RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 AMFRQ9UKV5 643 aa18.21■□□□□ 0.51
SCN3B-202ENST00000392770 ENOX1Q8TC92 643 aaKnown RBP18.21■□□□□ 0.51
SCN3B-202ENST00000392770 KIF28PB7ZC32 967 aa18.21■□□□□ 0.51
SCN3B-202ENST00000392770 TNNC2P02585 160 aa18.21■□□□□ 0.51
SCN3B-202ENST00000392770 PDE6CP51160 858 aa18.21■□□□□ 0.51
SCN3B-202ENST00000392770 SGMS1Q86VZ5 419 aa18.21■□□□□ 0.51
SCN3B-202ENST00000392770 SREK1Q8WXA9 508 aaKnown RBP18.21■□□□□ 0.51
SCN3B-202ENST00000392770 CNTNAP4Q9C0A0 1308 aa18.21■□□□□ 0.51
SCN3B-202ENST00000392770 ZBTB7AO95365 584 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 WHAMMP3Q1A5X7 153 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 ZNF365Q70YC5 407 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 SLC17A8Q8NDX2 589 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 RSPH14Q9UHP6 348 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 PCDHA6Q9UN73 950 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 PCDHA8Q9Y5H6 950 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 PSMC2P35998 433 aaKnown RBP18.2■□□□□ 0.5
SCN3B-202ENST00000392770 CLUL1Q15846 466 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 CRAMP1Q96RY5 1269 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 THAP9Q9H5L6 903 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 KCNK9Q9NPC2 374 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 PTPREP23469 700 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 AP3B2Q13367 1082 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 ARMC9Q7Z3E5 817 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 GPR161Q8N6U8 529 aaKnown RBP18.2■□□□□ 0.5
SCN3B-202ENST00000392770 CCDC63Q8NA47 563 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 ACCSQ96QU6 501 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 TMEM260Q9NX78 707 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 EPN1Q9Y6I3 576 aaPredicted RBP18.2■□□□□ 0.5
SCN3B-202ENST00000392770 CHRNA5P30532 468 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 CUL4BQ13620 913 aa18.2■□□□□ 0.5
SCN3B-202ENST00000392770 CTTNQ14247 550 aaKnown RBP18.2■□□□□ 0.5
SCN3B-202ENST00000392770 KDM6AO15550 1401 aaPredicted RBP18.19■□□□□ 0.5
SCN3B-202ENST00000392770 CLIC2O15247 247 aa18.19■□□□□ 0.5
SCN3B-202ENST00000392770 ASNSP08243 561 aa18.19■□□□□ 0.5
SCN3B-202ENST00000392770 PIK3CAP42336 1068 aa18.19■□□□□ 0.5
SCN3B-202ENST00000392770 LONRF2Q1L5Z9 754 aa18.19■□□□□ 0.5
SCN3B-202ENST00000392770 PPM1KQ8N3J5 372 aa18.19■□□□□ 0.5
SCN3B-202ENST00000392770 ZEB2O60315 1214 aa18.19■□□□□ 0.5
SCN3B-202ENST00000392770 AFPP02771 609 aaKnown RBP18.19■□□□□ 0.5
SCN3B-202ENST00000392770 IVLP07476 585 aa18.19■□□□□ 0.5
SCN3B-202ENST00000392770 INTS5Q6P9B9 1019 aaKnown RBP18.19■□□□□ 0.5
SCN3B-202ENST00000392770 ZNF579Q8NAF0 562 aaKnown RBP18.19■□□□□ 0.5
SCN3B-202ENST00000392770 KMT5AQ9NQR1 393 aa18.19■□□□□ 0.5
SCN3B-202ENST00000392770 ADD3Q9UEY8 706 aaKnown RBP18.19■□□□□ 0.5
SCN3B-202ENST00000392770 PSMD2Q13200 908 aa18.19■□□□□ 0.5
SCN3B-202ENST00000392770 CCDC97Q96F63 343 aaPredicted RBP18.19■□□□□ 0.5
SCN3B-202ENST00000392770 PSMD1Q99460 953 aa18.19■□□□□ 0.5
SCN3B-202ENST00000392770 PSDA5PKW4 1024 aaPredicted RBP18.19■□□□□ 0.5
SCN3B-202ENST00000392770 MAN2A1Q16706 1144 aa18.19■□□□□ 0.5
SCN3B-202ENST00000392770 IREB2P48200 963 aaKnown RBP18.18■□□□□ 0.5
SCN3B-202ENST00000392770 C12orf60Q5U649 245 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 PPP1R18Q6NYC8 613 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 ADGRB2O60241 1585 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 HNRNPDLO14979 420 aaKnown RBP18.18■□□□□ 0.5
SCN3B-202ENST00000392770 CCNA1P78396 465 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 RCSD1Q6JBY9 416 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 PROCA1Q8NCQ7 364 aaPredicted RBP18.18■□□□□ 0.5
SCN3B-202ENST00000392770 PLEKHA4Q9H4M7 779 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 HAUS4Q9H6D7 363 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 HYOU1Q9Y4L1 999 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 PTPROQ16827 1216 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 ADGRF4Q8IZF3 695 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 BARHL2Q9NY43 387 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 EIF2AK2P19525 551 aaKnown RBP18.18■□□□□ 0.5
SCN3B-202ENST00000392770 DPP9Q86TI2 863 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 FAM186BQ8IYM0 893 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 EMILIN3Q9NT22 766 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 FEM1BQ9UK73 627 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 E7EVH7 732 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 KCNK3O14649 394 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 FAM47CQ5HY64 1035 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 CEP170P1Q96L14 293 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 ASIC3Q9UHC3 531 aa18.18■□□□□ 0.5
SCN3B-202ENST00000392770 DAPK3O43293 454 aa18.17■□□□□ 0.5
SCN3B-202ENST00000392770 VSTM4Q8IW00 320 aa18.17■□□□□ 0.5
SCN3B-202ENST00000392770 IL25Q9H293 177 aa18.17■□□□□ 0.5
SCN3B-202ENST00000392770 PCIF1Q9H4Z3 704 aa18.17■□□□□ 0.5
SCN3B-202ENST00000392770 MYO5BQ9ULV0 1848 aa18.17■□□□□ 0.5
SCN3B-202ENST00000392770 STAMBPO95630 424 aa18.17■□□□□ 0.5
SCN3B-202ENST00000392770 GUCY1A2P33402 732 aa18.17■□□□□ 0.5
SCN3B-202ENST00000392770 TFDP1Q14186 410 aa18.17■□□□□ 0.5
SCN3B-202ENST00000392770 CCDC105Q8IYK2 499 aa18.17■□□□□ 0.5
SCN3B-202ENST00000392770 SPC25Q9HBM1 224 aa18.17■□□□□ 0.5
SCN3B-202ENST00000392770 FAM204AQ9H8W3 233 aa18.17■□□□□ 0.5
SCN3B-202ENST00000392770 CCNE1P24864 410 aa18.17■□□□□ 0.5
SCN3B-202ENST00000392770 STAG2Q8N3U4 1231 aa18.17■□□□□ 0.5
SCN3B-202ENST00000392770 FAM184BQ9ULE4 1060 aa18.17■□□□□ 0.5
SCN3B-202ENST00000392770 PPP2R5AQ15172 486 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 CEP128Q6ZU80 1094 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 PAK2Q13177 524 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 RNF207Q6ZRF8 634 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 FMR1NBQ8N0W7 255 aaPredicted RBP18.16■□□□□ 0.5
SCN3B-202ENST00000392770 ARFGAP2Q8N6H7 521 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 TXNDC16Q9P2K2 825 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 SUGT1Q9Y2Z0 365 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 USP17L15C9J2P7 530 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 USP17L13C9JLJ4 530 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 USP17L11C9JVI0 530 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 USP17L18D6R9N7 530 aa18.16■□□□□ 0.5
SCN3B-202ENST00000392770 USP17L22D6RA61 530 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms