RNA–Protein interactions for RNA: ENST00000394011.7

RALGPS1-206, Transcript of Ral GEF with PH domain and SH3 binding motif 1, humanhuman

TSL 1 (best) BASIC

Gene RALGPS1, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGPS1-206ENST00000394011 NFRKBQ6P4R8 1299 aa22.74■■□□□ 1.23
RALGPS1-206ENST00000394011 OTOP2Q7RTS6 562 aa22.74■■□□□ 1.23
RALGPS1-206ENST00000394011 CTAGE1Q96RT6 745 aa22.74■■□□□ 1.23
RALGPS1-206ENST00000394011 AMNQ9BXJ7 453 aa22.74■■□□□ 1.23
RALGPS1-206ENST00000394011 COL25A1Q9BXS0 654 aaPredicted RBP22.74■■□□□ 1.23
RALGPS1-206ENST00000394011 RIOX1Q9H6W3 641 aa22.74■■□□□ 1.23
RALGPS1-206ENST00000394011 PXMP2Q9NR77 195 aa22.74■■□□□ 1.23
RALGPS1-206ENST00000394011 TRIP12Q14669 1992 aaPredicted RBP22.73■■□□□ 1.23
RALGPS1-206ENST00000394011 ZBTB5O15062 677 aa22.73■■□□□ 1.23
RALGPS1-206ENST00000394011 CYTH3O43739 400 aa22.73■■□□□ 1.23
RALGPS1-206ENST00000394011 DHX16O60231 1041 aaKnown RBP22.73■■□□□ 1.23
RALGPS1-206ENST00000394011 SUPT20HL2P0C7V6 817 aa22.73■■□□□ 1.23
RALGPS1-206ENST00000394011 GRM4Q14833 912 aa22.73■■□□□ 1.23
RALGPS1-206ENST00000394011 SEPT14Q6ZU15 432 aa22.73■■□□□ 1.23
RALGPS1-206ENST00000394011 RASEFQ8IZ41 740 aa22.73■■□□□ 1.23
RALGPS1-206ENST00000394011 IGDCC4Q8TDY8 1250 aa22.73■■□□□ 1.23
RALGPS1-206ENST00000394011 AFG1LQ8WV93 481 aa22.73■■□□□ 1.23
RALGPS1-206ENST00000394011 KAT2BQ92831 832 aa22.73■■□□□ 1.23
RALGPS1-206ENST00000394011 NEK1Q96PY6 1258 aa22.73■■□□□ 1.23
RALGPS1-206ENST00000394011 GPHNQ9NQX3 736 aaPredicted RBP22.73■■□□□ 1.23
RALGPS1-206ENST00000394011 DDX41Q9UJV9 622 aaKnown RBP22.73■■□□□ 1.23
RALGPS1-206ENST00000394011 TET1Q8NFU7 2136 aa22.72■■□□□ 1.23
RALGPS1-206ENST00000394011 RGS20O76081 388 aa22.72■■□□□ 1.23
RALGPS1-206ENST00000394011 MMP3P08254 477 aa22.72■■□□□ 1.23
RALGPS1-206ENST00000394011 EIF2AK2P19525 551 aaKnown RBP22.72■■□□□ 1.23
RALGPS1-206ENST00000394011 PTPN11Q06124 597 aaPredicted RBP22.72■■□□□ 1.23
RALGPS1-206ENST00000394011 TROAPQ12815 778 aa22.72■■□□□ 1.23
RALGPS1-206ENST00000394011 KRT32Q14532 448 aa22.72■■□□□ 1.23
RALGPS1-206ENST00000394011 STXBP2Q15833 593 aa22.72■■□□□ 1.23
RALGPS1-206ENST00000394011 MTA3Q9BTC8 594 aa22.72■■□□□ 1.23
RALGPS1-206ENST00000394011 YBX2Q9Y2T7 364 aaKnown RBP22.72■■□□□ 1.23
RALGPS1-206ENST00000394011 CHD7Q9P2D1 2997 aa22.72■■□□□ 1.23
RALGPS1-206ENST00000394011 CFBP00751 764 aa22.71■■□□□ 1.23
RALGPS1-206ENST00000394011 NR3C2P08235 984 aa22.71■■□□□ 1.23
RALGPS1-206ENST00000394011 TSGA10IPQ3SY00 556 aa22.71■■□□□ 1.23
RALGPS1-206ENST00000394011 BRDTQ58F21 947 aaPredicted RBP22.71■■□□□ 1.23
RALGPS1-206ENST00000394011 ARHGEF16Q5VV41 709 aa22.71■■□□□ 1.23
RALGPS1-206ENST00000394011 USP38Q8NB14 1042 aa22.71■■□□□ 1.23
RALGPS1-206ENST00000394011 TMEM87BQ96K49 555 aa22.71■■□□□ 1.23
RALGPS1-206ENST00000394011 EIF3JO75822 258 aaKnown RBP22.7■■□□□ 1.22
RALGPS1-206ENST00000394011 GH1P01241 217 aa22.7■■□□□ 1.22
RALGPS1-206ENST00000394011 HSPA4P34932 840 aa22.7■■□□□ 1.22
RALGPS1-206ENST00000394011 COL9A3Q14050 684 aaPredicted RBP22.7■■□□□ 1.22
RALGPS1-206ENST00000394011 FAM47CQ5HY64 1035 aa22.7■■□□□ 1.22
RALGPS1-206ENST00000394011 NFXL1Q6ZNB6 911 aa22.7■■□□□ 1.22
RALGPS1-206ENST00000394011 CATIPQ7Z7H3 387 aa22.7■■□□□ 1.22
RALGPS1-206ENST00000394011 SESTD1Q86VW0 696 aa22.7■■□□□ 1.22
RALGPS1-206ENST00000394011 RPUSD2Q8IZ73 545 aaKnown RBP22.7■■□□□ 1.22
RALGPS1-206ENST00000394011 EMID1Q96A84 441 aaPredicted RBP22.7■■□□□ 1.22
RALGPS1-206ENST00000394011 PIGSQ96S52 555 aa22.7■■□□□ 1.22
RALGPS1-206ENST00000394011 PDCD2LQ9BRP1 358 aa22.7■■□□□ 1.22
RALGPS1-206ENST00000394011 PTPRSQ13332 1948 aa22.7■■□□□ 1.22
RALGPS1-206ENST00000394011 ADCK5Q3MIX3 580 aa22.69■■□□□ 1.22
RALGPS1-206ENST00000394011 TMTC2Q8N394 836 aa22.69■■□□□ 1.22
RALGPS1-206ENST00000394011 IL31RAQ8NI17 732 aa22.69■■□□□ 1.22
RALGPS1-206ENST00000394011 LRRC2Q9BYS8 371 aa22.69■■□□□ 1.22
RALGPS1-206ENST00000394011 LY9Q9HBG7 655 aa22.69■■□□□ 1.22
RALGPS1-206ENST00000394011 MAP3K20Q9NYL2 800 aaKnown RBP22.69■■□□□ 1.22
RALGPS1-206ENST00000394011 PCDHA1Q9Y5I3 950 aa22.69■■□□□ 1.22
RALGPS1-206ENST00000394011 MYO9BQ13459 2157 aa22.68■■□□□ 1.22
RALGPS1-206ENST00000394011 PITPNM1O00562 1244 aa22.68■■□□□ 1.22
RALGPS1-206ENST00000394011 SH2B2O14492 632 aaPredicted RBP22.68■■□□□ 1.22
RALGPS1-206ENST00000394011 IQCF3P0C7M6 154 aa22.68■■□□□ 1.22
RALGPS1-206ENST00000394011 HOXA13P31271 388 aaPredicted RBP22.68■■□□□ 1.22
RALGPS1-206ENST00000394011 KCNB2Q92953 911 aa22.68■■□□□ 1.22
RALGPS1-206ENST00000394011 MTIF3Q9H2K0 278 aaKnown RBP22.68■■□□□ 1.22
RALGPS1-206ENST00000394011 NKX2-4Q9H2Z4 354 aa22.68■■□□□ 1.22
RALGPS1-206ENST00000394011 CCDC69A6NI79 296 aa22.67■■□□□ 1.22
RALGPS1-206ENST00000394011 PFKMP08237 780 aa22.67■■□□□ 1.22
RALGPS1-206ENST00000394011 HOXD8P13378 290 aaPredicted RBP22.67■■□□□ 1.22
RALGPS1-206ENST00000394011 RABGGTBP53611 331 aa22.67■■□□□ 1.22
RALGPS1-206ENST00000394011 ADGRE1Q14246 886 aa22.67■■□□□ 1.22
RALGPS1-206ENST00000394011 GPNMBQ14956 572 aa22.67■■□□□ 1.22
RALGPS1-206ENST00000394011 PGM5Q15124 567 aa22.67■■□□□ 1.22
RALGPS1-206ENST00000394011 RAB30Q15771 203 aa22.67■■□□□ 1.22
RALGPS1-206ENST00000394011 GDF6Q6KF10 455 aaPredicted RBP22.67■■□□□ 1.22
RALGPS1-206ENST00000394011 DHX32Q7L7V1 743 aaKnown RBP22.67■■□□□ 1.22
RALGPS1-206ENST00000394011 VSIG10LQ86VR7 867 aa22.67■■□□□ 1.22
RALGPS1-206ENST00000394011 HOMER1Q86YM7 354 aa22.67■■□□□ 1.22
RALGPS1-206ENST00000394011 SAMD3Q8N6K7 520 aa22.67■■□□□ 1.22
RALGPS1-206ENST00000394011 PRDM12Q9H4Q4 367 aa22.67■■□□□ 1.22
RALGPS1-206ENST00000394011 SNX14Q9Y5W7 946 aa22.67■■□□□ 1.22
RALGPS1-206ENST00000394011 HAS3O00219 553 aa22.66■■□□□ 1.22
RALGPS1-206ENST00000394011 EPB41L2O43491 1005 aaKnown RBP22.66■■□□□ 1.22
RALGPS1-206ENST00000394011 HMGB1P09429 215 aaKnown RBP22.66■■□□□ 1.22
RALGPS1-206ENST00000394011 MYOGP15173 224 aa22.66■■□□□ 1.22
RALGPS1-206ENST00000394011 LIFRP42702 1097 aa22.66■■□□□ 1.22
RALGPS1-206ENST00000394011 DEFB128Q7Z7B8 93 aa22.66■■□□□ 1.22
RALGPS1-206ENST00000394011 ZNF654Q8IZM8 581 aa22.66■■□□□ 1.22
RALGPS1-206ENST00000394011 DHX38Q92620 1227 aaKnown RBP22.66■■□□□ 1.22
RALGPS1-206ENST00000394011 MSRAQ9UJ68 235 aa22.66■■□□□ 1.22
RALGPS1-206ENST00000394011 CASTP20810 708 aaKnown RBP22.65■■□□□ 1.22
RALGPS1-206ENST00000394011 RFC2P35250 354 aa22.65■■□□□ 1.22
RALGPS1-206ENST00000394011 SP2Q02086 613 aa22.65■■□□□ 1.22
RALGPS1-206ENST00000394011 PPTC7Q8NI37 304 aa22.65■■□□□ 1.22
RALGPS1-206ENST00000394011 TCEANC2Q96MN5 208 aa22.65■■□□□ 1.22
RALGPS1-206ENST00000394011 JAKMIP1Q96N16 626 aaKnown RBP22.65■■□□□ 1.22
RALGPS1-206ENST00000394011 USP26Q9BXU7 913 aa22.65■■□□□ 1.22
RALGPS1-206ENST00000394011 MRVI1Q9Y6F6 885 aa22.65■■□□□ 1.22
RALGPS1-206ENST00000394011 SLC4A7Q9Y6M7 1214 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms