RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 ARVCFO00192 962 aa20.63■□□□□ 0.89
THUMPD2-202ENST00000403537 CTAGE5O15320 804 aa20.63■□□□□ 0.89
THUMPD2-202ENST00000403537 ST3GAL1Q11201 340 aa20.63■□□□□ 0.89
THUMPD2-202ENST00000403537 SCRN1Q12765 414 aa20.63■□□□□ 0.89
THUMPD2-202ENST00000403537 TTLL4Q14679 1199 aa20.63■□□□□ 0.89
THUMPD2-202ENST00000403537 NECAB1Q8N987 351 aa20.63■□□□□ 0.89
THUMPD2-202ENST00000403537 ZNF274Q96GC6 653 aaPredicted RBP20.63■□□□□ 0.89
THUMPD2-202ENST00000403537 RMDN3Q96TC7 470 aa20.63■□□□□ 0.89
THUMPD2-202ENST00000403537 TMEM39AQ9NV64 488 aa20.63■□□□□ 0.89
THUMPD2-202ENST00000403537 POLR3EQ9NVU0 708 aa20.63■□□□□ 0.89
THUMPD2-202ENST00000403537 KPNA6O60684 536 aa20.62■□□□□ 0.89
THUMPD2-202ENST00000403537 CFBP00751 764 aa20.62■□□□□ 0.89
THUMPD2-202ENST00000403537 RAG1P15918 1043 aa20.62■□□□□ 0.89
THUMPD2-202ENST00000403537 CDK7P50613 346 aa20.62■□□□□ 0.89
THUMPD2-202ENST00000403537 HSD17B4P51659 736 aa20.62■□□□□ 0.89
THUMPD2-202ENST00000403537 BEX3Q00994 111 aa20.62■□□□□ 0.89
THUMPD2-202ENST00000403537 ANKRD1Q15327 319 aa20.62■□□□□ 0.89
THUMPD2-202ENST00000403537 STXBP2Q15833 593 aa20.62■□□□□ 0.89
THUMPD2-202ENST00000403537 NTRK3Q16288 839 aa20.62■□□□□ 0.89
THUMPD2-202ENST00000403537 PHKBQ93100 1093 aa20.62■□□□□ 0.89
THUMPD2-202ENST00000403537 ARHGEF16Q5VV41 709 aa20.61■□□□□ 0.89
THUMPD2-202ENST00000403537 OR6J1Q8NGC5 347 aa20.61■□□□□ 0.89
THUMPD2-202ENST00000403537 DDX49Q9Y6V7 483 aaKnown RBP20.61■□□□□ 0.89
THUMPD2-202ENST00000403537 LRRC37A2A6NM11 1700 aa20.61■□□□□ 0.89
THUMPD2-202ENST00000403537 TRIM43BA6NCK2 446 aa20.6■□□□□ 0.89
THUMPD2-202ENST00000403537 PFKFB2O60825 505 aa20.6■□□□□ 0.89
THUMPD2-202ENST00000403537 FAAP100Q0VG06 881 aa20.6■□□□□ 0.89
THUMPD2-202ENST00000403537 CXCL17Q6UXB2 119 aa20.6■□□□□ 0.89
THUMPD2-202ENST00000403537 SLC43A3Q8NBI5 491 aa20.6■□□□□ 0.89
THUMPD2-202ENST00000403537 BADQ92934 168 aa20.6■□□□□ 0.89
THUMPD2-202ENST00000403537 TRIM43Q96BQ3 446 aaPredicted RBP20.6■□□□□ 0.89
THUMPD2-202ENST00000403537 RRP36Q96EU6 259 aaKnown RBP20.6■□□□□ 0.89
THUMPD2-202ENST00000403537 TAAR1Q96RJ0 339 aa20.6■□□□□ 0.89
THUMPD2-202ENST00000403537 SLKQ9H2G2 1235 aaPredicted RBP20.6■□□□□ 0.89
THUMPD2-202ENST00000403537 SEC63Q9UGP8 760 aaKnown RBP20.6■□□□□ 0.89
THUMPD2-202ENST00000403537 DNAH12Q6ZR08 3092 aa20.59■□□□□ 0.89
THUMPD2-202ENST00000403537 GCOM1H8Y6P7 765 aaPredicted RBP20.59■□□□□ 0.89
THUMPD2-202ENST00000403537 OPLAHO14841 1288 aa20.59■□□□□ 0.89
THUMPD2-202ENST00000403537 EIF3JO75822 258 aaKnown RBP20.59■□□□□ 0.89
THUMPD2-202ENST00000403537 POLR2MP0CAP2 368 aa20.59■□□□□ 0.89
THUMPD2-202ENST00000403537 TXNP10599 105 aaKnown RBP20.59■□□□□ 0.89
THUMPD2-202ENST00000403537 IRX5P78411 483 aaPredicted RBP20.59■□□□□ 0.89
THUMPD2-202ENST00000403537 SH3RF1Q7Z6J0 888 aa20.59■□□□□ 0.89
THUMPD2-202ENST00000403537 TBC1D5Q92609 795 aa20.59■□□□□ 0.89
THUMPD2-202ENST00000403537 GPKOWQ92917 476 aaPredicted RBP eCLIP20.59■□□□□ 0.89
THUMPD2-202ENST00000403537 V9GY48 417 aaPredicted RBP20.59■□□□□ 0.89
THUMPD2-202ENST00000403537 CTDNEP1O95476 244 aa20.58■□□□□ 0.89
THUMPD2-202ENST00000403537 ITGA7Q13683 1181 aa20.58■□□□□ 0.89
THUMPD2-202ENST00000403537 GTF3C6Q969F1 213 aa20.58■□□□□ 0.89
THUMPD2-202ENST00000403537 PXMP2Q9NR77 195 aa20.58■□□□□ 0.89
THUMPD2-202ENST00000403537 COL20A1Q9P218 1284 aa20.58■□□□□ 0.89
THUMPD2-202ENST00000403537 TBX21Q9UL17 535 aa20.58■□□□□ 0.89
THUMPD2-202ENST00000403537 LIMCH1Q9UPQ0 1083 aa20.58■□□□□ 0.89
THUMPD2-202ENST00000403537 CCDC196A0A1B0GTZ2 297 aa20.57■□□□□ 0.88
THUMPD2-202ENST00000403537 A6NJR5 290 aa20.57■□□□□ 0.88
THUMPD2-202ENST00000403537 TIMP1P01033 207 aa20.57■□□□□ 0.88
THUMPD2-202ENST00000403537 NR3C2P08235 984 aa20.57■□□□□ 0.88
THUMPD2-202ENST00000403537 FPGSQ05932 587 aa20.57■□□□□ 0.88
THUMPD2-202ENST00000403537 WWC2Q6AWC2 1192 aa20.57■□□□□ 0.88
THUMPD2-202ENST00000403537 KCNV1Q6PIU1 500 aa20.57■□□□□ 0.88
THUMPD2-202ENST00000403537 FAM126BQ8IXS8 530 aa20.57■□□□□ 0.88
THUMPD2-202ENST00000403537 MTG1Q9BT17 334 aaPredicted RBP20.57■□□□□ 0.88
THUMPD2-202ENST00000403537 SLC26A6Q9BXS9 759 aa20.57■□□□□ 0.88
THUMPD2-202ENST00000403537 ST18O60284 1047 aa20.56■□□□□ 0.88
THUMPD2-202ENST00000403537 GH1P01241 217 aa20.56■□□□□ 0.88
THUMPD2-202ENST00000403537 IFNAR1P17181 557 aa20.56■□□□□ 0.88
THUMPD2-202ENST00000403537 EIF2AK2P19525 551 aaKnown RBP20.56■□□□□ 0.88
THUMPD2-202ENST00000403537 PKN1Q16512 942 aa20.56■□□□□ 0.88
THUMPD2-202ENST00000403537 TYW1BQ6NUM6 668 aa20.56■□□□□ 0.88
THUMPD2-202ENST00000403537 CCDC62Q6P9F0 684 aa20.56■□□□□ 0.88
THUMPD2-202ENST00000403537 HEATR3Q7Z4Q2 680 aa20.56■□□□□ 0.88
THUMPD2-202ENST00000403537 SOX1O00570 391 aaPredicted RBP20.55■□□□□ 0.88
THUMPD2-202ENST00000403537 CPLX1O14810 134 aa20.55■□□□□ 0.88
THUMPD2-202ENST00000403537 SUPT20HL2P0C7V6 817 aa20.55■□□□□ 0.88
THUMPD2-202ENST00000403537 PURAQ00577 322 aaKnown RBP20.55■□□□□ 0.88
THUMPD2-202ENST00000403537 MFSD5Q6N075 450 aa20.55■□□□□ 0.88
THUMPD2-202ENST00000403537 SEPT14Q6ZU15 432 aa20.55■□□□□ 0.88
THUMPD2-202ENST00000403537 CCDC83Q8IWF9 413 aa20.55■□□□□ 0.88
THUMPD2-202ENST00000403537 CUL5Q93034 780 aa20.55■□□□□ 0.88
THUMPD2-202ENST00000403537 PDCD2LQ9BRP1 358 aa20.55■□□□□ 0.88
THUMPD2-202ENST00000403537 JAK2O60674 1132 aa20.54■□□□□ 0.88
THUMPD2-202ENST00000403537 STAM2O75886 525 aa20.54■□□□□ 0.88
THUMPD2-202ENST00000403537 CD4P01730 458 aa20.54■□□□□ 0.88
THUMPD2-202ENST00000403537 MYL3P08590 195 aa20.54■□□□□ 0.88
THUMPD2-202ENST00000403537 CCND2P30279 289 aa20.54■□□□□ 0.88
THUMPD2-202ENST00000403537 PPIGQ13427 754 aaKnown RBP eCLIP20.54■□□□□ 0.88
THUMPD2-202ENST00000403537 TMEM63BQ5T3F8 832 aa20.54■□□□□ 0.88
THUMPD2-202ENST00000403537 TMEM199Q8N511 208 aa20.54■□□□□ 0.88
THUMPD2-202ENST00000403537 AIFM3Q96NN9 605 aa20.54■□□□□ 0.88
THUMPD2-202ENST00000403537 MRVI1Q9Y6F6 885 aa20.54■□□□□ 0.88
THUMPD2-202ENST00000403537 LTBP2Q14767 1821 aa20.53■□□□□ 0.88
THUMPD2-202ENST00000403537 STXBP3O00186 592 aa20.53■□□□□ 0.88
THUMPD2-202ENST00000403537 PRPF3O43395 683 aaKnown RBP20.53■□□□□ 0.88
THUMPD2-202ENST00000403537 TGFB3P10600 412 aa20.53■□□□□ 0.88
THUMPD2-202ENST00000403537 HOXA13P31271 388 aaPredicted RBP20.53■□□□□ 0.88
THUMPD2-202ENST00000403537 PTPN11Q06124 597 aaPredicted RBP20.53■□□□□ 0.88
THUMPD2-202ENST00000403537 VSIG10LQ86VR7 867 aa20.53■□□□□ 0.88
THUMPD2-202ENST00000403537 TEX2Q8IWB9 1127 aa20.53■□□□□ 0.88
THUMPD2-202ENST00000403537 NSUN7Q8NE18 718 aaKnown RBP20.53■□□□□ 0.88
THUMPD2-202ENST00000403537 EMID1Q96A84 441 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms