RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 LETM2Q2VYF4 491 aa37.9■■■■□ 3.66
CSNK1E-204ENST00000403904 FAM173BQ6P4H8 233 aa37.9■■■■□ 3.66
CSNK1E-204ENST00000403904 TRIB2Q92519 343 aa37.9■■■■□ 3.66
CSNK1E-204ENST00000403904 RTEL1Q9NZ71 1219 aa37.9■■■■□ 3.66
CSNK1E-204ENST00000403904 CIZ1Q9ULV3 898 aaPredicted RBP37.9■■■■□ 3.66
CSNK1E-204ENST00000403904 EEPD1Q7L9B9 569 aa37.89■■■■□ 3.66
CSNK1E-204ENST00000403904 MSL3Q8N5Y2 521 aaKnown RBP37.89■■■■□ 3.66
CSNK1E-204ENST00000403904 SYNGAP1Q96PV0 1343 aa37.89■■■■□ 3.66
CSNK1E-204ENST00000403904 WNT7AO00755 349 aa37.89■■■■□ 3.66
CSNK1E-204ENST00000403904 ADCY3O60266 1144 aa37.89■■■■□ 3.66
CSNK1E-204ENST00000403904 ELNP15502 786 aa37.89■■■■□ 3.66
CSNK1E-204ENST00000403904 CYP2C19P33261 490 aa37.89■■■■□ 3.66
CSNK1E-204ENST00000403904 XRRA1Q6P2D8 792 aa37.89■■■■□ 3.66
CSNK1E-204ENST00000403904 CDKN2AIPQ9NXV6 580 aaPredicted RBP37.89■■■■□ 3.66
CSNK1E-204ENST00000403904 PTCH2Q9Y6C5 1203 aa37.89■■■■□ 3.66
CSNK1E-204ENST00000403904 SNAI1O95863 264 aaPredicted RBP37.88■■■■□ 3.65
CSNK1E-204ENST00000403904 IGHA2P01877 340 aa37.88■■■■□ 3.65
CSNK1E-204ENST00000403904 ZNF76P36508 570 aa37.88■■■■□ 3.65
CSNK1E-204ENST00000403904 TOB1P50616 345 aaPredicted RBP37.88■■■■□ 3.65
CSNK1E-204ENST00000403904 MYSM1Q5VVJ2 828 aa37.88■■■■□ 3.65
CSNK1E-204ENST00000403904 NOL7Q9UMY1 257 aaKnown RBP37.88■■■■□ 3.65
CSNK1E-204ENST00000403904 EIF3JO75822 258 aaKnown RBP37.87■■■■□ 3.65
CSNK1E-204ENST00000403904 CYP2W1Q8TAV3 490 aa37.87■■■■□ 3.65
CSNK1E-204ENST00000403904 PTPN22Q9Y2R2 807 aa37.87■■■■□ 3.65
CSNK1E-204ENST00000403904 NBR1Q14596 966 aa37.86■■■■□ 3.65
CSNK1E-204ENST00000403904 FOXD4L6Q3SYB3 417 aaPredicted RBP37.86■■■■□ 3.65
CSNK1E-204ENST00000403904 FOXD4L3Q6VB84 417 aaPredicted RBP37.86■■■■□ 3.65
CSNK1E-204ENST00000403904 CHMP5Q9NZZ3 219 aa37.86■■■■□ 3.65
CSNK1E-204ENST00000403904 FAM86B1E9PN63 330 aa37.85■■■■□ 3.65
CSNK1E-204ENST00000403904 CCNT1O60563 726 aaKnown RBP37.85■■■■□ 3.65
CSNK1E-204ENST00000403904 TDP2O95551 362 aa37.85■■■■□ 3.65
CSNK1E-204ENST00000403904 FAM86B2P0C5J1 330 aa37.85■■■■□ 3.65
CSNK1E-204ENST00000403904 CTU1Q7Z7A3 348 aaKnown RBP37.85■■■■□ 3.65
CSNK1E-204ENST00000403904 FBXO16Q8IX29 292 aaPredicted RBP37.85■■■■□ 3.65
CSNK1E-204ENST00000403904 TRMT44Q8IYL2 757 aaKnown RBP37.85■■■■□ 3.65
CSNK1E-204ENST00000403904 ITGB5P18084 799 aa37.85■■■■□ 3.65
CSNK1E-204ENST00000403904 CIITAP33076 1130 aa37.85■■■■□ 3.65
CSNK1E-204ENST00000403904 TRAPPC10P48553 1259 aa37.85■■■■□ 3.65
CSNK1E-204ENST00000403904 CEP55Q53EZ4 464 aa37.85■■■■□ 3.65
CSNK1E-204ENST00000403904 RILPL1Q5EBL4 403 aa37.85■■■■□ 3.65
CSNK1E-204ENST00000403904 PXYLP1Q8TE99 480 aa37.85■■■■□ 3.65
CSNK1E-204ENST00000403904 KIAA1217Q5T5P2 1943 aa37.84■■■■□ 3.65
CSNK1E-204ENST00000403904 MYH15Q9Y2K3 1946 aa37.84■■■■□ 3.65
CSNK1E-204ENST00000403904 RGS20O76081 388 aa37.84■■■■□ 3.65
CSNK1E-204ENST00000403904 MXRA8Q9BRK3 442 aa37.84■■■■□ 3.65
CSNK1E-204ENST00000403904 UBIAD1Q9Y5Z9 338 aa37.84■■■■□ 3.65
CSNK1E-204ENST00000403904 STAM2O75886 525 aa37.83■■■■□ 3.65
CSNK1E-204ENST00000403904 TTC38Q5R3I4 469 aa37.83■■■■□ 3.65
CSNK1E-204ENST00000403904 PRAMEF19Q5SWL8 479 aa37.83■■■■□ 3.65
CSNK1E-204ENST00000403904 MFSD14CQ5VZR4 134 aa37.83■■■■□ 3.65
CSNK1E-204ENST00000403904 TRIM32Q13049 653 aa37.82■■■■□ 3.65
CSNK1E-204ENST00000403904 SEPT14Q6ZU15 432 aa37.82■■■■□ 3.65
CSNK1E-204ENST00000403904 INPP4AQ96PE3 977 aaPredicted RBP37.82■■■■□ 3.65
CSNK1E-204ENST00000403904 WDR11Q9BZH6 1224 aa37.82■■■■□ 3.65
CSNK1E-204ENST00000403904 KATNBL1Q9H079 304 aa37.82■■■■□ 3.65
CSNK1E-204ENST00000403904 ABHD16BQ9H3Z7 469 aa37.82■■■■□ 3.65
CSNK1E-204ENST00000403904 CNPY2Q9Y2B0 182 aa37.82■■■■□ 3.65
CSNK1E-204ENST00000403904 PCDHB6Q9Y5E3 794 aa37.82■■■■□ 3.65
CSNK1E-204ENST00000403904 CYP3A7-CYP3A51PA0A087WV96 503 aa37.81■■■■□ 3.64
CSNK1E-204ENST00000403904 CYP3A7P24462 503 aa37.81■■■■□ 3.64
CSNK1E-204ENST00000403904 ZNF174Q15697 407 aa37.81■■■■□ 3.64
CSNK1E-204ENST00000403904 PRR16Q569H4 304 aa37.81■■■■□ 3.64
CSNK1E-204ENST00000403904 PPP4R3AQ6IN85 833 aa37.81■■■■□ 3.64
CSNK1E-204ENST00000403904 MOXD1Q6UVY6 613 aa37.81■■■■□ 3.64
CSNK1E-204ENST00000403904 IGLV3-22A0A075B6J6 115 aa37.8■■■■□ 3.64
CSNK1E-204ENST00000403904 MEIS1O00470 390 aa37.8■■■■□ 3.64
CSNK1E-204ENST00000403904 ACVR2BQ13705 512 aa37.8■■■■□ 3.64
CSNK1E-204ENST00000403904 SLAIN1Q8ND83 568 aa37.8■■■■□ 3.64
CSNK1E-204ENST00000403904 VTA1Q9NP79 307 aa37.8■■■■□ 3.64
CSNK1E-204ENST00000403904 JADE2Q9NQC1 790 aa37.8■■■■□ 3.64
CSNK1E-204ENST00000403904 DDX25Q9UHL0 483 aaKnown RBP37.8■■■■□ 3.64
CSNK1E-204ENST00000403904 HMGCRP04035 888 aa37.8■■■■□ 3.64
CSNK1E-204ENST00000403904 GRK4P32298 578 aa37.8■■■■□ 3.64
CSNK1E-204ENST00000403904 MCM7P33993 719 aa37.8■■■■□ 3.64
CSNK1E-204ENST00000403904 NAP1L4Q99733 375 aaKnown RBP37.8■■■■□ 3.64
CSNK1E-204ENST00000403904 PDGFCQ9NRA1 345 aa37.8■■■■□ 3.64
CSNK1E-204ENST00000403904 ZHX1Q9UKY1 873 aaPredicted RBP37.8■■■■□ 3.64
CSNK1E-204ENST00000403904 SLC37A4O43826 429 aa37.79■■■■□ 3.64
CSNK1E-204ENST00000403904 GCFC2P16383 781 aaKnown RBP37.79■■■■□ 3.64
CSNK1E-204ENST00000403904 GNPTABQ3T906 1256 aa37.79■■■■□ 3.64
CSNK1E-204ENST00000403904 PLA2G4DQ86XP0 818 aa37.79■■■■□ 3.64
CSNK1E-204ENST00000403904 LENG9Q96B70 501 aa37.79■■■■□ 3.64
CSNK1E-204ENST00000403904 MBOAT7Q96N66 472 aa37.79■■■■□ 3.64
CSNK1E-204ENST00000403904 PRDM10Q9NQV6 1147 aa37.79■■■■□ 3.64
CSNK1E-204ENST00000403904 MTMR1Q13613 665 aa37.78■■■■□ 3.64
CSNK1E-204ENST00000403904 TAPT1Q6NXT6 567 aa37.78■■■■□ 3.64
CSNK1E-204ENST00000403904 NLRX1Q86UT6 975 aa37.78■■■■□ 3.64
CSNK1E-204ENST00000403904 ARP10275 920 aa37.77■■■■□ 3.64
CSNK1E-204ENST00000403904 CACNB2Q08289 660 aaPredicted RBP37.77■■■■□ 3.64
CSNK1E-204ENST00000403904 Q4G0T1 1027 aa37.77■■■■□ 3.64
CSNK1E-204ENST00000403904 UIMC1Q96RL1 719 aa37.77■■■■□ 3.64
CSNK1E-204ENST00000403904 FTOQ9C0B1 505 aaKnown RBP eCLIP37.77■■■■□ 3.644e-9■■□□□ 11.5
CSNK1E-204ENST00000403904 NIPA1Q7RTP0 329 aa37.76■■■■□ 3.64
CSNK1E-204ENST00000403904 GPRASP2Q96D09 838 aa37.76■■■■□ 3.64
CSNK1E-204ENST00000403904 KCNH7Q9NS40 1196 aa37.76■■■■□ 3.64
CSNK1E-204ENST00000403904 ZNF865P0CJ78 1059 aaPredicted RBP37.76■■■■□ 3.63
CSNK1E-204ENST00000403904 SEMA3FQ13275 785 aa37.76■■■■□ 3.63
CSNK1E-204ENST00000403904 POTEDQ86YR6 584 aa37.76■■■■□ 3.63
CSNK1E-204ENST00000403904 SH3TC2Q8TF17 1288 aa37.76■■■■□ 3.63
CSNK1E-204ENST00000403904 CHAMP1Q96JM3 812 aa37.76■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms