RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 COBLO75128 1261 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 PRPF40AO75400 957 aaKnown RBP7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 NDUFB10O96000 172 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 HOXC6P09630 235 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 TSPY3P0CV98 308 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 TSPY8P0CW00 308 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 ACRP10323 421 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 ADORA2AP29274 412 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 NASPP49321 788 aaPredicted RBP7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 RABGGTBP53611 331 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 UBE2HP62256 183 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 TFAP4Q01664 338 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 KLRC3Q07444 240 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 TMEM132BQ14DG7 1078 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 CAVIN1Q6NZI2 390 aaKnown RBP7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 LRSAM1Q6UWE0 723 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 ZNF365Q70YC5 407 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 DPP9Q86TI2 863 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 LRRC47Q8N1G4 583 aaKnown RBP7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 FAM184AQ8NB25 1140 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 MYRIPQ8NFW9 859 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 NEDD1Q8NHV4 660 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 FBXL18Q96ME1 805 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 LLPHQ9BRT6 129 aaKnown RBP7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 MROH8Q9H579 483 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 TMEM39AQ9NV64 488 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 MTMR4Q9NYA4 1195 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 PPP1R9AQ9ULJ8 1098 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 PHF24Q9UPV7 400 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 TRPC6Q9Y210 931 aa7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.4□□□□□ -1.22
SMARCE1P6-201ENST00000398372 ZNF236Q9UL36 1845 aa7.4□□□□□ -1.23
SMARCE1P6-201ENST00000398372 ELP1O95163 1332 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 WDR19Q8NEZ3 1342 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 VWA5AO00534 786 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 SEPT4O43236 478 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 SLC25A27O95847 323 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 TTLL1O95922 423 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 TIMP1P01033 207 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 FGAP02671 866 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 CSF2RAP15509 400 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 SYT1P21579 422 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 CALRP27797 417 aaKnown RBP7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 STAT3P40763 770 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 ALX1Q15699 326 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 AAK1Q2M2I8 961 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 ADCK5Q3MIX3 580 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 SLFN13Q68D06 897 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 ZNF589Q86UQ0 364 aaPredicted RBP7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 RIOX2Q8IUF8 465 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 BANK1Q8NDB2 785 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 REPS2Q8NFH8 660 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 GPT2Q8TD30 523 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 MKL1Q969V6 931 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 SLF1Q9BQI6 1058 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 AGXT2Q9BYV1 514 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 CTNNA3Q9UI47 895 aa7.39□□□□□ -1.23
SMARCE1P6-201ENST00000398372 PLIN4Q96Q06 1357 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 A0A1W2PQ45 241 aaPredicted RBP7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 A0A1W2PQY0 241 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 EPOPA6NHQ4 379 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 TSPY2A6NKD2 308 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 VGLL3A8MV65 326 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 PRR33A8MZF0 331 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 KIF1CO43896 1103 aaKnown RBP7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 ORC4O43929 436 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 RANBP6O60518 1105 aaKnown RBP7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 ZBED4O75132 1171 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 PGK1P00558 417 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 HSPD1P10809 573 aaKnown RBP7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 FCER1AP12319 257 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 GJB2P29033 226 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 ME3Q16798 604 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 UVSSAQ2YD98 709 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 RRP12Q5JTH9 1297 aaKnown RBP7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 OLFML2BQ68BL8 750 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 MFSD5Q6N075 450 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 GAS2L3Q86XJ1 694 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 ABRAQ8N0Z2 381 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 PRPF38AQ8NAV1 312 aaKnown RBP7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 GMCL1P1Q8NEA9 526 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 MNS1Q8NEH6 495 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 LENG1Q96BZ8 264 aaPredicted RBP7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 NEK1Q96PY6 1258 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 UIMC1Q96RL1 719 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 MMP19Q99542 508 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 PANK2Q9BZ23 570 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 IL17RBQ9NRM6 502 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 TOMM22Q9NS69 142 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 SLC5A4Q9NY91 659 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 OGFRQ9NZT2 677 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 ANAPC4Q9UJX5 808 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 TBX21Q9UL17 535 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 ZNF214Q9UL59 606 aaPredicted RBP7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 SYNPO2Q9UMS6 1093 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 MTMR6Q9Y217 621 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 MTCH2Q9Y6C9 303 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 MCM3APO60318 1980 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 CACNA1AO00555 2505 aa7.38□□□□□ -1.23
SMARCE1P6-201ENST00000398372 PRRC2BQ5JSZ5 2229 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms