RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 PDCD2LQ9BRP1 358 aa19.09■□□□□ 0.65
SSB-202ENST00000409333 TLR2O60603 784 aa19.08■□□□□ 0.64
SSB-202ENST00000409333 PGK2P07205 417 aa19.08■□□□□ 0.64
SSB-202ENST00000409333 CALCRLQ16602 461 aa19.08■□□□□ 0.64
SSB-202ENST00000409333 Q4G0T1 1027 aa19.08■□□□□ 0.64
SSB-202ENST00000409333 SPECC1Q5M775 1068 aa19.08■□□□□ 0.64
SSB-202ENST00000409333 PCNX4Q63HM2 1172 aa19.08■□□□□ 0.64
SSB-202ENST00000409333 ARL6IP4Q66PJ3 421 aaKnown RBP19.08■□□□□ 0.64
SSB-202ENST00000409333 SHC4Q6S5L8 630 aa19.08■□□□□ 0.64
SSB-202ENST00000409333 CCAR1Q8IX12 1150 aaKnown RBP19.08■□□□□ 0.64
SSB-202ENST00000409333 GJA10Q969M2 543 aa19.08■□□□□ 0.64
SSB-202ENST00000409333 UIMC1Q96RL1 719 aa19.08■□□□□ 0.64
SSB-202ENST00000409333 CSRNP2Q9H175 543 aa19.08■□□□□ 0.64
SSB-202ENST00000409333 GOLPH3LQ9H4A5 285 aa19.08■□□□□ 0.64
SSB-202ENST00000409333 ZFYVE28Q9HCC9 887 aa19.08■□□□□ 0.64
SSB-202ENST00000409333 WDR81Q562E7 1941 aa19.08■□□□□ 0.64
SSB-202ENST00000409333 A0A1W2PQ27 194 aa19.07■□□□□ 0.64
SSB-202ENST00000409333 A0A1W2PQ64 194 aa19.07■□□□□ 0.64
SSB-202ENST00000409333 A0A1W2PQD8 194 aa19.07■□□□□ 0.64
SSB-202ENST00000409333 FCER1AP12319 257 aa19.07■□□□□ 0.64
SSB-202ENST00000409333 MYCLP12524 364 aaPredicted RBP19.07■□□□□ 0.64
SSB-202ENST00000409333 LIG1P18858 919 aa19.07■□□□□ 0.64
SSB-202ENST00000409333 MRPS9P82933 396 aaKnown RBP19.07■□□□□ 0.64
SSB-202ENST00000409333 KCTD2Q14681 263 aa19.07■□□□□ 0.64
SSB-202ENST00000409333 C17orf99Q6UX52 265 aa19.07■□□□□ 0.64
SSB-202ENST00000409333 FAM133AQ8N9E0 248 aa19.07■□□□□ 0.64
SSB-202ENST00000409333 NSUN6Q8TEA1 469 aaKnown RBP19.07■□□□□ 0.64
SSB-202ENST00000409333 HAS1Q92839 578 aa19.07■□□□□ 0.64
SSB-202ENST00000409333 POTEB2H3BUK9 544 aa19.06■□□□□ 0.64
SSB-202ENST00000409333 MBD3O95983 291 aa19.06■□□□□ 0.64
SSB-202ENST00000409333 PRPHP41219 470 aa19.06■□□□□ 0.64
SSB-202ENST00000409333 KLHL40Q2TBA0 621 aa19.06■□□□□ 0.64
SSB-202ENST00000409333 CEP55Q53EZ4 464 aa19.06■□□□□ 0.64
SSB-202ENST00000409333 FSIP1Q8NA03 581 aa19.06■□□□□ 0.64
SSB-202ENST00000409333 MRPS27Q92552 414 aaKnown RBP19.06■□□□□ 0.64
SSB-202ENST00000409333 KCNMB3Q9NPA1 279 aa19.06■□□□□ 0.64
SSB-202ENST00000409333 DNAJC25-GNG10A0A024R161 153 aa19.06■□□□□ 0.64
SSB-202ENST00000409333 A0A1B0GVL5 298 aa19.06■□□□□ 0.64
SSB-202ENST00000409333 SOWAHBA6NEL2 793 aa19.06■□□□□ 0.64
SSB-202ENST00000409333 TXKP42681 527 aa19.06■□□□□ 0.64
SSB-202ENST00000409333 VEGFBP49765 207 aa19.06■□□□□ 0.64
SSB-202ENST00000409333 SKOR2Q2VWA4 1001 aaPredicted RBP19.06■□□□□ 0.64
SSB-202ENST00000409333 RESP18Q5W5W9 173 aa19.06■□□□□ 0.64
SSB-202ENST00000409333 DTHD1Q6ZMT9 781 aa19.06■□□□□ 0.64
SSB-202ENST00000409333 DNERQ8NFT8 737 aa19.06■□□□□ 0.64
SSB-202ENST00000409333 ETNPPLQ8TBG4 499 aa19.06■□□□□ 0.64
SSB-202ENST00000409333 CA12O43570 354 aa19.05■□□□□ 0.64
SSB-202ENST00000409333 ECM2O94769 699 aaPredicted RBP19.05■□□□□ 0.64
SSB-202ENST00000409333 NR3C2P08235 984 aa19.05■□□□□ 0.64
SSB-202ENST00000409333 CMA1P23946 247 aa19.05■□□□□ 0.64
SSB-202ENST00000409333 ALDH5A1P51649 535 aaPredicted RBP19.05■□□□□ 0.64
SSB-202ENST00000409333 GPR142Q7Z601 462 aa19.05■□□□□ 0.64
SSB-202ENST00000409333 ZNF579Q8NAF0 562 aaKnown RBP19.05■□□□□ 0.64
SSB-202ENST00000409333 FGD4Q96M96 766 aa19.05■□□□□ 0.64
SSB-202ENST00000409333 MXRA8Q9BRK3 442 aa19.05■□□□□ 0.64
SSB-202ENST00000409333 MSH4O15457 936 aa19.04■□□□□ 0.64
SSB-202ENST00000409333 ITGB5P18084 799 aa19.04■□□□□ 0.64
SSB-202ENST00000409333 CCND2P30279 289 aa19.04■□□□□ 0.64
SSB-202ENST00000409333 USP49Q70CQ1 688 aa19.04■□□□□ 0.64
SSB-202ENST00000409333 PLA2G4DQ86XP0 818 aa19.04■□□□□ 0.64
SSB-202ENST00000409333 UBIAD1Q9Y5Z9 338 aa19.04■□□□□ 0.64
SSB-202ENST00000409333 MEIS1O00470 390 aa19.04■□□□□ 0.64
SSB-202ENST00000409333 ALDH1A1P00352 501 aa19.04■□□□□ 0.64
SSB-202ENST00000409333 PFKFB1P16118 471 aa19.04■□□□□ 0.64
SSB-202ENST00000409333 ADORA2AP29274 412 aa19.04■□□□□ 0.64
SSB-202ENST00000409333 MAPK4P31152 587 aa19.04■□□□□ 0.64
SSB-202ENST00000409333 TECP42680 631 aa19.04■□□□□ 0.64
SSB-202ENST00000409333 NDUFA8P51970 172 aa19.04■□□□□ 0.64
SSB-202ENST00000409333 VSIG10LQ86VR7 867 aa19.04■□□□□ 0.64
SSB-202ENST00000409333 WDR11Q9BZH6 1224 aa19.04■□□□□ 0.64
SSB-202ENST00000409333 IVNS1ABPQ9Y6Y0 642 aa19.04■□□□□ 0.64
SSB-202ENST00000409333 MARCH6O60337 910 aa19.03■□□□□ 0.64
SSB-202ENST00000409333 NR1I2O75469 434 aa19.03■□□□□ 0.64
SSB-202ENST00000409333 ARP10275 920 aa19.03■□□□□ 0.64
SSB-202ENST00000409333 LONP1P36776 959 aaKnown RBP19.03■□□□□ 0.64
SSB-202ENST00000409333 SETQ01105 290 aaPredicted RBP19.03■□□□□ 0.64
SSB-202ENST00000409333 REM2Q8IYK8 340 aaPredicted RBP19.03■□□□□ 0.64
SSB-202ENST00000409333 SYMPKQ92797 1274 aaKnown RBP19.03■□□□□ 0.64
SSB-202ENST00000409333 EPSTI1Q96J88 318 aa19.03■□□□□ 0.64
SSB-202ENST00000409333 TTC12Q9H892 705 aaPredicted RBP19.03■□□□□ 0.64
SSB-202ENST00000409333 ADD3Q9UEY8 706 aaKnown RBP19.03■□□□□ 0.64
SSB-202ENST00000409333 PP2D1A8MPX8 630 aa19.02■□□□□ 0.64
SSB-202ENST00000409333 TBX3O15119 743 aa19.02■□□□□ 0.64
SSB-202ENST00000409333 CDC25AP30304 524 aa19.02■□□□□ 0.64
SSB-202ENST00000409333 FXR2P51116 673 aaKnown RBP eCLIP19.02■□□□□ 0.646e-8■■■■□ 20
SSB-202ENST00000409333 SNW1Q13573 536 aaKnown RBP19.02■□□□□ 0.64
SSB-202ENST00000409333 CAVIN1Q6NZI2 390 aaKnown RBP19.02■□□□□ 0.64
SSB-202ENST00000409333 CCDC73Q6ZRK6 1079 aa19.02■□□□□ 0.64
SSB-202ENST00000409333 PLEKHH3Q7Z736 793 aa19.02■□□□□ 0.64
SSB-202ENST00000409333 ABRAQ8N0Z2 381 aa19.02■□□□□ 0.64
SSB-202ENST00000409333 ENGASEQ8NFI3 743 aa19.02■□□□□ 0.64
SSB-202ENST00000409333 IWS1Q96ST2 819 aa19.02■□□□□ 0.64
SSB-202ENST00000409333 HPSEQ9Y251 543 aa19.02■□□□□ 0.64
SSB-202ENST00000409333 FAM237AA0A1B0GTK4 181 aa19.01■□□□□ 0.63
SSB-202ENST00000409333 POTEMA6NI47 508 aa19.01■□□□□ 0.63
SSB-202ENST00000409333 STRNO43815 780 aa19.01■□□□□ 0.63
SSB-202ENST00000409333 COBLO75128 1261 aa19.01■□□□□ 0.63
SSB-202ENST00000409333 FAM160A1Q05DH4 1040 aa19.01■□□□□ 0.63
SSB-202ENST00000409333 GRB14Q14449 540 aa19.01■□□□□ 0.63
SSB-202ENST00000409333 XRRA1Q6P2D8 792 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms