RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 SQSTM1Q13501 440 aa4.58□□□□□ -1.68
RNU6-550P-201ENST00000391057 NOP9Q86U38 636 aaKnown RBP4.58□□□□□ -1.68
RNU6-550P-201ENST00000391057 SEC14L1Q92503 715 aa4.58□□□□□ -1.68
RNU6-550P-201ENST00000391057 TSPAN17Q96FV3 270 aa4.58□□□□□ -1.68
RNU6-550P-201ENST00000391057 ALG1Q9BT22 464 aa4.58□□□□□ -1.68
RNU6-550P-201ENST00000391057 EPB41L1Q9H4G0 881 aa4.58□□□□□ -1.68
RNU6-550P-201ENST00000391057 KANSL2Q9H9L4 492 aa4.58□□□□□ -1.68
RNU6-550P-201ENST00000391057 PPARGC1AQ9UBK2 798 aaKnown RBP4.58□□□□□ -1.68
RNU6-550P-201ENST00000391057 SFMBT1Q9UHJ3 866 aa4.58□□□□□ -1.68
RNU6-550P-201ENST00000391057 MBD1Q9UIS9 605 aaPredicted RBP4.58□□□□□ -1.68
RNU6-550P-201ENST00000391057 ESYT3A0FGR9 886 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 TCAF2A6NFQ2 919 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 NFIBO00712 420 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 EFCAB14O75071 495 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 DGKIO75912 1065 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 ZBTB7AO95365 584 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 SOD2P04179 222 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 TMEM253P0C7T8 217 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 SLC6A11P48066 632 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 ZNF200P98182 395 aaPredicted RBP4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 SLC9A5Q14940 896 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 CHRNA2Q15822 529 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 HOMER1Q86YM7 354 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 BHLHE22Q8NFJ8 381 aaPredicted RBP4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 ALG3Q92685 438 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 KCNN1Q92952 543 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 RNPC3Q96LT9 517 aaKnown RBP4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 MRPL4Q9BYD3 311 aaKnown RBP4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 SLC52A2Q9HAB3 445 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 NCOA5Q9HCD5 579 aaKnown RBP4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 TMEM260Q9NX78 707 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 SIT1Q9Y3P8 196 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 HCFC2Q9Y5Z7 792 aa4.57□□□□□ -1.68
RNU6-550P-201ENST00000391057 FAM47E-STBD1D6RA91 191 aa4.56□□□□□ -1.68
RNU6-550P-201ENST00000391057 ETV2O00321 342 aaPredicted RBP4.56□□□□□ -1.68
RNU6-550P-201ENST00000391057 IGSF3O75054 1194 aa4.56□□□□□ -1.68
RNU6-550P-201ENST00000391057 GLDCP23378 1020 aa4.56□□□□□ -1.68
RNU6-550P-201ENST00000391057 CDR1P51861 262 aa4.56□□□□□ -1.68
RNU6-550P-201ENST00000391057 DLG4P78352 724 aa4.56□□□□□ -1.68
RNU6-550P-201ENST00000391057 GUCY1A3Q02108 690 aa4.56□□□□□ -1.68
RNU6-550P-201ENST00000391057 PAK1Q13153 545 aa4.56□□□□□ -1.68
RNU6-550P-201ENST00000391057 STEAP3Q658P3 488 aa4.56□□□□□ -1.68
RNU6-550P-201ENST00000391057 JAZF1Q86VZ6 243 aa4.56□□□□□ -1.68
RNU6-550P-201ENST00000391057 JAM3Q9BX67 310 aa4.56□□□□□ -1.68
RNU6-550P-201ENST00000391057 SGPP1Q9BX95 441 aa4.56□□□□□ -1.68
RNU6-550P-201ENST00000391057 CNTD2Q9H8S5 307 aa4.56□□□□□ -1.68
RNU6-550P-201ENST00000391057 MRPL42Q9Y6G3 142 aaKnown RBP4.56□□□□□ -1.68
RNU6-550P-201ENST00000391057 KRIT1O00522 736 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 PLD2O14939 933 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 N4BP3O15049 544 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 SGSM2O43147 1006 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 MAFKO60675 156 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 CDC45O75419 566 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 ASMTLO95671 621 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 CRTAMO95727 393 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 TSPAN15O95858 294 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 MED14OSP0DP75 135 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 GNAT1P11488 350 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 PFKLP17858 780 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 EPHB3P54753 998 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 NCKAP1LP55160 1127 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 TARBP2Q15633 366 aaKnown RBP4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 TRIM61Q5EBN2 209 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 EMC4Q5J8M3 183 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 ATG14Q6ZNE5 492 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 BRAPQ7Z569 592 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 LDHDQ86WU2 507 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 GSTCDQ8NEC7 633 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 MZB1Q8WU39 189 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 APPBP2Q92624 585 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 KCNJ15Q99712 375 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 CDIP1Q9H305 208 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 BCAS3Q9H6U6 928 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 IPPKQ9H8X2 491 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 GCM1Q9NP62 436 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 FANCLQ9NW38 375 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 PALD1Q9ULE6 856 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 ZNF652Q9Y2D9 606 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 PCDHB4Q9Y5E5 795 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 PCDHA8Q9Y5H6 950 aa4.55□□□□□ -1.68
RNU6-550P-201ENST00000391057 ARVCFO00192 962 aa4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 HGSO14964 777 aaPredicted RBP4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 RAPGEF3O95398 923 aa4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 C8AP07357 584 aa4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 C1QTNF9P0C862 333 aa4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 FBLN1P23142 703 aa4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 PMLP29590 882 aa4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 RAP1GAPP47736 663 aa4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 SPIRE1Q08AE8 756 aa4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 TCEA2Q15560 299 aa4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 FNDC3BQ53EP0 1204 aaKnown RBP4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 OTOP3Q7RTS5 596 aa4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 MILR1Q7Z6M3 343 aa4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 AMIGO3Q86WK7 504 aa4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 SYNPOQ8N3V7 929 aa4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 SLC7A14Q8TBB6 771 aa4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 PIP4K2CQ8TBX8 421 aa4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 MAGEB10Q96LZ2 347 aaPredicted RBP4.54□□□□□ -1.68
RNU6-550P-201ENST00000391057 RNF38Q9H0F5 515 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms