91□□□□□ -1.14
LSM5-203ENST00000409782 BRDTQ58F21 947 aaPredicted RBP7.91□□□□□ -1.14
LSM5-203ENST00000409782 TRIM61Q5EBN2 209 aa7.91□□□□□ -1.14
LSM5-203ENST00000409782 PRSS36Q5K4E3 855 aa7.91□□□□□ -1.14
LSM5-203ENST00000409782 ZBTB37Q5TC79 503 aa7.91□□□□□ -1.14
LSM5-203ENST00000409782 DDX42Q86XP3 938 aaKnown RBP eCLIP7.91□□□□□ -1.14
LSM5-203ENST00000409782 AFAP1L2Q8N4X5 818 aa7.91□□□□□ -1.14
LSM5-203ENST00000409782 C8orf48Q96LL4 319 aa7.91□□□□□ -1.14
LSM5-203ENST00000409782 FAM83CQ9BQN1 747 aa7.91□□□□□ -1.14
LSM5-203ENST00000409782 AARSD1Q9BTE6 412 aaKnown RBP7.91□□□□□ -1.14
LSM5-203ENST00000409782 SUSD2Q9UGT4 822 aa7.91□□□□□ -1.14
LSM5-203ENST00000409782 KLHL3Q9UH77 587 aa7.91□□□□□ -1.14
LSM5-203ENST00000409782 G3BP2Q9UN86 482 aaKnown RBP7.91□□□□□ -1.14
LSM5-203ENST00000409782 ACTL7BQ9Y614 415 aa7.91□□□□□ -1.14
LSM5-203ENST00000409782 ITGB4P16144 1822 aa7.9□□□□□ -1.14
LSM5-203ENST00000409782 PALLDQ8WX93 1383 aa7.9□□□□□ -1.14
LSM5-203ENST00000409782 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.9□□□□□ -1.14
LSM5-203ENST00000409782 IRS4O14654 1257 aaPredicted RBP7.9□□□□□ -1.14
LSM5-203ENST00000409782 NPTXRO95502 500 aa7.9□□□□□ -1.14
LSM5-203ENST00000409782 PHKG2P15735 406 aa7.9□□□□□ -1.14
LSM5-203ENST00000409782 FSTP19883 344 aa7.9□□□□□ -1.14
LSM5-203ENST00000409782 HMGB2P26583 209 aaKnown RBP7.9□□□□□ -1.14
LSM5-203ENST00000409782 IL13P35225 146 aa7.9□□□□□ -1.14
LSM5-203ENST00000409782 SUMO1P63165 101 aaKnown RBP7.9□□□□□ -1.14
LSM5-203ENST00000409782 SLC15A2Q16348 729 aa7.9□□□□□ -1.14
LSM5-203ENST00000409782 AMOTQ4VCS5 1084 aa7.9□□□□□ -1.14
LSM5-203ENST00000409782 FOXB2Q5VYV0 432 aa7.9□□□□□ -1.14
LSM5-203ENST00000409782 IFNL2Q8IZJ0 200 aa7.9□□□□□ -1.14
LSM5-203ENST00000409782 FBLIM1Q8WUP2 373 aa7.9□□□□□ -1.14
LSM5-203ENST00000409782 IPO9Q96P70 1041 aaKnown RBP7.9□□□□□ -1.14
LSM5-203ENST00000409782 ATXN3LQ9H3M9 355 aa7.9□□□□□ -1.14
LSM5-203ENST00000409782 C7orf69Q9H7B7 122 aa7.9□□□□□ -1.14
LSM5-203ENST00000409782 SPON1Q9HCB6 807 aa7.9□□□□□ -1.14
LSM5-203ENST00000409782 PPP1R9AQ9ULJ8 1098 aa7.9□□□□□ -1.14
LSM5-203ENST00000409782 TRBV23-1A0A0A0MS06 115 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 FAM95CA0A1B0GW59 222 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 HMX2A2RU54 273 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 PRAMEF27A3QJZ7 478 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 DCDC2CA8MYV0 355 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 HSP90AB1P08238 724 aaKnown RBP7.89□□□□□ -1.15
LSM5-203ENST00000409782 CPEP16870 476 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 EPHB1P54762 984 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 ETF1P62495 437 aaKnown RBP7.89□□□□□ -1.15
LSM5-203ENST00000409782 NFKB2Q00653 900 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 PLEKHO1Q53GL0 409 aaPredicted RBP7.89□□□□□ -1.15
LSM5-203ENST00000409782 CT47A1Q5JQC4 288 aaPredicted RBP7.89□□□□□ -1.15
LSM5-203ENST00000409782 CC2D1BQ5T0F9 858 aaKnown RBP7.89□□□□□ -1.15
LSM5-203ENST00000409782 CDPF1Q6NVV7 123 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 PAOXQ6QHF9 649 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 HID1Q8IV36 788 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 FMNL3Q8IVF7 1028 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 PPM1KQ8N3J5 372 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 FAM13CQ8NE31 585 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 CCDC136Q96JN2 1154 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 TMEM87BQ96K49 555 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 CDC6Q99741 560 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 APBA2Q99767 749 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.89□□□□□ -1.15
LSM5-203ENST00000409782 PIDD1Q9HB75 910 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 CRIM1Q9NZV1 1036 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 TJP2Q9UDY2 1190 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 CCNL1Q9UK58 526 aaPredicted RBP7.89□□□□□ -1.15
LSM5-203ENST00000409782 C5P01031 1676 aa7.89□□□□□ -1.15
LSM5-203ENST00000409782 MRC1P22897 1456 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 KDM6AO15550 1401 aaPredicted RBP7.88□□□□□ -1.15
LSM5-203ENST00000409782 TUBGCP6Q96RT7 1819 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 TMPRSS2O15393 492 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms