RNA–Protein interactions for RNA: ENST00000409460.5

VWA3B-201, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 4,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-201ENST00000409460 TRIM43Q96BQ3 446 aaPredicted RBP10.05□□□□□ -0.8
VWA3B-201ENST00000409460 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.05□□□□□ -0.8
VWA3B-201ENST00000409460 PHIPQ8WWQ0 1821 aa10.05□□□□□ -0.8
VWA3B-201ENST00000409460 EIF3JO75822 258 aaKnown RBP10.04□□□□□ -0.8
VWA3B-201ENST00000409460 ACRP10323 421 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 FAAP100Q0VG06 881 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 C9orf50Q5SZB4 431 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 EP400NLQ6ZTU2 488 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 SIAH1Q8IUQ4 282 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 TBX21Q9UL17 535 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 COG5Q9UP83 839 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 TLL1O43897 1013 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 STAM2O75886 525 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.04□□□□□ -0.8
VWA3B-201ENST00000409460 DDX60LQ5H9U9 1706 aaKnown RBP10.04□□□□□ -0.8
VWA3B-201ENST00000409460 ZNF76P36508 570 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 RPS6P62753 249 aaKnown RBP10.04□□□□□ -0.8
VWA3B-201ENST00000409460 BMS1Q14692 1282 aaKnown RBP10.04□□□□□ -0.8
VWA3B-201ENST00000409460 ATXN2LQ8WWM7 1075 aaKnown RBP10.04□□□□□ -0.8
VWA3B-201ENST00000409460 ALDH8A1Q9H2A2 487 aaPredicted RBP10.04□□□□□ -0.8
VWA3B-201ENST00000409460 NKX2-4Q9H2Z4 354 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 RIPK3Q9Y572 518 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 LPXNO60711 386 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 SNAP25P60880 206 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 CSPP1Q1MSJ5 1256 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 TMEM87AQ8NBN3 555 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 PI4K2BQ8TCG2 481 aa10.04□□□□□ -0.8
VWA3B-201ENST00000409460 LENG1Q96BZ8 264 aaPredicted RBP10.04□□□□□ -0.8
VWA3B-201ENST00000409460 SPDYE3A6NKU9 549 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 PSEN1P49768 467 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 CCDC173Q0VFZ6 552 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 PTGISQ16647 500 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 SH3RF1Q7Z6J0 888 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 SAMD11Q96NU1 681 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 SELPP16109 830 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 AZI2Q9H6S1 392 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 PDHBP11177 359 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 SMPD1P17405 629 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 PCDHA1Q9Y5I3 950 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 ZSWIM8A7E2V4 1837 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 SOWAHBA6NEL2 793 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 B4E1Z4 1266 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 TMEM240Q5SV17 173 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 XRRA1Q6P2D8 792 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 FAM126BQ8IXS8 530 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 C1QTNF1Q9BXJ1 281 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 PTPRFP10586 1907 aa10.03□□□□□ -0.8
VWA3B-201ENST00000409460 KLRF2D3W0D1 207 aa10.02□□□□□ -0.8
VWA3B-201ENST00000409460 PITPNM1O00562 1244 aa10.02□□□□□ -0.8
VWA3B-201ENST00000409460 EIF2AK2P19525 551 aaKnown RBP10.02□□□□□ -0.8
VWA3B-201ENST00000409460 FCHSD1Q86WN1 690 aa10.02□□□□□ -0.8
VWA3B-201ENST00000409460 PRDM12Q9H4Q4 367 aa10.02□□□□□ -0.8
VWA3B-201ENST00000409460 NASPP49321 788 aaPredicted RBP10.02□□□□□ -0.81
VWA3B-201ENST00000409460 SASS6Q6UVJ0 657 aa10.02□□□□□ -0.81
VWA3B-201ENST00000409460 SPATA33Q96N06 139 aa10.02□□□□□ -0.81
VWA3B-201ENST00000409460 UBA5Q9GZZ9 404 aa10.02□□□□□ -0.81
VWA3B-201ENST00000409460 RWDD3Q9Y3V2 267 aa10.02□□□□□ -0.81
VWA3B-201ENST00000409460 PCDHB15Q9Y5E8 787 aa10.02□□□□□ -0.81
VWA3B-201ENST00000409460 UTRNP46939 3433 aa10.02□□□□□ -0.81
VWA3B-201ENST00000409460 ABHD14A-ACY1A0A1B0GW23 586 aa10.02□□□□□ -0.81
VWA3B-201ENST00000409460 NBPF20Q3BBV1 942 aa10.02□□□□□ -0.81
VWA3B-201ENST00000409460 CPLX2Q6PUV4 134 aaKnown RBP10.02□□□□□ -0.81
VWA3B-201ENST00000409460 CCDC12Q8WUD4 166 aaPredicted RBP10.02□□□□□ -0.81
VWA3B-201ENST00000409460 FAM227BQ96M60 508 aa10.02□□□□□ -0.81
VWA3B-201ENST00000409460 ZKSCAN3Q9BRR0 538 aa10.02□□□□□ -0.81
VWA3B-201ENST00000409460 NOC4LQ9BVI4 516 aaKnown RBP10.02□□□□□ -0.81
VWA3B-201ENST00000409460 TGFB3P10600 412 aa10.02□□□□□ -0.81
VWA3B-201ENST00000409460 PSEN2P49810 448 aa10.02□□□□□ -0.81
VWA3B-201ENST00000409460 CNKSR3Q6P9H4 555 aa10.02□□□□□ -0.81
VWA3B-201ENST00000409460 C17orf102A2RUQ5 167 aa10.01□□□□□ -0.81
VWA3B-201ENST00000409460 NR3C2P08235 984 aa10.01□□□□□ -0.81
VWA3B-201ENST00000409460 MCTP2Q6DN12 878 aa10.01□□□□□ -0.81
VWA3B-201ENST00000409460 TTBK2Q6IQ55 1244 aa10.01□□□□□ -0.81
VWA3B-201ENST00000409460 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.01□□□□□ -0.81
VWA3B-201ENST00000409460 MUM1L1Q5H9M0 696 aa10.01□□□□□ -0.81
VWA3B-201ENST00000409460 TRPV6Q9H1D0 765 aa10.01□□□□□ -0.81
VWA3B-201ENST00000409460 ZNF236Q9UL36 1845 aa10.01□□□□□ -0.81
VWA3B-201ENST00000409460 SEC24BO95487 1268 aa10.01□□□□□ -0.81
VWA3B-201ENST00000409460 SRGAP2BP0DMP2 458 aa10.01□□□□□ -0.81
VWA3B-201ENST00000409460 FAM43BQ6ZT52 329 aaPredicted RBP10.01□□□□□ -0.81
VWA3B-201ENST00000409460 HCN4Q9Y3Q4 1203 aa10.01□□□□□ -0.81
VWA3B-201ENST00000409460 A0A0D9SFI3 127 aa10□□□□□ -0.81
VWA3B-201ENST00000409460 ZBTB5O15062 677 aa10□□□□□ -0.81
VWA3B-201ENST00000409460 GOLGA8HP0CJ92 632 aa10□□□□□ -0.81
VWA3B-201ENST00000409460 CDK7P50613 346 aa10□□□□□ -0.81
VWA3B-201ENST00000409460 PSMC6P62333 389 aa10□□□□□ -0.81
VWA3B-201ENST00000409460 CCDC85BQ15834 202 aaPredicted RBP10□□□□□ -0.81
VWA3B-201ENST00000409460 QRICH1Q2TAL8 776 aa10□□□□□ -0.81
VWA3B-201ENST00000409460 AFG1LQ8WV93 481 aa10□□□□□ -0.81
VWA3B-201ENST00000409460 LRFN2Q9ULH4 789 aa10□□□□□ -0.81
VWA3B-201ENST00000409460 DOCK3Q8IZD9 2030 aa10□□□□□ -0.81
VWA3B-201ENST00000409460 NFIBO00712 420 aa10□□□□□ -0.81
VWA3B-201ENST00000409460 PPFIA4O75335 1185 aa10□□□□□ -0.81
VWA3B-201ENST00000409460 PUS10Q3MIT2 529 aaKnown RBP10□□□□□ -0.81
VWA3B-201ENST00000409460 LRRC8DQ7L1W4 858 aa10□□□□□ -0.81
VWA3B-201ENST00000409460 SLC12A7Q9Y666 1083 aa10□□□□□ -0.81
VWA3B-201ENST00000409460 CCDC196A0A1B0GTZ2 297 aa10□□□□□ -0.81
VWA3B-201ENST00000409460 TNFRSF10AO00220 468 aa10□□□□□ -0.81
VWA3B-201ENST00000409460 CYP2C9P11712 490 aa10□□□□□ -0.81
VWA3B-201ENST00000409460 MFSD10Q14728 455 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms