RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 JMJD4Q9H9V9 463 aa14.08□□□□□ -0.16
TFF3-202ENST00000398431 VAT1LQ9HCJ6 419 aa14.08□□□□□ -0.16
TFF3-202ENST00000398431 RAPGEFL1Q9UHV5 662 aa14.08□□□□□ -0.16
TFF3-202ENST00000398431 OPLAHO14841 1288 aa14.07□□□□□ -0.16
TFF3-202ENST00000398431 LPXNO60711 386 aa14.07□□□□□ -0.16
TFF3-202ENST00000398431 KCNQ1P51787 676 aa14.07□□□□□ -0.16
TFF3-202ENST00000398431 CHMP4BP1P59074 171 aa14.07□□□□□ -0.16
TFF3-202ENST00000398431 STXBP2Q15833 593 aa14.07□□□□□ -0.16
TFF3-202ENST00000398431 CCDC178Q5BJE1 867 aa14.07□□□□□ -0.16
TFF3-202ENST00000398431 CHST3Q7LGC8 479 aa14.07□□□□□ -0.16
TFF3-202ENST00000398431 IQCA1Q86XH1 822 aa14.07□□□□□ -0.16
TFF3-202ENST00000398431 ZSCAN10Q96SZ4 725 aaPredicted RBP14.07□□□□□ -0.16
TFF3-202ENST00000398431 RMDN3Q96TC7 470 aa14.07□□□□□ -0.16
TFF3-202ENST00000398431 KAT14Q9H8E8 782 aa14.07□□□□□ -0.16
TFF3-202ENST00000398431 HDAC6Q9UBN7 1215 aa14.07□□□□□ -0.16
TFF3-202ENST00000398431 TANC1Q9C0D5 1861 aa14.07□□□□□ -0.16
TFF3-202ENST00000398431 TRANK1O15050 2925 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 MYH7BA7E2Y1 1941 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 LCHNA4D1U4 455 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 HAS3O00219 553 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 NBNO60934 754 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 EIF3JO75822 258 aaKnown RBP14.06□□□□□ -0.16
TFF3-202ENST00000398431 RGS20O76081 388 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 BAIAP3O94812 1187 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 CXCL10P02778 98 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 NR3C2P08235 984 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 CASTP20810 708 aaKnown RBP14.06□□□□□ -0.16
TFF3-202ENST00000398431 NT5C2P49902 561 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 MFAP1P55081 439 aaKnown RBP14.06□□□□□ -0.16
TFF3-202ENST00000398431 RBL2Q08999 1139 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 HIC1Q14526 733 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 TRIM71Q2Q1W2 868 aaKnown RBP14.06□□□□□ -0.16
TFF3-202ENST00000398431 ASPRV1Q53RT3 343 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 TRAF7Q6Q0C0 670 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 TMCO2Q7Z6W1 182 aaPredicted RBP14.06□□□□□ -0.16
TFF3-202ENST00000398431 CHD1LQ86WJ1 897 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 FBXO11Q86XK2 927 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 MCF2L2Q86YR7 1114 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 STAG2Q8N3U4 1231 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 CAGE1Q8TC20 777 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 AFAP1L1Q8TED9 768 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 ARNTL2Q8WYA1 636 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 EMID1Q96A84 441 aaPredicted RBP14.06□□□□□ -0.16
TFF3-202ENST00000398431 MTMR8Q96EF0 704 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 TSPYL2Q9H2G4 693 aaPredicted RBP14.06□□□□□ -0.16
TFF3-202ENST00000398431 GTF2IRD1Q9UHL9 959 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 NOD1Q9Y239 953 aa14.06□□□□□ -0.16
TFF3-202ENST00000398431 MRPL11Q9Y3B7 192 aaKnown RBP14.06□□□□□ -0.16
TFF3-202ENST00000398431 KIF28PB7ZC32 967 aa14.05□□□□□ -0.16
TFF3-202ENST00000398431 PPP1R11O60927 126 aaPredicted RBP14.05□□□□□ -0.16
TFF3-202ENST00000398431 PARP1P09874 1014 aaKnown RBP14.05□□□□□ -0.16
TFF3-202ENST00000398431 CKBP12277 381 aa14.05□□□□□ -0.16
TFF3-202ENST00000398431 SELPP16109 830 aa14.05□□□□□ -0.16
TFF3-202ENST00000398431 EIF2AK2P19525 551 aaKnown RBP14.05□□□□□ -0.16
TFF3-202ENST00000398431 HSD17B4P51659 736 aa14.05□□□□□ -0.16
TFF3-202ENST00000398431 WDR5P61964 334 aaKnown RBP14.05□□□□□ -0.16
TFF3-202ENST00000398431 GHRHRQ02643 423 aa14.05□□□□□ -0.16
TFF3-202ENST00000398431 NUCB1Q02818 461 aa14.05□□□□□ -0.16
TFF3-202ENST00000398431 GRB10Q13322 594 aa14.05□□□□□ -0.16
TFF3-202ENST00000398431 SLC35G1Q2M3R5 365 aa14.05□□□□□ -0.16
TFF3-202ENST00000398431 WNT8BQ93098 351 aa14.05□□□□□ -0.16
TFF3-202ENST00000398431 DSCC1Q9BVC3 393 aa14.05□□□□□ -0.16
TFF3-202ENST00000398431 IL25Q9H293 177 aa14.05□□□□□ -0.16
TFF3-202ENST00000398431 PXMP2Q9NR77 195 aa14.05□□□□□ -0.16
TFF3-202ENST00000398431 MYH6P13533 1939 aa14.05□□□□□ -0.16
TFF3-202ENST00000398431 LAMA4Q16363 1823 aa14.04□□□□□ -0.16
TFF3-202ENST00000398431 BDP1A6H8Y1 2624 aa14.04□□□□□ -0.16
TFF3-202ENST00000398431 GTPBP6O43824 516 aaPredicted RBP14.04□□□□□ -0.16
TFF3-202ENST00000398431 TLL1O43897 1013 aa14.04□□□□□ -0.16
TFF3-202ENST00000398431 HOXD8P13378 290 aaPredicted RBP14.04□□□□□ -0.16
TFF3-202ENST00000398431 PSEN2P49810 448 aa14.04□□□□□ -0.16
TFF3-202ENST00000398431 DEFB103AP81534 67 aa14.04□□□□□ -0.16
TFF3-202ENST00000398431 ZNF200P98182 395 aaPredicted RBP14.04□□□□□ -0.16
TFF3-202ENST00000398431 SEC23AQ15436 765 aa14.04□□□□□ -0.16
TFF3-202ENST00000398431 DGKDQ16760 1214 aa14.04□□□□□ -0.16
TFF3-202ENST00000398431 ARHGEF16Q5VV41 709 aa14.04□□□□□ -0.16
TFF3-202ENST00000398431 STOX1Q6ZVD7 989 aa14.04□□□□□ -0.16
TFF3-202ENST00000398431 LRRC8DQ7L1W4 858 aa14.04□□□□□ -0.16
TFF3-202ENST00000398431 ALG1Q9BT22 464 aa14.04□□□□□ -0.16
TFF3-202ENST00000398431 RWDD1Q9H446 243 aaPredicted RBP14.04□□□□□ -0.16
TFF3-202ENST00000398431 F2P00734 622 aa14.03□□□□□ -0.16
TFF3-202ENST00000398431 CFBP00751 764 aa14.03□□□□□ -0.16
TFF3-202ENST00000398431 SP2Q02086 613 aa14.03□□□□□ -0.16
TFF3-202ENST00000398431 AAMPQ13685 434 aa14.03□□□□□ -0.16
TFF3-202ENST00000398431 LAMC2Q13753 1193 aa14.03□□□□□ -0.16
TFF3-202ENST00000398431 MBTPS1Q14703 1052 aa14.03□□□□□ -0.16
TFF3-202ENST00000398431 MFSD10Q14728 455 aa14.03□□□□□ -0.16
TFF3-202ENST00000398431 SKIV2LQ15477 1246 aaKnown RBP14.03□□□□□ -0.16
TFF3-202ENST00000398431 MYSM1Q5VVJ2 828 aa14.03□□□□□ -0.16
TFF3-202ENST00000398431 CNKSR3Q6P9H4 555 aa14.03□□□□□ -0.16
TFF3-202ENST00000398431 CYB5R4Q7L1T6 521 aa14.03□□□□□ -0.16
TFF3-202ENST00000398431 VSIG10LQ86VR7 867 aa14.03□□□□□ -0.16
TFF3-202ENST00000398431 CCDC155Q8N6L0 562 aa14.03□□□□□ -0.16
TFF3-202ENST00000398431 PDCD2LQ9BRP1 358 aa14.03□□□□□ -0.16
TFF3-202ENST00000398431 MAD2L2Q9UI95 211 aa14.03□□□□□ -0.16
TFF3-202ENST00000398431 PALM3A6NDB9 673 aaPredicted RBP14.02□□□□□ -0.17
TFF3-202ENST00000398431 KLRF2D3W0D1 207 aa14.02□□□□□ -0.17
TFF3-202ENST00000398431 PPFIA4O75335 1185 aa14.02□□□□□ -0.17
TFF3-202ENST00000398431 PARNO95453 639 aaKnown RBP14.02□□□□□ -0.17
TFF3-202ENST00000398431 PTK7Q13308 1070 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms