RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 MRPS9P82933 396 aaKnown RBP18.95■□□□□ 0.62
SUMO1-208ENST00000409627 EARS2Q5JPH6 523 aaKnown RBP18.95■□□□□ 0.62
SUMO1-208ENST00000409627 MCTP1Q6DN14 999 aa18.95■□□□□ 0.62
SUMO1-208ENST00000409627 KATNBL1Q9H079 304 aa18.95■□□□□ 0.62
SUMO1-208ENST00000409627 ABHD16BQ9H3Z7 469 aa18.95■□□□□ 0.62
SUMO1-208ENST00000409627 VTA1Q9NP79 307 aa18.95■□□□□ 0.62
SUMO1-208ENST00000409627 CNPY2Q9Y2B0 182 aa18.95■□□□□ 0.62
SUMO1-208ENST00000409627 DDX49Q9Y6V7 483 aaKnown RBP18.95■□□□□ 0.62
SUMO1-208ENST00000409627 FAM205CA6NFA0 338 aa18.94■□□□□ 0.62
SUMO1-208ENST00000409627 USP11P51784 963 aa18.94■□□□□ 0.62
SUMO1-208ENST00000409627 INF2Q27J81 1249 aa18.94■□□□□ 0.62
SUMO1-208ENST00000409627 MAP3K21Q5TCX8 1036 aa18.94■□□□□ 0.62
SUMO1-208ENST00000409627 NEK8Q86SG6 692 aa18.94■□□□□ 0.62
SUMO1-208ENST00000409627 EDIL3O43854 480 aa18.93■□□□□ 0.62
SUMO1-208ENST00000409627 CIITAP33076 1130 aa18.93■□□□□ 0.62
SUMO1-208ENST00000409627 DDIT3P35638 169 aa18.93■□□□□ 0.62
SUMO1-208ENST00000409627 SLC9C1Q4G0N8 1177 aa18.93■□□□□ 0.62
SUMO1-208ENST00000409627 IPO9Q96P70 1041 aaKnown RBP18.93■□□□□ 0.62
SUMO1-208ENST00000409627 INPP4AQ96PE3 977 aaPredicted RBP18.93■□□□□ 0.62
SUMO1-208ENST00000409627 UBIAD1Q9Y5Z9 338 aa18.93■□□□□ 0.62
SUMO1-208ENST00000409627 INHAP05111 366 aa18.92■□□□□ 0.62
SUMO1-208ENST00000409627 CYBAP13498 195 aa18.92■□□□□ 0.62
SUMO1-208ENST00000409627 CACNB2Q08289 660 aaPredicted RBP18.92■□□□□ 0.62
SUMO1-208ENST00000409627 TRIM32Q13049 653 aa18.92■□□□□ 0.62
SUMO1-208ENST00000409627 RESTQ13127 1097 aa18.92■□□□□ 0.62
SUMO1-208ENST00000409627 ACVR2BQ13705 512 aa18.92■□□□□ 0.62
SUMO1-208ENST00000409627 MOXD1Q6UVY6 613 aa18.92■□□□□ 0.62
SUMO1-208ENST00000409627 BRAPQ7Z569 592 aa18.92■□□□□ 0.62
SUMO1-208ENST00000409627 FBXO16Q8IX29 292 aaPredicted RBP18.92■□□□□ 0.62
SUMO1-208ENST00000409627 NAP1L4Q99733 375 aaKnown RBP18.92■□□□□ 0.62
SUMO1-208ENST00000409627 RBM47A0AV96 593 aaKnown RBP18.91■□□□□ 0.62
SUMO1-208ENST00000409627 RGS20O76081 388 aa18.91■□□□□ 0.62
SUMO1-208ENST00000409627 ZNF865P0CJ78 1059 aaPredicted RBP18.91■□□□□ 0.62
SUMO1-208ENST00000409627 ZSCAN22P10073 491 aaPredicted RBP18.91■□□□□ 0.62
SUMO1-208ENST00000409627 PRKAR2AP13861 404 aaKnown RBP18.91■□□□□ 0.62
SUMO1-208ENST00000409627 ITGB5P18084 799 aa18.91■□□□□ 0.62
SUMO1-208ENST00000409627 ZNF76P36508 570 aa18.91■□□□□ 0.62
SUMO1-208ENST00000409627 TRAPPC10P48553 1259 aa18.91■□□□□ 0.62
SUMO1-208ENST00000409627 PKP1Q13835 747 aa18.91■□□□□ 0.62
SUMO1-208ENST00000409627 GNPTABQ3T906 1256 aa18.91■□□□□ 0.62
SUMO1-208ENST00000409627 CEP55Q53EZ4 464 aa18.91■□□□□ 0.62
SUMO1-208ENST00000409627 TAPT1Q6NXT6 567 aa18.91■□□□□ 0.62
SUMO1-208ENST00000409627 EEPD1Q7L9B9 569 aa18.91■□□□□ 0.62
SUMO1-208ENST00000409627 NIPA1Q7RTP0 329 aa18.91■□□□□ 0.62
SUMO1-208ENST00000409627 NLRX1Q86UT6 975 aa18.91■□□□□ 0.62
SUMO1-208ENST00000409627 FERMT3Q86UX7 667 aa18.91■□□□□ 0.62
SUMO1-208ENST00000409627 SH3TC2Q8TF17 1288 aa18.91■□□□□ 0.62
SUMO1-208ENST00000409627 GPRASP2Q96D09 838 aa18.91■□□□□ 0.62
SUMO1-208ENST00000409627 MXRA8Q9BRK3 442 aa18.91■□□□□ 0.62
SUMO1-208ENST00000409627 ZSCAN16Q9H4T2 348 aaPredicted RBP18.91■□□□□ 0.62
SUMO1-208ENST00000409627 ZHX1Q9UKY1 873 aaPredicted RBP18.91■□□□□ 0.62
SUMO1-208ENST00000409627 NOL7Q9UMY1 257 aaKnown RBP18.91■□□□□ 0.62
SUMO1-208ENST00000409627 FRMPD3Q5JV73 1810 aa18.9■□□□□ 0.62
SUMO1-208ENST00000409627 CYP3A7-CYP3A51PA0A087WV96 503 aa18.9■□□□□ 0.62
SUMO1-208ENST00000409627 FAM86B1E9PN63 330 aa18.9■□□□□ 0.62
SUMO1-208ENST00000409627 FAM86B2P0C5J1 330 aa18.9■□□□□ 0.62
SUMO1-208ENST00000409627 GCFC2P16383 781 aaKnown RBP18.9■□□□□ 0.62
SUMO1-208ENST00000409627 CYP3A7P24462 503 aa18.9■□□□□ 0.62
SUMO1-208ENST00000409627 ICAM3P32942 547 aa18.9■□□□□ 0.62
SUMO1-208ENST00000409627 LETM2Q2VYF4 491 aa18.9■□□□□ 0.62
SUMO1-208ENST00000409627 PRAMEF19Q5SWL8 479 aa18.9■□□□□ 0.62
SUMO1-208ENST00000409627 PPP4R3AQ6IN85 833 aa18.9■□□□□ 0.62
SUMO1-208ENST00000409627 TRPV1Q8NER1 839 aa18.9■□□□□ 0.62
SUMO1-208ENST00000409627 ZFP91Q96JP5 570 aaPredicted RBP18.9■□□□□ 0.62
SUMO1-208ENST00000409627 MBOAT7Q96N66 472 aa18.9■□□□□ 0.62
SUMO1-208ENST00000409627 MCOLN1Q9GZU1 580 aa18.9■□□□□ 0.62
SUMO1-208ENST00000409627 JADE2Q9NQC1 790 aa18.9■□□□□ 0.62
SUMO1-208ENST00000409627 RTEL1Q9NZ71 1219 aa18.9■□□□□ 0.62
SUMO1-208ENST00000409627 IGLV3-22A0A075B6J6 115 aa18.89■□□□□ 0.61
SUMO1-208ENST00000409627 MEIS1O00470 390 aa18.89■□□□□ 0.61
SUMO1-208ENST00000409627 MAFGO15525 162 aa18.89■□□□□ 0.61
SUMO1-208ENST00000409627 FIBPO43427 364 aa18.89■□□□□ 0.61
SUMO1-208ENST00000409627 BRD1O95696 1058 aa18.89■□□□□ 0.61
SUMO1-208ENST00000409627 F13A1P00488 732 aa18.89■□□□□ 0.61
SUMO1-208ENST00000409627 SETQ01105 290 aaPredicted RBP18.89■□□□□ 0.61
SUMO1-208ENST00000409627 RILPL1Q5EBL4 403 aa18.89■□□□□ 0.61
SUMO1-208ENST00000409627 KCNV1Q6PIU1 500 aa18.89■□□□□ 0.61
SUMO1-208ENST00000409627 SEPT14Q6ZU15 432 aa18.89■□□□□ 0.61
SUMO1-208ENST00000409627 SCFD2Q8WU76 684 aa18.89■□□□□ 0.61
SUMO1-208ENST00000409627 ARMC5Q96C12 935 aa18.89■□□□□ 0.61
SUMO1-208ENST00000409627 CDHR1Q96JP9 859 aa18.89■□□□□ 0.61
SUMO1-208ENST00000409627 CCNT1O60563 726 aaKnown RBP18.88■□□□□ 0.61
SUMO1-208ENST00000409627 TDP2O95551 362 aa18.88■□□□□ 0.61
SUMO1-208ENST00000409627 TGFB3P10600 412 aa18.88■□□□□ 0.61
SUMO1-208ENST00000409627 AKR1A1P14550 325 aa18.88■□□□□ 0.61
SUMO1-208ENST00000409627 ORC2Q13416 577 aaPredicted RBP18.88■□□□□ 0.61
SUMO1-208ENST00000409627 MTMR1Q13613 665 aa18.88■□□□□ 0.61
SUMO1-208ENST00000409627 CCDC144BQ3MJ40 725 aa18.88■□□□□ 0.61
SUMO1-208ENST00000409627 Q4G0T1 1027 aa18.88■□□□□ 0.61
SUMO1-208ENST00000409627 MYSM1Q5VVJ2 828 aa18.88■□□□□ 0.61
SUMO1-208ENST00000409627 IQSEC1Q6DN90 963 aa18.88■□□□□ 0.61
SUMO1-208ENST00000409627 PLA2G4DQ86XP0 818 aa18.88■□□□□ 0.61
SUMO1-208ENST00000409627 CYP2W1Q8TAV3 490 aa18.88■□□□□ 0.61
SUMO1-208ENST00000409627 LENG9Q96B70 501 aa18.88■□□□□ 0.61
SUMO1-208ENST00000409627 WDR11Q9BZH6 1224 aa18.88■□□□□ 0.61
SUMO1-208ENST00000409627 PDGFCQ9NRA1 345 aa18.88■□□□□ 0.61
SUMO1-208ENST00000409627 FAM184BQ9ULE4 1060 aa18.88■□□□□ 0.61
SUMO1-208ENST00000409627 CIZ1Q9ULV3 898 aaPredicted RBP18.88■□□□□ 0.61
SUMO1-208ENST00000409627 SPATA31C2B4DYI2 1134 aa18.87■□□□□ 0.61
SUMO1-208ENST00000409627 WNT7AO00755 349 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms