RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 ZKSCAN4Q969J2 545 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-205ENST00000404914 M0R2N6 131 aa17.18■□□□□ 0.34
ATG4B-205ENST00000404914 CALM1P0DP23 149 aa17.18■□□□□ 0.34
ATG4B-205ENST00000404914 CALM2P0DP24 149 aa17.18■□□□□ 0.34
ATG4B-205ENST00000404914 CALM3P0DP25 149 aa17.18■□□□□ 0.34
ATG4B-205ENST00000404914 HPDP32754 393 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-205ENST00000404914 NOC3LQ8WTT2 800 aaKnown RBP17.18■□□□□ 0.34
ATG4B-205ENST00000404914 KRT12Q99456 494 aa17.18■□□□□ 0.34
ATG4B-205ENST00000404914 PCDHA6Q9UN73 950 aa17.18■□□□□ 0.34
ATG4B-205ENST00000404914 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.18■□□□□ 0.34
ATG4B-205ENST00000404914 PCDHA8Q9Y5H6 950 aa17.18■□□□□ 0.34
ATG4B-205ENST00000404914 CYP19A1P11511 503 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-205ENST00000404914 PAFAH1B1P43034 410 aa17.18■□□□□ 0.34
ATG4B-205ENST00000404914 ASTE1Q2TB18 679 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-205ENST00000404914 GLIS3Q8NEA6 775 aa17.18■□□□□ 0.34
ATG4B-205ENST00000404914 ALS2CR12Q96Q35 445 aa17.18■□□□□ 0.34
ATG4B-205ENST00000404914 NDST4Q9H3R1 872 aa17.18■□□□□ 0.34
ATG4B-205ENST00000404914 PCDHA4Q9UN74 947 aa17.18■□□□□ 0.34
ATG4B-205ENST00000404914 FGRP09769 529 aa17.17■□□□□ 0.34
ATG4B-205ENST00000404914 PSEN1P49768 467 aa17.17■□□□□ 0.34
ATG4B-205ENST00000404914 CHRNDQ07001 517 aa17.17■□□□□ 0.34
ATG4B-205ENST00000404914 ACTN3Q08043 901 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-205ENST00000404914 SF3B2Q13435 895 aaKnown RBP17.17■□□□□ 0.34
ATG4B-205ENST00000404914 CCSER1Q9C0I3 900 aa17.17■□□□□ 0.34
ATG4B-205ENST00000404914 MDH1P40925 334 aaKnown RBP17.17■□□□□ 0.34
ATG4B-205ENST00000404914 ITGB3BPQ13352 177 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-205ENST00000404914 VWA3BQ502W6 1294 aa17.17■□□□□ 0.34
ATG4B-205ENST00000404914 HGSNATQ68CP4 663 aa17.17■□□□□ 0.34
ATG4B-205ENST00000404914 CCDC13Q8IYE1 715 aa17.17■□□□□ 0.34
ATG4B-205ENST00000404914 RUBCNQ92622 972 aa17.17■□□□□ 0.34
ATG4B-205ENST00000404914 CPVLQ9H3G5 476 aa17.17■□□□□ 0.34
ATG4B-205ENST00000404914 PPANQ9NQ55 473 aaKnown RBP17.17■□□□□ 0.34
ATG4B-205ENST00000404914 ATXN2Q99700 1313 aaKnown RBP17.16■□□□□ 0.34
ATG4B-205ENST00000404914 CABP7Q86V35 215 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 DZIP3Q86Y13 1208 aaKnown RBP17.16■□□□□ 0.34
ATG4B-205ENST00000404914 IFT20Q8IY31 132 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 ATP6V1G3Q96LB4 118 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 NLRC4Q9NPP4 1024 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 A0A1B0GUL6 1792 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 CCDC194A0A1B0GVG4 234 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 E7EVH7 732 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 PJA2O43164 708 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 PALMO75781 387 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 QPCTQ16769 361 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 PTPROQ16827 1216 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 EP400NLQ6ZTU2 488 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 KRT27Q7Z3Y8 459 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 ZNF34Q8IZ26 560 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 CENPHQ9H3R5 247 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 LRRC4CQ9HCJ2 640 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 PLAAQ9Y263 795 aa17.16■□□□□ 0.34
ATG4B-205ENST00000404914 TLR2O60603 784 aa17.15■□□□□ 0.34
ATG4B-205ENST00000404914 ATP6V1AP38606 617 aa17.15■□□□□ 0.34
ATG4B-205ENST00000404914 CEP85LQ5SZL2 805 aa17.15■□□□□ 0.34
ATG4B-205ENST00000404914 VCPKMTQ9H867 229 aa17.15■□□□□ 0.34
ATG4B-205ENST00000404914 TAF1P21675 1872 aa17.15■□□□□ 0.34
ATG4B-205ENST00000404914 BICDL2A1A5D9 508 aa17.15■□□□□ 0.34
ATG4B-205ENST00000404914 RAD51CO43502 376 aa17.15■□□□□ 0.34
ATG4B-205ENST00000404914 USP8P40818 1118 aa17.15■□□□□ 0.34
ATG4B-205ENST00000404914 CHADLQ6NUI6 762 aa17.15■□□□□ 0.34
ATG4B-205ENST00000404914 DNAAF5Q86Y56 855 aa17.15■□□□□ 0.34
ATG4B-205ENST00000404914 TEX2Q8IWB9 1127 aa17.15■□□□□ 0.34
ATG4B-205ENST00000404914 PACSIN1Q9BY11 444 aa17.15■□□□□ 0.34
ATG4B-205ENST00000404914 GOLPH3Q9H4A6 298 aa17.15■□□□□ 0.34
ATG4B-205ENST00000404914 TULP1O00294 542 aaPredicted RBP17.14■□□□□ 0.34
ATG4B-205ENST00000404914 CYTH3O43739 400 aa17.14■□□□□ 0.34
ATG4B-205ENST00000404914 CHRM1P11229 460 aaPredicted RBP17.14■□□□□ 0.34
ATG4B-205ENST00000404914 CFAP221Q4G0U5 840 aa17.14■□□□□ 0.34
ATG4B-205ENST00000404914 C6orf89Q6UWU4 347 aa17.14■□□□□ 0.34
ATG4B-205ENST00000404914 MAATS1Q7Z4T9 603 aa17.14■□□□□ 0.34
ATG4B-205ENST00000404914 DDX42Q86XP3 938 aaKnown RBP eCLIP17.14■□□□□ 0.34
ATG4B-205ENST00000404914 KLHL7Q8IXQ5 586 aa17.14■□□□□ 0.34
ATG4B-205ENST00000404914 PAGR1Q9BTK6 254 aa17.14■□□□□ 0.34
ATG4B-205ENST00000404914 MMTAG2Q9BU76 263 aaKnown RBP17.14■□□□□ 0.34
ATG4B-205ENST00000404914 BRIP1Q9BX63 1249 aa17.14■□□□□ 0.34
ATG4B-205ENST00000404914 KANSL2Q9H9L4 492 aa17.14■□□□□ 0.34
ATG4B-205ENST00000404914 RASSF9O75901 435 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 KLRC1P26715 233 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 TMOD1P28289 359 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 DDR1Q08345 913 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 KCNMA1Q12791 1236 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 PAK2Q13177 524 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 TDRD12Q587J7 1177 aaKnown RBP17.14■□□□□ 0.33
ATG4B-205ENST00000404914 FAM114A1Q8IWE2 563 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 NOX5Q96PH1 765 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 SLC40A1Q9NP59 571 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 KLC4Q9NSK0 619 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 BTAF1O14981 1849 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 PDHBP11177 359 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 LRRC41Q15345 812 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 CCDC40Q4G0X9 1142 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 CENPPQ6IPU0 288 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 PDXDC1Q6P996 788 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 FAM228AQ86W67 206 aa17.14■□□□□ 0.33
ATG4B-205ENST00000404914 DNM1LO00429 736 aa17.13■□□□□ 0.33
ATG4B-205ENST00000404914 SSBP05455 408 aaKnown RBP eCLIP17.13■□□□□ 0.33
ATG4B-205ENST00000404914 CALML3P27482 149 aa17.13■□□□□ 0.33
ATG4B-205ENST00000404914 ECHS1P30084 290 aa17.13■□□□□ 0.33
ATG4B-205ENST00000404914 KCNQ4P56696 695 aa17.13■□□□□ 0.33
ATG4B-205ENST00000404914 EHHADHQ08426 723 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms