RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 TAAR1Q96RJ0 339 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 PYM1Q9BRP8 204 aaKnown RBP14.36□□□□□ -0.11
TRIM39-204ENST00000396548 VAV3Q9UKW4 847 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 MRPS9P82933 396 aaKnown RBP14.36□□□□□ -0.11
TRIM39-204ENST00000396548 POSTNQ15063 836 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 PRR16Q569H4 304 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 HYIQ5T013 277 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 KANK3Q6NY19 840 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 SLFN12Q8IYM2 578 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 GRAMD1CQ8IYS0 662 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 C2orf69Q8N8R5 385 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 FAM20AQ96MK3 541 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 PNMA5Q96PV4 448 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 EHMT1Q9H9B1 1298 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 CYP39A1Q9NYL5 469 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 RBPJLQ9UBG7 517 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 NIPA1Q7RTP0 329 aa14.35□□□□□ -0.11
TRIM39-204ENST00000396548 CABP7Q86V35 215 aa14.35□□□□□ -0.11
TRIM39-204ENST00000396548 IQUBQ8NA54 791 aa14.35□□□□□ -0.11
TRIM39-204ENST00000396548 SLC5A5Q92911 643 aa14.35□□□□□ -0.11
TRIM39-204ENST00000396548 NUDT12Q9BQG2 462 aa14.35□□□□□ -0.11
TRIM39-204ENST00000396548 PXMP2Q9NR77 195 aa14.35□□□□□ -0.11
TRIM39-204ENST00000396548 CTDP1Q9Y5B0 961 aaPredicted RBP14.35□□□□□ -0.11
TRIM39-204ENST00000396548 UBIAD1Q9Y5Z9 338 aa14.35□□□□□ -0.11
TRIM39-204ENST00000396548 POTEMA6NI47 508 aa14.35□□□□□ -0.11
TRIM39-204ENST00000396548 DPYDQ12882 1025 aa14.35□□□□□ -0.11
TRIM39-204ENST00000396548 GRB10Q13322 594 aa14.35□□□□□ -0.11
TRIM39-204ENST00000396548 BAATQ14032 418 aaPredicted RBP14.35□□□□□ -0.11
TRIM39-204ENST00000396548 PGM5Q15124 567 aa14.35□□□□□ -0.11
TRIM39-204ENST00000396548 CEP55Q53EZ4 464 aa14.35□□□□□ -0.11
TRIM39-204ENST00000396548 B3GNT9Q6UX72 402 aa14.35□□□□□ -0.11
TRIM39-204ENST00000396548 CHST13Q8NET6 341 aa14.35□□□□□ -0.11
TRIM39-204ENST00000396548 ZNF526Q8TF50 670 aaPredicted RBP14.35□□□□□ -0.11
TRIM39-204ENST00000396548 PURBQ96QR8 312 aaKnown RBP14.35□□□□□ -0.11
TRIM39-204ENST00000396548 ACAD9Q9H845 621 aa14.35□□□□□ -0.11
TRIM39-204ENST00000396548 TXNRD2Q9NNW7 524 aa14.35□□□□□ -0.11
TRIM39-204ENST00000396548 A0A087WWV3 80 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 ZBTB48P10074 688 aaPredicted RBP14.34□□□□□ -0.11
TRIM39-204ENST00000396548 BCRP11274 1271 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 ITGB5P18084 799 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 BMP6P22004 513 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 UBXN2AP68543 259 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 TMEM119Q4V9L6 283 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 L1TD1Q5T7N2 865 aaKnown RBP14.34□□□□□ -0.11
TRIM39-204ENST00000396548 SPRYD7Q5W111 196 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 SASS6Q6UVJ0 657 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 MXRA8Q9BRK3 442 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 A1CFQ9NQ94 594 aaKnown RBP14.34□□□□□ -0.11
TRIM39-204ENST00000396548 LRWD1Q9UFC0 647 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 PCDHA12Q9UN75 941 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 PCDHA5Q9Y5H7 936 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 SLC26A4O43511 780 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 ECM1Q16610 540 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 ANO6Q4KMQ2 910 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 C11orf57Q6ZUT1 292 aaPredicted RBP14.34□□□□□ -0.11
TRIM39-204ENST00000396548 BRI3BPQ8WY22 251 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 SPATC1LQ9H0A9 340 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 R3HDMLQ9H3Y0 253 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 KBTBD4Q9NVX7 518 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 TESPA1A2RU30 521 aaPredicted RBP14.34□□□□□ -0.11
TRIM39-204ENST00000396548 ASTN1O14525 1302 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 PSMD10O75832 226 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 GTF2A2P52657 109 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 STX1AQ16623 288 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 TMEM266Q2M3C6 531 aa14.34□□□□□ -0.11
TRIM39-204ENST00000396548 CETPP11597 493 aa14.33□□□□□ -0.12
TRIM39-204ENST00000396548 PLCG1P19174 1290 aa14.33□□□□□ -0.12
TRIM39-204ENST00000396548 UBA7P41226 1012 aa14.33□□□□□ -0.12
TRIM39-204ENST00000396548 NLRP12P59046 1061 aa14.33□□□□□ -0.12
TRIM39-204ENST00000396548 PDCD2LQ9BRP1 358 aa14.33□□□□□ -0.12
TRIM39-204ENST00000396548 DCAF8L1A6NGE4 600 aa14.33□□□□□ -0.12
TRIM39-204ENST00000396548 OSBPP22059 807 aa14.33□□□□□ -0.12
TRIM39-204ENST00000396548 TXLNAP40222 546 aa14.33□□□□□ -0.12
TRIM39-204ENST00000396548 IRX3P78415 501 aaPredicted RBP14.33□□□□□ -0.12
TRIM39-204ENST00000396548 PABPC4Q13310 644 aaKnown RBP eCLIP14.33□□□□□ -0.12
TRIM39-204ENST00000396548 ANKRD23Q86SG2 305 aa14.33□□□□□ -0.12
TRIM39-204ENST00000396548 CUEDC2Q9H467 287 aa14.33□□□□□ -0.12
TRIM39-204ENST00000396548 BLOC1S4Q9NUP1 217 aa14.33□□□□□ -0.12
TRIM39-204ENST00000396548 KIAA1217Q5T5P2 1943 aa14.33□□□□□ -0.12
TRIM39-204ENST00000396548 BTBD19C9JJ37 291 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 ARP10275 920 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 SETQ01105 290 aaPredicted RBP14.32□□□□□ -0.12
TRIM39-204ENST00000396548 IQCB1Q15051 598 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 Q3C1V9 767 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 CEP57L1Q8IYX8 460 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 MOV10L1Q9BXT6 1211 aaKnown RBP14.32□□□□□ -0.12
TRIM39-204ENST00000396548 PPP2R5CQ13362 524 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 MORC3Q14149 939 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 RRAGBQ5VZM2 374 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 XRRA1Q6P2D8 792 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 OTOP1Q7RTM1 612 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 RMDN3Q96TC7 470 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 PTPN18Q99952 460 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 BPIFA3Q9BQP9 254 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 RAB34Q9BZG1 259 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 DNAJC25Q9H1X3 360 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 JADE2Q9NQC1 790 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 MAN1B1Q9UKM7 699 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 DHX15O43143 795 aaKnown RBP14.32□□□□□ -0.12
TRIM39-204ENST00000396548 CAVIN2O95810 425 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms