RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 INTUQ9ULD6 942 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 MAP3K15Q6ZN16 1313 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 PNPLA7Q6ZV29 1317 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 OPLAHO14841 1288 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 CAMTA2O94983 1202 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 CALRP27797 417 aaKnown RBP9.72□□□□□ -0.85
RTN4-206ENST00000394611 KIF11P52732 1056 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 SPATA4Q8NEY3 305 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 NBPF3Q9H094 633 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 A0A087X0B3 334 aa9.71□□□□□ -0.85
RTN4-206ENST00000394611 KRIT1O00522 736 aa9.71□□□□□ -0.85
RTN4-206ENST00000394611 GRIPAP1Q4V328 841 aa9.71□□□□□ -0.85
RTN4-206ENST00000394611 ZNF444Q8N0Y2 327 aaPredicted RBP9.71□□□□□ -0.85
RTN4-206ENST00000394611 ANKS4BQ8N8V4 417 aa9.71□□□□□ -0.85
RTN4-206ENST00000394611 LSM14BQ9BX40 385 aaKnown RBP9.71□□□□□ -0.85
RTN4-206ENST00000394611 KLC4Q9NSK0 619 aa9.71□□□□□ -0.85
RTN4-206ENST00000394611 SEC63Q9UGP8 760 aaKnown RBP9.71□□□□□ -0.85
RTN4-206ENST00000394611 TUBE1Q9UJT0 475 aa9.71□□□□□ -0.85
RTN4-206ENST00000394611 PLTPP55058 493 aa9.71□□□□□ -0.85
RTN4-206ENST00000394611 MAGOHP61326 146 aaKnown RBP9.71□□□□□ -0.85
RTN4-206ENST00000394611 DPYDQ12882 1025 aa9.71□□□□□ -0.85
RTN4-206ENST00000394611 MAGOHBQ96A72 148 aaKnown RBP9.71□□□□□ -0.85
RTN4-206ENST00000394611 FBXO2Q9UK22 296 aaPredicted RBP9.71□□□□□ -0.85
RTN4-206ENST00000394611 ZBTB12Q9Y330 459 aaPredicted RBP9.71□□□□□ -0.85
RTN4-206ENST00000394611 A0A1W2PRG0 241 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 CCDC160A6NGH7 325 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 TNNC1P63316 161 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 ARHGAP44Q17R89 818 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 GKAP1Q5VSY0 366 aaPredicted RBP9.71□□□□□ -0.86
RTN4-206ENST00000394611 RFX8Q6ZV50 586 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 SPATA5Q8NB90 893 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 TSEN2Q8NCE0 465 aaKnown RBP9.71□□□□□ -0.86
RTN4-206ENST00000394611 TRIM58Q8NG06 486 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 FBF1Q8TES7 1133 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 PKD2L1Q9P0L9 805 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 L3MBTL1Q9Y468 752 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 CDHR2Q9BYE9 1310 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 A0A1B0GTH6 734 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 GOLGA8KD6RF30 607 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 EIF3HO15372 352 aaKnown RBP eCLIP9.71□□□□□ -0.86
RTN4-206ENST00000394611 PALMO75781 387 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 FAM153BP0C7A2 387 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 ZNF211Q13398 564 aaPredicted RBP9.71□□□□□ -0.86
RTN4-206ENST00000394611 MTM1Q13496 603 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 RPS6KA1Q15418 735 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 TRIP13Q15645 432 aaPredicted RBP9.71□□□□□ -0.86
RTN4-206ENST00000394611 FAM153CQ494X1 144 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 CCT8L2Q96SF2 557 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 CNNM2Q9H8M5 875 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 FAM153AQ9UHL3 310 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 NARFQ9UHQ1 456 aa9.71□□□□□ -0.86
RTN4-206ENST00000394611 ARFGEF2Q9Y6D5 1785 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 C4AP0C0L4 1744 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 SH3TC1Q8TE82 1336 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 TSPY3P0CV98 308 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 TSPY8P0CW00 308 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 ERCC5P28715 1186 aaPredicted RBP9.7□□□□□ -0.86
RTN4-206ENST00000394611 SLC1A4P43007 532 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 TOB1P50616 345 aaPredicted RBP9.7□□□□□ -0.86
RTN4-206ENST00000394611 MB21D1Q8N884 522 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.7□□□□□ -0.86
RTN4-206ENST00000394611 G3BP2Q9UN86 482 aaKnown RBP9.7□□□□□ -0.86
RTN4-206ENST00000394611 LRRC53A6NM62 1247 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 SYF2O95926 243 aaKnown RBP9.7□□□□□ -0.86
RTN4-206ENST00000394611 LSP1P33241 339 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 EPHB4P54760 987 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 R3HDM1Q15032 1099 aaKnown RBP9.7□□□□□ -0.86
RTN4-206ENST00000394611 HP1BP3Q5SSJ5 553 aaPredicted RBP9.7□□□□□ -0.86
RTN4-206ENST00000394611 GIGYF2Q6Y7W6 1299 aaKnown RBP9.7□□□□□ -0.86
RTN4-206ENST00000394611 CCNI2Q6ZMN8 369 aaPredicted RBP9.7□□□□□ -0.86
RTN4-206ENST00000394611 CABP7Q86V35 215 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 CCDC63Q8NA47 563 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 OSBPL9Q96SU4 736 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 BPIFA3Q9BQP9 254 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 PCDHA13Q9Y5I0 950 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 SRPRBQ9Y5M8 271 aaKnown RBP9.7□□□□□ -0.86
RTN4-206ENST00000394611 USP42Q9H9J4 1324 aaKnown RBP9.7□□□□□ -0.86
RTN4-206ENST00000394611 PTPAQ15257 358 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 SLC9C1Q4G0N8 1177 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 ATG9AQ7Z3C6 839 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 PEX26Q7Z412 305 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 NLRP14Q86W24 1093 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 ARFGAP2Q8N6H7 521 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 LY9Q9HBG7 655 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 MYO1AQ9UBC5 1043 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 PCDHB13Q9Y5F0 798 aa9.7□□□□□ -0.86
RTN4-206ENST00000394611 NUP98P52948 1817 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 CLGNO14967 610 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 ELF1P32519 619 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 PMS1P54277 932 aaKnown RBP9.69□□□□□ -0.86
RTN4-206ENST00000394611 ZNF449Q6P9G9 518 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 RASGRP2Q7LDG7 609 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 CCDC50Q8IVM0 306 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 FAM114A1Q8IWE2 563 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 CRACR2BQ8N4Y2 399 aaPredicted RBP9.69□□□□□ -0.86
RTN4-206ENST00000394611 ZNF473Q8WTR7 871 aaKnown RBP9.69□□□□□ -0.86
RTN4-206ENST00000394611 U2AF1L4Q8WU68 220 aaKnown RBP9.69□□□□□ -0.86
RTN4-206ENST00000394611 HSD3B7Q9H2F3 369 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 GPCPD1Q9NPB8 672 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 hCG_2014768A0A024R1R8 64 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms