RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 USP46P62068 366 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 RASA3Q14644 834 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 POSTNQ15063 836 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 FAM47EQ6ZV65 393 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 FAM133AQ8N9E0 248 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 RETREG2Q8NC44 543 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 GSDMBQ8TAX9 411 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 TRIM31Q9BZY9 425 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 ZNF180Q9UJW8 692 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 GOLGA8BA8MQT2 603 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 G3V3G9 751 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 ZPR1O75312 459 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 UBTFL6P0CB48 400 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-201ENST00000393077 PHBP35232 272 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 ADARP55265 1226 aaKnown RBP8.32□□□□□ -1.08
VTI1A-201ENST00000393077 DCAF8Q5TAQ9 597 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 CROCCP2Q86T23 111 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 PAF1Q8N7H5 531 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 ANKRD42Q8N9B4 389 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 PRCCQ92733 491 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-201ENST00000393077 TRMT112Q9UI30 125 aaKnown RBP8.32□□□□□ -1.08
VTI1A-201ENST00000393077 SERPINA10Q9UK55 444 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 ITM2BQ9Y287 266 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 ATP8A1Q9Y2Q0 1164 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 ADCY3O60266 1144 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 CIB2O75838 187 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 LINGO3P0C6S8 592 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 RIPK1Q13546 671 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 ARHGAP24Q8N264 748 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 ENOX1Q8TC92 643 aaKnown RBP8.31□□□□□ -1.08
VTI1A-201ENST00000393077 ARHGEF1Q92888 912 aaKnown RBP8.31□□□□□ -1.08
VTI1A-201ENST00000393077 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.31□□□□□ -1.08
VTI1A-201ENST00000393077 SPZ1Q9BXG8 430 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 IFIH1Q9BYX4 1025 aaKnown RBP8.31□□□□□ -1.08
VTI1A-201ENST00000393077 OSBPL7Q9BZF2 842 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 FAM192AQ9GZU8 254 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 NCOA5Q9HCD5 579 aaKnown RBP8.31□□□□□ -1.08
VTI1A-201ENST00000393077 AXIN2Q9Y2T1 843 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 CLIC4Q9Y696 253 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 DEPDC5O75140 1603 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 LAMC1P11047 1609 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 REREQ9P2R6 1566 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 CCDC169A6NNP5 214 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 ZNF185O15231 689 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 ZNF24P17028 368 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 ALDH5A1P51649 535 aaPredicted RBP8.31□□□□□ -1.08
VTI1A-201ENST00000393077 PDE1BQ01064 536 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 TTMPQ5BVD1 217 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 LMBR1LQ6UX01 489 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 PPP1R21Q6ZMI0 780 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 SPATA4Q8NEY3 305 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 USP33Q8TEY7 942 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 RAPGEF5Q92565 580 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 C8orf37Q96NL8 207 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 NOX5Q96PH1 765 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 BTBD7Q9P203 1132 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 THEGQ9P2T0 379 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 DKK3Q9UBP4 350 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 TSKSQ9UJT2 592 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 PRELID1Q9Y255 219 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 KIAA0232Q92628 1395 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 SPDYE5A6NIY4 337 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 POLR2DO15514 142 aaKnown RBP8.31□□□□□ -1.08
VTI1A-201ENST00000393077 A1BGP04217 495 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 ZCCHC18P0CG32 403 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 EPB41P11171 864 aaKnown RBP8.31□□□□□ -1.08
VTI1A-201ENST00000393077 EIF4BP23588 611 aaKnown RBP8.31□□□□□ -1.08
VTI1A-201ENST00000393077 STX2P32856 288 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 MAGEA1P43355 309 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 MAGEA10P43363 369 aaPredicted RBP8.31□□□□□ -1.08
VTI1A-201ENST00000393077 DENND2CQ68D51 928 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 THOC7Q6I9Y2 204 aaKnown RBP8.31□□□□□ -1.08
VTI1A-201ENST00000393077 IRGCQ6NXR0 463 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 ZNF554Q86TJ5 538 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 LINC00301Q8NCQ3 95 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 PALMDQ9NP74 551 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 GRIN2DO15399 1336 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 LMTK3Q96Q04 1460 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 KIF24Q5T7B8 1368 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 ANO9A1A5B4 782 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 PRAMEF22A3QJZ6 481 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 IQCA1LA6NCM1 817 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 STK10O94804 968 aaKnown RBP8.31□□□□□ -1.08
VTI1A-201ENST00000393077 EPS15P42566 896 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 MTTPP55157 894 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 IGBP1P78318 339 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 MYBPC3Q14896 1274 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 METTL24Q5JXM2 366 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 POTEEQ6S8J3 1075 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 DZIP3Q86Y13 1208 aaKnown RBP8.31□□□□□ -1.08
VTI1A-201ENST00000393077 SLF2Q8IX21 1173 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 EXOC8Q8IYI6 725 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 TRIM47Q96LD4 638 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 SLC52A2Q9HAB3 445 aa8.31□□□□□ -1.08
VTI1A-201ENST00000393077 CDK12Q9NYV4 1490 aaPredicted RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 PNPLA6Q8IY17 1366 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 MROH2AA6NES4 1674 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 A0A1B0GVG6 124 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 TRIM43BA6NCK2 446 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 TOM1O60784 492 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms