RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 EHHADHQ08426 723 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 ORC2Q13416 577 aaPredicted RBP17.28■□□□□ 0.36
PTBP1-204ENST00000394601 KCTD19Q17RG1 926 aaPredicted RBP17.28■□□□□ 0.36
PTBP1-204ENST00000394601 EEF2KMTQ96G04 330 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 CRAMP1Q96RY5 1269 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 KCNG1Q9UIX4 513 aa17.28■□□□□ 0.36
PTBP1-204ENST00000394601 EPN1Q9Y6I3 576 aaPredicted RBP17.28■□□□□ 0.36
PTBP1-204ENST00000394601 FRMPD2Q68DX3 1309 aaPredicted RBP17.27■□□□□ 0.36
PTBP1-204ENST00000394601 B4DLN1 442 aa17.27■□□□□ 0.36
PTBP1-204ENST00000394601 MYO1FO00160 1098 aa17.27■□□□□ 0.36
PTBP1-204ENST00000394601 ATP8B1O43520 1251 aa17.27■□□□□ 0.36
PTBP1-204ENST00000394601 CCNE1P24864 410 aa17.27■□□□□ 0.36
PTBP1-204ENST00000394601 FXR2P51116 673 aaKnown RBP eCLIP17.27■□□□□ 0.36
PTBP1-204ENST00000394601 BRD3Q15059 726 aa17.27■□□□□ 0.36
PTBP1-204ENST00000394601 P2RX5Q93086 422 aa17.27■□□□□ 0.36
PTBP1-204ENST00000394601 NUDT12Q9BQG2 462 aa17.27■□□□□ 0.36
PTBP1-204ENST00000394601 PSEN1P49768 467 aa17.27■□□□□ 0.35
PTBP1-204ENST00000394601 SETQ01105 290 aaPredicted RBP17.27■□□□□ 0.35
PTBP1-204ENST00000394601 ZNF662Q6ZS27 426 aa17.27■□□□□ 0.35
PTBP1-204ENST00000394601 MSANTD4Q8NCY6 345 aa17.27■□□□□ 0.35
PTBP1-204ENST00000394601 VAT1LQ9HCJ6 419 aa17.27■□□□□ 0.35
PTBP1-204ENST00000394601 RAB21Q9UL25 225 aa17.27■□□□□ 0.35
PTBP1-204ENST00000394601 CEP83Q9Y592 693 aa17.27■□□□□ 0.35
PTBP1-204ENST00000394601 CTAGE9A4FU28 777 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 KCTD16Q68DU8 428 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 OR8K1Q8NGG5 319 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 COA7Q96BR5 231 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 TUBGCP2Q9BSJ2 902 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 MYO1AQ9UBC5 1043 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 SPATA31A6Q5VVP1 1343 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 RCCD1A6NED2 376 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 PSMA7O14818 248 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 ACTN3Q08043 901 aaPredicted RBP17.26■□□□□ 0.35
PTBP1-204ENST00000394601 ECM1Q16610 540 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 CENPPQ6IPU0 288 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 REXO1Q8N1G1 1221 aaKnown RBP17.26■□□□□ 0.35
PTBP1-204ENST00000394601 TBC1D22AQ8WUA7 517 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 FAM169AQ9Y6X4 670 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 BRWD3Q6RI45 1802 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 MYMKA6NI61 221 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 TDP2O95551 362 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 MAP9Q49MG5 647 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 TRIM47Q96LD4 638 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 CD248Q9HCU0 757 aa17.26■□□□□ 0.35
PTBP1-204ENST00000394601 SHMT1P34896 483 aa17.25■□□□□ 0.35
PTBP1-204ENST00000394601 PDE4DQ08499 809 aa17.25■□□□□ 0.35
PTBP1-204ENST00000394601 CNNM4Q6P4Q7 775 aa17.25■□□□□ 0.35
PTBP1-204ENST00000394601 GBP6Q6ZN66 633 aa17.25■□□□□ 0.35
PTBP1-204ENST00000394601 KCNK18Q7Z418 384 aa17.25■□□□□ 0.35
PTBP1-204ENST00000394601 CNPY4Q8N129 248 aa17.25■□□□□ 0.35
PTBP1-204ENST00000394601 NOC3LQ8WTT2 800 aaKnown RBP17.25■□□□□ 0.35
PTBP1-204ENST00000394601 MTMR8Q96EF0 704 aa17.25■□□□□ 0.35
PTBP1-204ENST00000394601 ACBD3Q9H3P7 528 aa17.25■□□□□ 0.35
PTBP1-204ENST00000394601 JMJD4Q9H9V9 463 aa17.25■□□□□ 0.35
PTBP1-204ENST00000394601 L1RE1Q9UN81 338 aa17.25■□□□□ 0.35
PTBP1-204ENST00000394601 MAP2K7O14733 419 aa17.25■□□□□ 0.35
PTBP1-204ENST00000394601 SLURP2P0DP57 97 aa17.25■□□□□ 0.35
PTBP1-204ENST00000394601 HNRNPH1P31943 449 aaKnown RBP17.25■□□□□ 0.35
PTBP1-204ENST00000394601 INPP5BP32019 993 aa17.25■□□□□ 0.35
PTBP1-204ENST00000394601 RDXP35241 583 aaKnown RBP17.25■□□□□ 0.35
PTBP1-204ENST00000394601 DNM2P50570 870 aa17.25■□□□□ 0.35
PTBP1-204ENST00000394601 LRRC47Q8N1G4 583 aaKnown RBP17.25■□□□□ 0.35
PTBP1-204ENST00000394601 CSGALNACT2Q8N6G5 542 aa17.25■□□□□ 0.35
PTBP1-204ENST00000394601 hCG_1984214I3L0E3 225 aa17.24■□□□□ 0.35
PTBP1-204ENST00000394601 ZNF713Q8N859 430 aaPredicted RBP17.24■□□□□ 0.35
PTBP1-204ENST00000394601 HAS1Q92839 578 aa17.24■□□□□ 0.35
PTBP1-204ENST00000394601 CNOT6LQ96LI5 555 aaKnown RBP17.24■□□□□ 0.35
PTBP1-204ENST00000394601 MXD3Q9BW11 206 aa17.24■□□□□ 0.35
PTBP1-204ENST00000394601 PSMD14O00487 310 aa17.24■□□□□ 0.35
PTBP1-204ENST00000394601 PPFIA4O75335 1185 aa17.24■□□□□ 0.35
PTBP1-204ENST00000394601 GTF2IP78347 998 aa17.24■□□□□ 0.35
PTBP1-204ENST00000394601 ERGIC2Q96RQ1 377 aa17.24■□□□□ 0.35
PTBP1-204ENST00000394601 EXOC1Q9NV70 894 aa17.24■□□□□ 0.35
PTBP1-204ENST00000394601 GGCXP38435 758 aa17.24■□□□□ 0.35
PTBP1-204ENST00000394601 TMEM119Q4V9L6 283 aa17.24■□□□□ 0.35
PTBP1-204ENST00000394601 TRAPPC11Q7Z392 1133 aa17.24■□□□□ 0.35
PTBP1-204ENST00000394601 SP8Q8IXZ3 490 aa17.24■□□□□ 0.35
PTBP1-204ENST00000394601 EFCAB13Q8IY85 973 aa17.24■□□□□ 0.35
PTBP1-204ENST00000394601 PROM2Q8N271 834 aa17.24■□□□□ 0.35
PTBP1-204ENST00000394601 SEC63Q9UGP8 760 aaKnown RBP17.24■□□□□ 0.35
PTBP1-204ENST00000394601 LUC7L2Q9Y383 392 aaKnown RBP17.24■□□□□ 0.35
PTBP1-204ENST00000394601 ZNF263O14978 683 aa17.23■□□□□ 0.35
PTBP1-204ENST00000394601 ZNF543Q08ER8 600 aa17.23■□□□□ 0.35
PTBP1-204ENST00000394601 TUBB2AQ13885 445 aa17.23■□□□□ 0.35
PTBP1-204ENST00000394601 ASPRV1Q53RT3 343 aa17.23■□□□□ 0.35
PTBP1-204ENST00000394601 HNRNPLLQ8WVV9 542 aaKnown RBP17.23■□□□□ 0.35
PTBP1-204ENST00000394601 PURBQ96QR8 312 aaKnown RBP17.23■□□□□ 0.35
PTBP1-204ENST00000394601 NAPGQ99747 312 aaPredicted RBP17.23■□□□□ 0.35
PTBP1-204ENST00000394601 TUBB2BQ9BVA1 445 aa17.23■□□□□ 0.35
PTBP1-204ENST00000394601 CLGNO14967 610 aa17.23■□□□□ 0.35
PTBP1-204ENST00000394601 TXKP42681 527 aa17.23■□□□□ 0.35
PTBP1-204ENST00000394601 ADGRF4Q8IZF3 695 aa17.23■□□□□ 0.35
PTBP1-204ENST00000394601 CEP112Q8N8E3 955 aa17.23■□□□□ 0.35
PTBP1-204ENST00000394601 GLIS3Q8NEA6 775 aa17.23■□□□□ 0.35
PTBP1-204ENST00000394601 SIK3Q9Y2K2 1263 aa17.23■□□□□ 0.35
PTBP1-204ENST00000394601 POTEMA6NI47 508 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 UBAP1LF5GYI3 381 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 EPHB6O15197 1021 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 GNGT1P63211 74 aa17.22■□□□□ 0.35
PTBP1-204ENST00000394601 FIGNQ5HY92 759 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms