RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 QPCTQ16769 361 aa18.85■□□□□ 0.61
PTPRA-205ENST00000399903 KDM7AQ6ZMT4 941 aa18.85■□□□□ 0.61
PTPRA-205ENST00000399903 FUKQ8N0W3 1084 aa18.85■□□□□ 0.61
PTPRA-205ENST00000399903 ATP6V1G3Q96LB4 118 aa18.85■□□□□ 0.61
PTPRA-205ENST00000399903 NARFQ9UHQ1 456 aa18.85■□□□□ 0.61
PTPRA-205ENST00000399903 DNM2P50570 870 aa18.85■□□□□ 0.61
PTPRA-205ENST00000399903 STAG1Q8WVM7 1258 aa18.85■□□□□ 0.61
PTPRA-205ENST00000399903 UBLCP1Q8WVY7 318 aaPredicted RBP18.85■□□□□ 0.61
PTPRA-205ENST00000399903 MYH7P12883 1935 aa18.85■□□□□ 0.61
PTPRA-205ENST00000399903 PHF20L1A8MW92 1017 aa18.85■□□□□ 0.61
PTPRA-205ENST00000399903 PLEKHA8P1O95397 391 aa18.85■□□□□ 0.61
PTPRA-205ENST00000399903 BRD2P25440 801 aaKnown RBP18.85■□□□□ 0.61
PTPRA-205ENST00000399903 SF3B3Q15393 1217 aaKnown RBP18.85■□□□□ 0.61
PTPRA-205ENST00000399903 ACCSLQ4AC99 568 aa18.85■□□□□ 0.61
PTPRA-205ENST00000399903 RRAGAQ7L523 313 aa18.85■□□□□ 0.61
PTPRA-205ENST00000399903 FERMT2Q96AC1 680 aa18.85■□□□□ 0.61
PTPRA-205ENST00000399903 WDR19Q8NEZ3 1342 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 RPS6KA4O75676 772 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 RASSF9O75901 435 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 FAM107AO95990 144 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 LIFRP42702 1097 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 NLRP5P59047 1200 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 MECOMQ03112 1051 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 MYO1EQ12965 1108 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 TANGO6Q9C0B7 1094 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 RMND1Q9NWS8 449 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 NKRFO15226 690 aaKnown RBP eCLIP18.84■□□□□ 0.61
PTPRA-205ENST00000399903 TCP1P17987 556 aaKnown RBP18.84■□□□□ 0.61
PTPRA-205ENST00000399903 KIF11P52732 1056 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 TPTE2Q6XPS3 522 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 DDX42Q86XP3 938 aaKnown RBP eCLIP18.84■□□□□ 0.61
PTPRA-205ENST00000399903 TNKSO95271 1327 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 STK36Q9NRP7 1315 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 A6NNZ2 444 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 GRIK5Q16478 980 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 TUBB8Q3ZCM7 444 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 HPS3Q969F9 1004 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 OSBPL7Q9BZF2 842 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 LRRC4BQ9NT99 713 aa18.84■□□□□ 0.61
PTPRA-205ENST00000399903 GCOM1H8Y6P7 765 aaPredicted RBP18.83■□□□□ 0.61
PTPRA-205ENST00000399903 HGSO14964 777 aaPredicted RBP18.83■□□□□ 0.61
PTPRA-205ENST00000399903 MYZAPP0CAP1 466 aa18.83■□□□□ 0.61
PTPRA-205ENST00000399903 HIBADHP31937 336 aaKnown RBP18.83■□□□□ 0.61
PTPRA-205ENST00000399903 SARNPP82979 210 aaKnown RBP18.83■□□□□ 0.61
PTPRA-205ENST00000399903 ZBED6P86452 979 aa18.83■□□□□ 0.61
PTPRA-205ENST00000399903 DIXDC1Q155Q3 683 aa18.83■□□□□ 0.61
PTPRA-205ENST00000399903 CFAP221Q4G0U5 840 aa18.83■□□□□ 0.61
PTPRA-205ENST00000399903 CNOT6LQ96LI5 555 aaKnown RBP18.83■□□□□ 0.61
PTPRA-205ENST00000399903 TACO1Q9BSH4 297 aaKnown RBP18.83■□□□□ 0.61
PTPRA-205ENST00000399903 SMIM23A6NLE4 172 aa18.83■□□□□ 0.6
PTPRA-205ENST00000399903 GFPT1Q06210 699 aaPredicted RBP18.83■□□□□ 0.6
PTPRA-205ENST00000399903 UBE4AQ14139 1066 aa18.83■□□□□ 0.6
PTPRA-205ENST00000399903 CACNA2D3Q8IZS8 1091 aa18.83■□□□□ 0.6
PTPRA-205ENST00000399903 SHISA4Q96DD7 197 aa18.83■□□□□ 0.6
PTPRA-205ENST00000399903 RIOK1Q9BRS2 568 aaKnown RBP18.83■□□□□ 0.6
PTPRA-205ENST00000399903 TSGA10Q9BZW7 698 aa18.83■□□□□ 0.6
PTPRA-205ENST00000399903 A1CFQ9NQ94 594 aaKnown RBP18.83■□□□□ 0.6
PTPRA-205ENST00000399903 MYH13Q9UKX3 1938 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 GMNCA6NCL1 334 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 EPB41P11171 864 aaKnown RBP18.82■□□□□ 0.6
PTPRA-205ENST00000399903 FMNL3Q8IVF7 1028 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 SGSM3Q96HU1 749 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 FAXDC2Q96IV6 333 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 KRT23Q9C075 422 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 NLRC4Q9NPP4 1024 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 COL22A1Q8NFW1 1626 aaPredicted RBP18.82■□□□□ 0.6
PTPRA-205ENST00000399903 ATRNO75882 1429 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 C21orf2O43822 256 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 EHHADHQ08426 723 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 FAM228AQ86W67 206 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 RASGRP4Q8TDF6 673 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.82■□□□□ 0.6
PTPRA-205ENST00000399903 SH2D4AQ9H788 454 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 SALL4Q9UJQ4 1053 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 PPP1R12AO14974 1030 aaPredicted RBP18.82■□□□□ 0.6
PTPRA-205ENST00000399903 CTNNA1P35221 906 aaKnown RBP18.82■□□□□ 0.6
PTPRA-205ENST00000399903 ALX1Q15699 326 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 CACNA2D4Q7Z3S7 1137 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 CASKIN2Q8WXE0 1202 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 SPDL1Q96EA4 605 aa18.82■□□□□ 0.6
PTPRA-205ENST00000399903 NOVA2Q9UNW9 492 aaKnown RBP18.82■□□□□ 0.6
PTPRA-205ENST00000399903 NRAPQ86VF7 1730 aa18.81■□□□□ 0.6
PTPRA-205ENST00000399903 CCNHP51946 323 aaPredicted RBP18.81■□□□□ 0.6
PTPRA-205ENST00000399903 CCDC170Q8IYT3 715 aa18.81■□□□□ 0.6
PTPRA-205ENST00000399903 MICAL1Q8TDZ2 1067 aa18.81■□□□□ 0.6
PTPRA-205ENST00000399903 RSRC1Q96IZ7 334 aaKnown RBP18.81■□□□□ 0.6
PTPRA-205ENST00000399903 L3MBTL1Q9Y468 752 aa18.81■□□□□ 0.6
PTPRA-205ENST00000399903 ENO4A6NNW6 628 aa18.81■□□□□ 0.6
PTPRA-205ENST00000399903 IQCKQ8N0W5 287 aa18.81■□□□□ 0.6
PTPRA-205ENST00000399903 SEC16BQ96JE7 1060 aa18.81■□□□□ 0.6
PTPRA-205ENST00000399903 GGT7Q9UJ14 662 aa18.81■□□□□ 0.6
PTPRA-205ENST00000399903 TRAPPC3LQ5T215 181 aa18.8■□□□□ 0.6
PTPRA-205ENST00000399903 HVCN1Q96D96 273 aa18.8■□□□□ 0.6
PTPRA-205ENST00000399903 STAMBPL1Q96FJ0 436 aa18.8■□□□□ 0.6
PTPRA-205ENST00000399903 ARHGAP20Q9P2F6 1191 aa18.8■□□□□ 0.6
PTPRA-205ENST00000399903 DDX60Q8IY21 1712 aaKnown RBP18.8■□□□□ 0.6
PTPRA-205ENST00000399903 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.8■□□□□ 0.6
PTPRA-205ENST00000399903 UBA7P41226 1012 aa18.8■□□□□ 0.6
PTPRA-205ENST00000399903 SCTRP47872 440 aa18.8■□□□□ 0.6
PTPRA-205ENST00000399903 PDXDC2PQ6P474 469 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms