RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 KCNF1Q9H3M0 494 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 RPAP3Q9H6T3 665 aaPredicted RBP17.01■□□□□ 0.31
COL25A1-201ENST00000399126 KCNMB3Q9NPA1 279 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 IFNKQ9P0W0 207 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 MAPK8IP1Q9UQF2 711 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 PARP14Q460N5 1801 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 PIK3CDO00329 1044 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 ILDR2Q71H61 639 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 SNX29Q8TEQ0 813 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 HOOK2Q96ED9 719 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 XPO4Q9C0E2 1151 aaKnown RBP17■□□□□ 0.31
COL25A1-201ENST00000399126 RAVER2Q9HCJ3 691 aaKnown RBP17■□□□□ 0.31
COL25A1-201ENST00000399126 PICK1Q9NRD5 415 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 HOMER2Q9NSB8 354 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 CCPG1Q9ULG6 757 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 GDAQ9Y2T3 454 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 CYP3A7-CYP3A51PA0A087WV96 503 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 PPP1R3GB7ZBB8 358 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 NFIBO00712 420 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 CYP3A7P24462 503 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 HMGCS2P54868 508 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 CCDC186Q7Z3E2 898 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 PRPF38AQ8NAV1 312 aaKnown RBP17■□□□□ 0.31
COL25A1-201ENST00000399126 MBOAT7Q96N66 472 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 BLOC1S4Q9NUP1 217 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 PCDHA12Q9UN75 941 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 NFE2L3Q9Y4A8 694 aa17■□□□□ 0.31
COL25A1-201ENST00000399126 BACE1P56817 501 aa16.99■□□□□ 0.31
COL25A1-201ENST00000399126 ZNF280CQ8ND82 737 aa16.99■□□□□ 0.31
COL25A1-201ENST00000399126 ETNPPLQ8TBG4 499 aa16.99■□□□□ 0.31
COL25A1-201ENST00000399126 MRFAP1L1Q96HT8 127 aa16.99■□□□□ 0.31
COL25A1-201ENST00000399126 ADARB2Q9NS39 739 aaKnown RBP16.99■□□□□ 0.31
COL25A1-201ENST00000399126 KLRC4O43908 158 aa16.99■□□□□ 0.31
COL25A1-201ENST00000399126 FOSP01100 380 aaPredicted RBP16.99■□□□□ 0.31
COL25A1-201ENST00000399126 MSNP26038 577 aaKnown RBP16.99■□□□□ 0.31
COL25A1-201ENST00000399126 SAMSN1Q9NSI8 373 aaKnown RBP16.99■□□□□ 0.31
COL25A1-201ENST00000399126 COL11A1P12107 1806 aaPredicted RBP16.98■□□□□ 0.31
COL25A1-201ENST00000399126 GCOM1H8Y6P7 765 aaPredicted RBP16.98■□□□□ 0.31
COL25A1-201ENST00000399126 ICAM1P05362 532 aa16.98■□□□□ 0.31
COL25A1-201ENST00000399126 POLR2MP0CAP2 368 aa16.98■□□□□ 0.31
COL25A1-201ENST00000399126 FANCCQ00597 558 aa16.98■□□□□ 0.31
COL25A1-201ENST00000399126 PDIA5Q14554 519 aa16.98■□□□□ 0.31
COL25A1-201ENST00000399126 ARID5BQ14865 1188 aa16.98■□□□□ 0.31
COL25A1-201ENST00000399126 CALML4Q96GE6 196 aa16.98■□□□□ 0.31
COL25A1-201ENST00000399126 RLFQ13129 1914 aa16.98■□□□□ 0.31
COL25A1-201ENST00000399126 USP2O75604 605 aaPredicted RBP16.98■□□□□ 0.31
COL25A1-201ENST00000399126 SLC20A2Q08357 652 aa16.98■□□□□ 0.31
COL25A1-201ENST00000399126 MCM6Q14566 821 aa16.98■□□□□ 0.31
COL25A1-201ENST00000399126 KMT5BQ4FZB7 885 aa16.98■□□□□ 0.31
COL25A1-201ENST00000399126 EXOC8Q8IYI6 725 aa16.98■□□□□ 0.31
COL25A1-201ENST00000399126 WDR18Q9BV38 432 aa16.98■□□□□ 0.31
COL25A1-201ENST00000399126 SLC38A10Q9HBR0 1119 aa16.98■□□□□ 0.31
COL25A1-201ENST00000399126 GINM1Q9NU53 330 aa16.98■□□□□ 0.31
COL25A1-201ENST00000399126 COL20A1Q9P218 1284 aa16.98■□□□□ 0.31
COL25A1-201ENST00000399126 MRPL11Q9Y3B7 192 aaKnown RBP16.98■□□□□ 0.31
COL25A1-201ENST00000399126 ALAS1P13196 640 aa16.97■□□□□ 0.31
COL25A1-201ENST00000399126 LRMPQ12912 555 aa16.97■□□□□ 0.31
COL25A1-201ENST00000399126 MUM1L1Q5H9M0 696 aa16.97■□□□□ 0.31
COL25A1-201ENST00000399126 KRT79Q5XKE5 535 aa16.97■□□□□ 0.31
COL25A1-201ENST00000399126 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.97■□□□□ 0.31
COL25A1-201ENST00000399126 C17orf53Q8N3J3 647 aaPredicted RBP16.97■□□□□ 0.31
COL25A1-201ENST00000399126 ATG4CQ96DT6 458 aa16.97■□□□□ 0.31
COL25A1-201ENST00000399126 TRIM9Q9C026 710 aa16.97■□□□□ 0.31
COL25A1-201ENST00000399126 PPP1R9AQ9ULJ8 1098 aa16.97■□□□□ 0.31
COL25A1-201ENST00000399126 CTNND2Q9UQB3 1225 aa16.97■□□□□ 0.31
COL25A1-201ENST00000399126 MSH4O15457 936 aa16.97■□□□□ 0.31
COL25A1-201ENST00000399126 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.97■□□□□ 0.31
COL25A1-201ENST00000399126 ENOX1Q8TC92 643 aaKnown RBP16.97■□□□□ 0.31
COL25A1-201ENST00000399126 CLEC4DQ8WXI8 215 aa16.97■□□□□ 0.31
COL25A1-201ENST00000399126 HPS3Q969F9 1004 aa16.97■□□□□ 0.31
COL25A1-201ENST00000399126 RAB34Q9BZG1 259 aa16.97■□□□□ 0.31
COL25A1-201ENST00000399126 DACH1Q9UI36 760 aa16.97■□□□□ 0.31
COL25A1-201ENST00000399126 OTOFQ9HC10 1997 aa16.97■□□□□ 0.31
COL25A1-201ENST00000399126 ABCB11O95342 1321 aa16.97■□□□□ 0.31
COL25A1-201ENST00000399126 TPM4P67936 248 aa16.96■□□□□ 0.31
COL25A1-201ENST00000399126 SPIRE1Q08AE8 756 aa16.96■□□□□ 0.31
COL25A1-201ENST00000399126 MOXD1Q6UVY6 613 aa16.96■□□□□ 0.31
COL25A1-201ENST00000399126 FILIP1Q7Z7B0 1213 aa16.96■□□□□ 0.31
COL25A1-201ENST00000399126 CDK5RAP3Q96JB5 506 aa16.96■□□□□ 0.31
COL25A1-201ENST00000399126 SYNRGQ9UMZ2 1314 aa16.96■□□□□ 0.31
COL25A1-201ENST00000399126 IGLV3-22A0A075B6J6 115 aa16.96■□□□□ 0.31
COL25A1-201ENST00000399126 CDC25BP30305 580 aa16.96■□□□□ 0.31
COL25A1-201ENST00000399126 ZNF76P36508 570 aa16.96■□□□□ 0.31
COL25A1-201ENST00000399126 Q4G0T1 1027 aa16.96■□□□□ 0.31
COL25A1-201ENST00000399126 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.96■□□□□ 0.31
COL25A1-201ENST00000399126 NAP1L4Q99733 375 aaKnown RBP16.96■□□□□ 0.31
COL25A1-201ENST00000399126 PPP2R3BQ9Y5P8 575 aa16.96■□□□□ 0.31
COL25A1-201ENST00000399126 POTEB3A0JP26 581 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 POTECB2RU33 542 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 ZNF18P17022 549 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 CIITAP33076 1130 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 PRCPP42785 496 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 USP14P54578 494 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 VGLL4Q14135 290 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 SUPT20HL1Q3ZLR7 823 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 TMEM119Q4V9L6 283 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 ZNF658Q5TYW1 1059 aaPredicted RBP16.95■□□□□ 0.3
COL25A1-201ENST00000399126 POTEBQ6S5H4 581 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 MYMKA6NI61 221 aa16.95■□□□□ 0.3
COL25A1-201ENST00000399126 ERCC5P28715 1186 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms