RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 C6orf50Q9HD87 102 aa22.83■■□□□ 1.25
SNCA-203ENST00000394986 GJB4Q9NTQ9 266 aa22.83■■□□□ 1.25
SNCA-203ENST00000394986 GNEQ9Y223 722 aaKnown RBP22.83■■□□□ 1.25
SNCA-203ENST00000394986 EIF3JO75822 258 aaKnown RBP22.82■■□□□ 1.24
SNCA-203ENST00000394986 CLK2P49760 499 aaKnown RBP22.82■■□□□ 1.24
SNCA-203ENST00000394986 MRPS9P82933 396 aaKnown RBP22.82■■□□□ 1.24
SNCA-203ENST00000394986 LRRC41Q15345 812 aa22.82■■□□□ 1.24
SNCA-203ENST00000394986 IQSEC1Q6DN90 963 aa22.82■■□□□ 1.24
SNCA-203ENST00000394986 ANKLE1Q8NAG6 615 aa22.82■■□□□ 1.24
SNCA-203ENST00000394986 COPS5Q92905 334 aa22.82■■□□□ 1.24
SNCA-203ENST00000394986 ANO3Q9BYT9 981 aa22.82■■□□□ 1.24
SNCA-203ENST00000394986 SH3GLB2Q9NR46 395 aa22.82■■□□□ 1.24
SNCA-203ENST00000394986 SH2B1Q9NRF2 756 aaPredicted RBP22.82■■□□□ 1.24
SNCA-203ENST00000394986 NLRP5P59047 1200 aa22.82■■□□□ 1.24
SNCA-203ENST00000394986 TLK2Q86UE8 772 aa22.82■■□□□ 1.24
SNCA-203ENST00000394986 SCFD2Q8WU76 684 aa22.82■■□□□ 1.24
SNCA-203ENST00000394986 RTEL1Q9NZ71 1219 aa22.82■■□□□ 1.24
SNCA-203ENST00000394986 KCNJ14Q9UNX9 436 aa22.82■■□□□ 1.24
SNCA-203ENST00000394986 DYNC1LI2O43237 492 aaPredicted RBP22.81■■□□□ 1.24
SNCA-203ENST00000394986 TXNP10599 105 aaKnown RBP22.81■■□□□ 1.24
SNCA-203ENST00000394986 FOSBP53539 338 aa22.81■■□□□ 1.24
SNCA-203ENST00000394986 LY6KQ17RY6 165 aa22.81■■□□□ 1.24
SNCA-203ENST00000394986 DUSP28Q4G0W2 176 aa22.81■■□□□ 1.24
SNCA-203ENST00000394986 PCNX4Q63HM2 1172 aa22.81■■□□□ 1.24
SNCA-203ENST00000394986 ARRDC4Q8NCT1 418 aa22.81■■□□□ 1.24
SNCA-203ENST00000394986 GLT8D2Q9H1C3 349 aa22.81■■□□□ 1.24
SNCA-203ENST00000394986 DNM1LO00429 736 aa22.8■■□□□ 1.24
SNCA-203ENST00000394986 C6orf222P0C671 652 aaPredicted RBP22.8■■□□□ 1.24
SNCA-203ENST00000394986 GNA11P29992 359 aa22.8■■□□□ 1.24
SNCA-203ENST00000394986 GJA9P57773 515 aa22.8■■□□□ 1.24
SNCA-203ENST00000394986 BEX3Q00994 111 aa22.8■■□□□ 1.24
SNCA-203ENST00000394986 TTLL4Q14679 1199 aa22.8■■□□□ 1.24
SNCA-203ENST00000394986 NPY5RQ15761 445 aa22.8■■□□□ 1.24
SNCA-203ENST00000394986 REXO1Q8N1G1 1221 aaKnown RBP22.8■■□□□ 1.24
SNCA-203ENST00000394986 TMX3Q96JJ7 454 aa22.8■■□□□ 1.24
SNCA-203ENST00000394986 ALG1Q9BT22 464 aa22.8■■□□□ 1.24
SNCA-203ENST00000394986 UPF3AQ9H1J1 476 aaKnown RBP22.8■■□□□ 1.24
SNCA-203ENST00000394986 MRVI1Q9Y6F6 885 aa22.8■■□□□ 1.24
SNCA-203ENST00000394986 MKI67P46013 3256 aaKnown RBP22.79■■□□□ 1.24
SNCA-203ENST00000394986 KBTBD13C9JR72 458 aa22.79■■□□□ 1.24
SNCA-203ENST00000394986 CTAGE5O15320 804 aa22.79■■□□□ 1.24
SNCA-203ENST00000394986 FOSP01100 380 aaPredicted RBP22.79■■□□□ 1.24
SNCA-203ENST00000394986 CAPN2P17655 700 aa22.79■■□□□ 1.24
SNCA-203ENST00000394986 AP3B2Q13367 1082 aa22.79■■□□□ 1.24
SNCA-203ENST00000394986 CCDC62Q6P9F0 684 aa22.79■■□□□ 1.24
SNCA-203ENST00000394986 NECAB2Q7Z6G3 386 aa22.79■■□□□ 1.24
SNCA-203ENST00000394986 RNF180Q86T96 592 aa22.79■■□□□ 1.24
SNCA-203ENST00000394986 SORBS3O60504 671 aa22.78■■□□□ 1.24
SNCA-203ENST00000394986 COL6A1P12109 1028 aa22.78■■□□□ 1.24
SNCA-203ENST00000394986 KLHDC9Q8NEP7 349 aa22.78■■□□□ 1.24
SNCA-203ENST00000394986 INPP4AQ96PE3 977 aaPredicted RBP22.78■■□□□ 1.24
SNCA-203ENST00000394986 AP5M1Q9H0R1 490 aa22.78■■□□□ 1.24
SNCA-203ENST00000394986 C11orf49Q9H6J7 331 aa22.78■■□□□ 1.24
SNCA-203ENST00000394986 EHMT1Q9H9B1 1298 aa22.78■■□□□ 1.24
SNCA-203ENST00000394986 PCDHA4Q9UN74 947 aa22.78■■□□□ 1.24
SNCA-203ENST00000394986 SEMA3FQ13275 785 aa22.77■■□□□ 1.24
SNCA-203ENST00000394986 TEX2Q8IWB9 1127 aa22.77■■□□□ 1.24
SNCA-203ENST00000394986 OR6J1Q8NGC5 347 aa22.77■■□□□ 1.24
SNCA-203ENST00000394986 BICD2Q8TD16 824 aa22.77■■□□□ 1.24
SNCA-203ENST00000394986 WASF1Q92558 559 aa22.77■■□□□ 1.24
SNCA-203ENST00000394986 FERMT2Q96AC1 680 aa22.77■■□□□ 1.24
SNCA-203ENST00000394986 PHF20Q9BVI0 1012 aa22.77■■□□□ 1.24
SNCA-203ENST00000394986 SPC25Q9HBM1 224 aa22.77■■□□□ 1.24
SNCA-203ENST00000394986 DDX41Q9UJV9 622 aaKnown RBP22.77■■□□□ 1.24
SNCA-203ENST00000394986 SREBF1P36956 1147 aa22.76■■□□□ 1.23
SNCA-203ENST00000394986 MLLT1Q03111 559 aaPredicted RBP22.76■■□□□ 1.23
SNCA-203ENST00000394986 KCNA10Q16322 511 aa22.76■■□□□ 1.23
SNCA-203ENST00000394986 CCSAPQ6IQ19 270 aaPredicted RBP22.76■■□□□ 1.23
SNCA-203ENST00000394986 XRRA1Q6P2D8 792 aa22.76■■□□□ 1.23
SNCA-203ENST00000394986 LLPHQ9BRT6 129 aaKnown RBP22.76■■□□□ 1.23
SNCA-203ENST00000394986 SENP6Q9GZR1 1112 aaPredicted RBP22.76■■□□□ 1.23
SNCA-203ENST00000394986 STAM2O75886 525 aa22.75■■□□□ 1.23
SNCA-203ENST00000394986 ITGB5P18084 799 aa22.75■■□□□ 1.23
SNCA-203ENST00000394986 CST5P28325 142 aaPredicted RBP22.75■■□□□ 1.23
SNCA-203ENST00000394986 SP2Q02086 613 aa22.75■■□□□ 1.23
SNCA-203ENST00000394986 FSCN1Q16658 493 aaKnown RBP22.75■■□□□ 1.23
SNCA-203ENST00000394986 GNASQ5JWF2 1037 aa22.75■■□□□ 1.23
SNCA-203ENST00000394986 BLIDQ8IZY5 108 aa22.75■■□□□ 1.23
SNCA-203ENST00000394986 IL27Q8NEV9 243 aa22.75■■□□□ 1.23
SNCA-203ENST00000394986 Q9Y3F1 56 aa22.75■■□□□ 1.23
SNCA-203ENST00000394986 NKRFO15226 690 aaKnown RBP eCLIP22.74■■□□□ 1.23
SNCA-203ENST00000394986 XBP1P17861 261 aa22.74■■□□□ 1.23
SNCA-203ENST00000394986 UBA1P22314 1058 aaKnown RBP22.74■■□□□ 1.23
SNCA-203ENST00000394986 MCM2P49736 904 aa22.74■■□□□ 1.23
SNCA-203ENST00000394986 ARHGAP4P98171 946 aa22.74■■□□□ 1.23
SNCA-203ENST00000394986 ARHGAP1Q07960 439 aa22.74■■□□□ 1.23
SNCA-203ENST00000394986 GNPTABQ3T906 1256 aa22.74■■□□□ 1.23
SNCA-203ENST00000394986 DAGLBQ8NCG7 672 aa22.74■■□□□ 1.23
SNCA-203ENST00000394986 CYP2W1Q8TAV3 490 aa22.74■■□□□ 1.23
SNCA-203ENST00000394986 OXER1Q8TDS5 423 aa22.74■■□□□ 1.23
SNCA-203ENST00000394986 BCAS3Q9H6U6 928 aa22.74■■□□□ 1.23
SNCA-203ENST00000394986 PHF24Q9UPV7 400 aa22.74■■□□□ 1.23
SNCA-203ENST00000394986 UBIAD1Q9Y5Z9 338 aa22.74■■□□□ 1.23
SNCA-203ENST00000394986 M0R2N6 131 aa22.74■■□□□ 1.23
SNCA-203ENST00000394986 GH1P01241 217 aa22.74■■□□□ 1.23
SNCA-203ENST00000394986 ASGR1P07306 291 aa22.74■■□□□ 1.23
SNCA-203ENST00000394986 ACLYP53396 1101 aa22.74■■□□□ 1.23
SNCA-203ENST00000394986 ATN1P54259 1190 aaPredicted RBP22.74■■□□□ 1.23
SNCA-203ENST00000394986 NKX3-2P78367 333 aa22.74■■□□□ 1.23
SNCA-203ENST00000394986 A0A1W2PQ45 241 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms