RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 XRRA1Q6P2D8 792 aa11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 FBXO16Q8IX29 292 aaPredicted RBP11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 IL31RAQ8NI17 732 aa11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 ALG1Q9BT22 464 aa11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 OGDHLQ9ULD0 1010 aa11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 PCDHA4Q9UN74 947 aa11.97□□□□□ -0.49
CYCSP55-201ENST00000399027 ALPK3Q96L96 1907 aa11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 DUSP11O75319 330 aaKnown RBP11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 RGS20O76081 388 aa11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 SREBF1P36956 1147 aa11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 ADCYAP1R1P41586 468 aa11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 NLRP5P59047 1200 aa11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 CUL4AQ13619 759 aa11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 EEPD1Q7L9B9 569 aa11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 BLIDQ8IZY5 108 aa11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 REXO1Q8N1G1 1221 aaKnown RBP11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 ANKLE1Q8NAG6 615 aa11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 CRYGNQ8WXF5 182 aa11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 ANO3Q9BYT9 981 aa11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 EHMT1Q9H9B1 1298 aa11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 PDGFCQ9NRA1 345 aa11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 TMEM260Q9NX78 707 aa11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 GNEQ9Y223 722 aaKnown RBP11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 Q9Y3F1 56 aa11.96□□□□□ -0.49
CYCSP55-201ENST00000399027 WDR81Q562E7 1941 aa11.96□□□□□ -0.5
CYCSP55-201ENST00000399027 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.95□□□□□ -0.5
CYCSP55-201ENST00000399027 RARBP10826 455 aa11.95□□□□□ -0.5
CYCSP55-201ENST00000399027 MYCLP12524 364 aaPredicted RBP11.95□□□□□ -0.5
CYCSP55-201ENST00000399027 SMPD1P17405 629 aa11.95□□□□□ -0.5
CYCSP55-201ENST00000399027 TNFAIP2Q03169 654 aa11.95□□□□□ -0.5
CYCSP55-201ENST00000399027 DUSP28Q4G0W2 176 aa11.95□□□□□ -0.5
CYCSP55-201ENST00000399027 CCDC62Q6P9F0 684 aa11.95□□□□□ -0.5
CYCSP55-201ENST00000399027 SCFD2Q8WU76 684 aa11.95□□□□□ -0.5
CYCSP55-201ENST00000399027 INPP4AQ96PE3 977 aaPredicted RBP11.95□□□□□ -0.5
CYCSP55-201ENST00000399027 UPF3AQ9H1J1 476 aaKnown RBP11.95□□□□□ -0.5
CYCSP55-201ENST00000399027 GJB4Q9NTQ9 266 aa11.95□□□□□ -0.5
CYCSP55-201ENST00000399027 KCNJ14Q9UNX9 436 aa11.95□□□□□ -0.5
CYCSP55-201ENST00000399027 SYNRGQ9UMZ2 1314 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 K7ELQ4 463 aaPredicted RBP11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 NKRFO15226 690 aaKnown RBP eCLIP11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 ADAMTS4O75173 837 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 ARIH2O95376 493 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 MMP1P03956 469 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 CYP3A4P08684 503 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 EN2P19622 333 aaPredicted RBP11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 ICAM3P32942 547 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 SOX10P56693 466 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 GJA9P57773 515 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 TTLL4Q14679 1199 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 JAKMIP3Q5VZ66 844 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 ANO1Q5XXA6 986 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 KCNV1Q6PIU1 500 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 UBE2Q1Q7Z7E8 422 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 LENG1Q96BZ8 264 aaPredicted RBP11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 PGBD1Q96JS3 809 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 WDR11Q9BZH6 1224 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 XPNPEP3Q9NQH7 507 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 UBIAD1Q9Y5Z9 338 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 MYH15Q9Y2K3 1946 aa11.94□□□□□ -0.5
CYCSP55-201ENST00000399027 KIAA0100Q14667 2235 aaKnown RBP11.93□□□□□ -0.5
CYCSP55-201ENST00000399027 TFRCP02786 760 aaKnown RBP11.93□□□□□ -0.5
CYCSP55-201ENST00000399027 TGFB3P10600 412 aa11.93□□□□□ -0.5
CYCSP55-201ENST00000399027 CST5P28325 142 aaPredicted RBP11.93□□□□□ -0.5
CYCSP55-201ENST00000399027 ARHGAP4P98171 946 aa11.93□□□□□ -0.5
CYCSP55-201ENST00000399027 GNPTABQ3T906 1256 aa11.93□□□□□ -0.5
CYCSP55-201ENST00000399027 TMEM63BQ5T3F8 832 aa11.93□□□□□ -0.5
CYCSP55-201ENST00000399027 KRT40Q6A162 431 aa11.93□□□□□ -0.5
CYCSP55-201ENST00000399027 SEPT14Q6ZU15 432 aa11.93□□□□□ -0.5
CYCSP55-201ENST00000399027 FAM184AQ8NB25 1140 aa11.93□□□□□ -0.5
CYCSP55-201ENST00000399027 KLHDC9Q8NEP7 349 aa11.93□□□□□ -0.5
CYCSP55-201ENST00000399027 RASGRP4Q8TDF6 673 aa11.93□□□□□ -0.5
CYCSP55-201ENST00000399027 TNFRSF25Q93038 417 aa11.93□□□□□ -0.5
CYCSP55-201ENST00000399027 GPRASP2Q96D09 838 aa11.93□□□□□ -0.5
CYCSP55-201ENST00000399027 INTS4Q96HW7 963 aaKnown RBP11.93□□□□□ -0.5
CYCSP55-201ENST00000399027 DDX41Q9UJV9 622 aaKnown RBP11.93□□□□□ -0.5
CYCSP55-201ENST00000399027 SPDYE4A6NLX3 237 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 SPATA31C2B4DYI2 1134 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 DNM1LO00429 736 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 CTAGE5O15320 804 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 MAFGO15525 162 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 FIBPO43427 364 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 EDIL3O43854 480 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 TXNP10599 105 aaKnown RBP11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 ITGB5P18084 799 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 GJB2P29033 226 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 CIITAP33076 1130 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 KRT2P35908 639 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 RGS19P49795 217 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 USP11P51784 963 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 SEMA3FQ13275 785 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 TRIM29Q14134 588 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 LRRC41Q15345 812 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 CCSAPQ6IQ19 270 aaPredicted RBP11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 NIPA1Q7RTP0 329 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 KRT25Q7Z3Z0 450 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 RNF180Q86T96 592 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 TLK2Q86UE8 772 aa11.92□□□□□ -0.5
CYCSP55-201ENST00000399027 NLRX1Q86UT6 975 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms