RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 HVCN1Q96D96 273 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 ELP3Q9H9T3 547 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 KMT5AQ9NQR1 393 aa11.92□□□□□ -0.5
CACNA1C-216ENST00000399638 KDM5AP29375 1690 aaKnown RBP11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 ELP1O95163 1332 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 HNRNPDLO14979 420 aaKnown RBP11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 UBE3AQ05086 875 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 RFX6Q8HWS3 928 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 FAM178BQ8IXR5 827 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 MCUR1Q96AQ8 359 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 ATP10AO60312 1499 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 THAP12O43422 761 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 IFNB1P01574 187 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 TECP42680 631 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 PBXIP1Q96AQ6 731 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 NT5C3AQ9H0P0 336 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 ASMTLO95671 621 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 CAPN2P17655 700 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 CCDC85BQ15834 202 aaPredicted RBP11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 TMC4Q7Z404 712 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 TSPYL6Q8N831 410 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 RPF1Q9H9Y2 349 aaKnown RBP11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 MAP3K20Q9NYL2 800 aaKnown RBP11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 FIS1Q9Y3D6 152 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 HHATQ5VTY9 493 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 CEP85Q6P2H3 762 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 TEX2Q8IWB9 1127 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 CEP170P1Q96L14 293 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 DBNDD2Q9BQY9 259 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 SRP68Q9UHB9 627 aaKnown RBP11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 ATP8B1O43520 1251 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 HLA-DPA1P20036 260 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 SKOR1P84550 965 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 KRT24Q2M2I5 525 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 ANO4Q32M45 955 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 MCTP2Q6DN12 878 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 PDXDC2PQ6P474 469 aa11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 NXF1Q9UBU9 619 aaKnown RBP11.91□□□□□ -0.5
CACNA1C-216ENST00000399638 SASH1O94885 1247 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 CYP4A11Q02928 519 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 BRAPQ7Z569 592 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 CNGA4Q8IV77 575 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 CCDC105Q8IYK2 499 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 RAB23Q9ULC3 237 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 PCDHA12Q9UN75 941 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 TTC37Q6PGP7 1564 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 MAP3K19Q56UN5 1328 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 COG4Q9H9E3 785 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 LEMD3Q9Y2U8 911 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 MAD1L1Q9Y6D9 718 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 ARHGAP42A6NI28 874 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 NPM3O75607 178 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 MYL1P05976 194 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 HUNKP57058 714 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 IRX4P78413 519 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 GPR101Q96P66 508 aaPredicted RBP11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 RASSF4Q9H2L5 321 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 BBOX1O75936 387 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 BTBD8Q5XKL5 378 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 ARMCX2Q7L311 632 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 TEKT4Q8WW24 435 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 TRAIPQ9BWF2 469 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 BCL2L12Q9HB09 334 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 SUCLA2Q9P2R7 463 aaPredicted RBP11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 ATP10BO94823 1461 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 SNAP25P60880 206 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 ST8SIA6P61647 398 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 CAPN12Q6ZSI9 719 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 PPHLN1Q8NEY8 458 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 CFAP36Q96G28 342 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 VPS54Q9P1Q0 977 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 IMPACTQ9P2X3 320 aa11.9□□□□□ -0.5
CACNA1C-216ENST00000399638 N4BP1O75113 896 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 ALDH1A1P00352 501 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 PSAPP07602 524 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 WASHC5Q12768 1159 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 TMED1Q13445 227 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 PPP2R5BQ15173 497 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 PHLDB2Q86SQ0 1253 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 ZNF335Q9H4Z2 1342 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 GARSP41250 739 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 TNNQ9UQP3 1299 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 ACTN4O43707 911 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 MOCS3O95396 460 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 THOC5Q13769 683 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 LMNTD2Q8IXW0 634 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 PPM1KQ8N3J5 372 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 KRT82Q9NSB4 513 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 PANK4Q9NVE7 773 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 SERPINI2O75830 405 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 PPARGP37231 505 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 SCARA5Q6ZMJ2 495 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 PHKBQ93100 1093 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 CDHR1Q96JP9 859 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 RPGRIP1Q96KN7 1286 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 LSM14BQ9BX40 385 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 HPS4Q9NQG7 708 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 FAF1Q9UNN5 650 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 TSPOAP1O95153 1857 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 KDM6BO15054 1643 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms