RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 BTG4Q9NY30 223 aa9.04□□□□□ -0.96
PTPN12-202ENST00000407343 GPR160Q9UJ42 338 aa9.04□□□□□ -0.96
PTPN12-202ENST00000407343 PNLIPP16233 465 aa9.03□□□□□ -0.96
PTPN12-202ENST00000407343 ATG4DQ86TL0 474 aaPredicted RBP9.03□□□□□ -0.96
PTPN12-202ENST00000407343 Q8N3U1 123 aa9.03□□□□□ -0.96
PTPN12-202ENST00000407343 ALG1Q9BT22 464 aa9.03□□□□□ -0.96
PTPN12-202ENST00000407343 JAM3Q9BX67 310 aa9.03□□□□□ -0.96
PTPN12-202ENST00000407343 FAM126AQ9BYI3 521 aaPredicted RBP9.03□□□□□ -0.96
PTPN12-202ENST00000407343 CBLCQ9ULV8 474 aa9.03□□□□□ -0.96
PTPN12-202ENST00000407343 YBX2Q9Y2T7 364 aaKnown RBP9.03□□□□□ -0.96
PTPN12-202ENST00000407343 OPA1O60313 960 aa9.02□□□□□ -0.97
PTPN12-202ENST00000407343 DNAJC6O75061 913 aa9.02□□□□□ -0.97
PTPN12-202ENST00000407343 PAPLNO95428 1278 aa9.02□□□□□ -0.97
PTPN12-202ENST00000407343 RAC2P15153 192 aa9.02□□□□□ -0.97
PTPN12-202ENST00000407343 CYP4F8P98187 520 aa9.02□□□□□ -0.97
PTPN12-202ENST00000407343 PCBP1Q15365 356 aaKnown RBP eCLIP9.02□□□□□ -0.97
PTPN12-202ENST00000407343 ABHD4Q8TB40 342 aa9.02□□□□□ -0.97
PTPN12-202ENST00000407343 ORAI3Q9BRQ5 295 aa9.02□□□□□ -0.97
PTPN12-202ENST00000407343 CELF4Q9BZC1 486 aaKnown RBP9.02□□□□□ -0.97
PTPN12-202ENST00000407343 SPC25Q9HBM1 224 aa9.02□□□□□ -0.97
PTPN12-202ENST00000407343 COQ6Q9Y2Z9 468 aa9.02□□□□□ -0.97
PTPN12-202ENST00000407343 TCRBV5S4A2TA0A5A2 114 aa9.01□□□□□ -0.97
PTPN12-202ENST00000407343 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.01□□□□□ -0.97
PTPN12-202ENST00000407343 FAM47E-STBD1D6RA91 191 aa9.01□□□□□ -0.97
PTPN12-202ENST00000407343 GLRX3O76003 335 aaKnown RBP9.01□□□□□ -0.97
PTPN12-202ENST00000407343 JMJD7P0C870 316 aa9.01□□□□□ -0.97
PTPN12-202ENST00000407343 SRGAP2CP0DJJ0 459 aa9.01□□□□□ -0.97
PTPN12-202ENST00000407343 PYGMP11217 842 aa9.01□□□□□ -0.97
PTPN12-202ENST00000407343 ITGB5P18084 799 aa9.01□□□□□ -0.97
PTPN12-202ENST00000407343 AFMP43652 599 aa9.01□□□□□ -0.97
PTPN12-202ENST00000407343 MECP2P51608 486 aaKnown RBP9.01□□□□□ -0.97
PTPN12-202ENST00000407343 ERVFRD-1P60508 538 aa9.01□□□□□ -0.97
PTPN12-202ENST00000407343 SEPT7Q16181 437 aaKnown RBP9.01□□□□□ -0.97
PTPN12-202ENST00000407343 RNF187Q5TA31 235 aaPredicted RBP9.01□□□□□ -0.97
PTPN12-202ENST00000407343 CNNM4Q6P4Q7 775 aa9.01□□□□□ -0.97
PTPN12-202ENST00000407343 OVCH1Q7RTY7 1134 aa9.01□□□□□ -0.97
PTPN12-202ENST00000407343 SIRT2Q8IXJ6 389 aa9.01□□□□□ -0.97
PTPN12-202ENST00000407343 TRMT2BQ96GJ1 504 aaKnown RBP9.01□□□□□ -0.97
PTPN12-202ENST00000407343 KIRREL1Q96J84 757 aa9.01□□□□□ -0.97
PTPN12-202ENST00000407343 CHAMP1Q96JM3 812 aa9.01□□□□□ -0.97
PTPN12-202ENST00000407343 TMX1Q9H3N1 280 aa9.01□□□□□ -0.97
PTPN12-202ENST00000407343 MAPRE3Q9UPY8 281 aa9.01□□□□□ -0.97
PTPN12-202ENST00000407343 SRGAP3O43295 1099 aa9□□□□□ -0.97
PTPN12-202ENST00000407343 NTRK1P04629 796 aa9□□□□□ -0.97
PTPN12-202ENST00000407343 DBHP09172 617 aa9□□□□□ -0.97
PTPN12-202ENST00000407343 TAF7LQ5H9L4 462 aa9□□□□□ -0.97
PTPN12-202ENST00000407343 MROH9Q5TGP6 573 aa9□□□□□ -0.97
PTPN12-202ENST00000407343 CDCA2Q69YH5 1023 aaPredicted RBP9□□□□□ -0.97
PTPN12-202ENST00000407343 WWC2Q6AWC2 1192 aa9□□□□□ -0.97
PTPN12-202ENST00000407343 PKN3Q6P5Z2 889 aa9□□□□□ -0.97
PTPN12-202ENST00000407343 C16orf59Q7L2K0 433 aa9□□□□□ -0.97
PTPN12-202ENST00000407343 ZC3H7AQ8IWR0 971 aaKnown RBP9□□□□□ -0.97
PTPN12-202ENST00000407343 IGSF22Q8N9C0 903 aa9□□□□□ -0.97
PTPN12-202ENST00000407343 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9□□□□□ -0.97
PTPN12-202ENST00000407343 CCDC66A2RUB6 948 aa8.99□□□□□ -0.97
PTPN12-202ENST00000407343 TRAF5O00463 557 aa8.99□□□□□ -0.97
PTPN12-202ENST00000407343 AMY2AP04746 511 aa8.99□□□□□ -0.97
PTPN12-202ENST00000407343 AMY2BP19961 511 aa8.99□□□□□ -0.97
PTPN12-202ENST00000407343 AMPD3Q01432 767 aa8.99□□□□□ -0.97
PTPN12-202ENST00000407343 OTOP3Q7RTS5 596 aa8.99□□□□□ -0.97
PTPN12-202ENST00000407343 SH3RF2Q8TEC5 729 aa8.99□□□□□ -0.97
PTPN12-202ENST00000407343 FBXW5Q969U6 566 aa8.99□□□□□ -0.97
PTPN12-202ENST00000407343 KCNJ15Q99712 375 aa8.99□□□□□ -0.97
PTPN12-202ENST00000407343 EPB41L1Q9H4G0 881 aa8.99□□□□□ -0.97
PTPN12-202ENST00000407343 SAMD15Q9P1V8 674 aa8.99□□□□□ -0.97
PTPN12-202ENST00000407343 B4E1Z4 1266 aa8.98□□□□□ -0.97
PTPN12-202ENST00000407343 ZNF561-AS1K7EIQ3 104 aa8.98□□□□□ -0.97
PTPN12-202ENST00000407343 CBX4O00257 560 aa8.98□□□□□ -0.97
PTPN12-202ENST00000407343 NKRFO15226 690 aaKnown RBP eCLIP8.98□□□□□ -0.97
PTPN12-202ENST00000407343 YBX3P16989 372 aaKnown RBP eCLIP8.98□□□□□ -0.972e-6■■■□□ 16.6
PTPN12-202ENST00000407343 SDHBP21912 280 aa8.98□□□□□ -0.97
PTPN12-202ENST00000407343 LACTBP83111 547 aaPredicted RBP8.98□□□□□ -0.97
PTPN12-202ENST00000407343 TMEM177Q53S58 311 aa8.98□□□□□ -0.97
PTPN12-202ENST00000407343 EMC4Q5J8M3 183 aa8.98□□□□□ -0.97
PTPN12-202ENST00000407343 PIK3R6Q5UE93 754 aa8.98□□□□□ -0.97
PTPN12-202ENST00000407343 PPM1KQ8N3J5 372 aa8.98□□□□□ -0.97
PTPN12-202ENST00000407343 NETO2Q8NC67 525 aa8.98□□□□□ -0.97
PTPN12-202ENST00000407343 INTS4Q96HW7 963 aaKnown RBP8.98□□□□□ -0.97
PTPN12-202ENST00000407343 CAAP1Q9H8G2 361 aa8.98□□□□□ -0.97
PTPN12-202ENST00000407343 SMURF1Q9HCE7 757 aa8.98□□□□□ -0.97
PTPN12-202ENST00000407343 A0A1W2PQ27 194 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 A0A1W2PQ64 194 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 A0A1W2PQC6 194 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 A0A1W2PQD8 194 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 KPNA6O60684 536 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 NPTXRO95502 500 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 SLC6A11P48066 632 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 RBM10P98175 930 aaKnown RBP8.97□□□□□ -0.97
PTPN12-202ENST00000407343 PTPROQ16827 1216 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 BICRALQ6AI39 1079 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 FSTL4Q6MZW2 842 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 ANKLE2Q86XL3 938 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 AFAP1L2Q8N4X5 818 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 UBR7Q8N806 425 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 PIP4K2CQ8TBX8 421 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 RXFP1Q9HBX9 757 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 SIT1Q9Y3P8 196 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 CARMIL2Q6F5E8 1435 aa8.97□□□□□ -0.97
PTPN12-202ENST00000407343 M0R2C6 588 aa8.96□□□□□ -0.98
PTPN12-202ENST00000407343 SGSM2O43147 1006 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms