RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 CCDC40Q4G0X9 1142 aa17.68■□□□□ 0.42
CHMP1A-201ENST00000397901 MIIPQ5JXC2 388 aa17.68■□□□□ 0.42
CHMP1A-201ENST00000397901 FBXO33Q7Z6M2 555 aa17.68■□□□□ 0.42
CHMP1A-201ENST00000397901 AMIGO3Q86WK7 504 aa17.68■□□□□ 0.42
CHMP1A-201ENST00000397901 CCDC42Q96M95 316 aa17.68■□□□□ 0.42
CHMP1A-201ENST00000397901 TRIM9Q9C026 710 aa17.68■□□□□ 0.42
CHMP1A-201ENST00000397901 TRIM6Q9C030 488 aaPredicted RBP17.68■□□□□ 0.42
CHMP1A-201ENST00000397901 CPVLQ9H3G5 476 aa17.68■□□□□ 0.42
CHMP1A-201ENST00000397901 MLXIPQ9HAP2 919 aa17.68■□□□□ 0.42
CHMP1A-201ENST00000397901 MAD2L2Q9UI95 211 aa17.68■□□□□ 0.42
CHMP1A-201ENST00000397901 FLT1P17948 1338 aa17.68■□□□□ 0.42
CHMP1A-201ENST00000397901 ANO9A1A5B4 782 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 CYTH3O43739 400 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 ZEB2O60315 1214 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 EPB41P11171 864 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 ACTN3Q08043 901 aaPredicted RBP17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 SPA17Q15506 151 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 RETREG2Q8NC44 543 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 PSMB7Q99436 277 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 CCNL1Q9UK58 526 aaPredicted RBP17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 CAPN6Q9Y6Q1 641 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 A0A1B0GUA9 196 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 BICDL2A1A5D9 508 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 ZPR1O75312 459 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 GOLGA8HP0CJ92 632 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 MATR3P43243 847 aaKnown RBP eCLIP17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 LETM2Q2VYF4 491 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 GRIPAP1Q4V328 841 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 FAM182BQ5T319 152 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 NBPF5PQ86XG9 351 aaPredicted RBP17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 AENQ8WTP8 325 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 HDAC7Q8WUI4 952 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 CCDC47Q96A33 483 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 NLRP3Q96P20 1036 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 PURBQ96QR8 312 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 TCP11L1Q9NUJ3 509 aa17.67■□□□□ 0.42
CHMP1A-201ENST00000397901 STXBP3O00186 592 aa17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 CDR1P51861 262 aa17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 RPS8P62241 208 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 GRM4Q14833 912 aa17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 SBK1Q52WX2 424 aa17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 CCDC50Q8IVM0 306 aa17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 FAM114A1Q8IWE2 563 aa17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 SMARCAL1Q9NZC9 954 aa17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 CCNT1O60563 726 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 MOCS3O95396 460 aa17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 HIBADHP31937 336 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 SARNPP82979 210 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 FKBP15Q5T1M5 1219 aa17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 TTC19Q6DKK2 380 aaPredicted RBP17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 C2CD5Q86YS7 1000 aa17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 FAM207AQ9NSI2 230 aaPredicted RBP17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 RTCBQ9Y3I0 505 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-201ENST00000397901 EPHB6O15197 1021 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 NAP1L1P55209 391 aaKnown RBP17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 DRP2Q13474 957 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 NAIF1Q69YI7 327 aaPredicted RBP17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 IQCEQ6IPM2 695 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 SND1Q7KZF4 910 aaKnown RBP eCLIP17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 CREG2Q8IUH2 290 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 ARHGEF1Q92888 912 aaKnown RBP17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 RRP36Q96EU6 259 aaKnown RBP17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 IFIH1Q9BYX4 1025 aaKnown RBP17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 MKNK2Q9HBH9 465 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 SLC39A2Q9NP94 309 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 BARHL2Q9NY43 387 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 SNX12Q9UMY4 172 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 STX8Q9UNK0 236 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 SBF2Q86WG5 1849 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 SPATA31A6Q5VVP1 1343 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 LAMB1P07942 1786 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 OR52Z1P0C646 297 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 CXCR5P32302 372 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 TECP42680 631 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 BIRC2Q13490 618 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 CCDC70Q6NSX1 233 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 DGKHQ86XP1 1220 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 SLC44A5Q8NCS7 719 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 MAGEC3Q8TD91 643 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 LRRC1Q9BTT6 524 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 TSGA10Q9BZW7 698 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 SLC24A3Q9HC58 644 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 EHD2Q9NZN4 543 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 ARHGAP20Q9P2F6 1191 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 GGA2Q9UJY4 613 aa17.65■□□□□ 0.42
CHMP1A-201ENST00000397901 SLC7A5Q01650 507 aa17.64■□□□□ 0.42
CHMP1A-201ENST00000397901 DZIP1Q86YF9 867 aaKnown RBP17.64■□□□□ 0.42
CHMP1A-201ENST00000397901 DAGLBQ8NCG7 672 aa17.64■□□□□ 0.42
CHMP1A-201ENST00000397901 KIAA0895Q8NCT3 520 aa17.64■□□□□ 0.42
CHMP1A-201ENST00000397901 ERGIC2Q96RQ1 377 aa17.64■□□□□ 0.42
CHMP1A-201ENST00000397901 SEMA6BQ9H3T3 888 aa17.64■□□□□ 0.42
CHMP1A-201ENST00000397901 DMGDHQ9UI17 866 aaKnown RBP17.64■□□□□ 0.42
CHMP1A-201ENST00000397901 PCDHA13Q9Y5I0 950 aa17.64■□□□□ 0.42
CHMP1A-201ENST00000397901 USO1O60763 962 aaKnown RBP17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 RTN2O75298 545 aa17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 TACC1O75410 805 aa17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 TSPY3P0CV98 308 aa17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 TSPY8P0CW00 308 aa17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 EZRP15311 586 aaKnown RBP17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 TM4SF1P30408 202 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms