RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 TRIT1Q9H3H1 467 aaKnown RBP3.97□□□□□ -1.77
RNU6-140P-201ENST00000384566 IPPKQ9H8X2 491 aa3.97□□□□□ -1.77
RNU6-140P-201ENST00000384566 VTA1Q9NP79 307 aa3.97□□□□□ -1.77
RNU6-140P-201ENST00000384566 ZNF652Q9Y2D9 606 aa3.97□□□□□ -1.77
RNU6-140P-201ENST00000384566 GIT1Q9Y2X7 761 aa3.97□□□□□ -1.77
RNU6-140P-201ENST00000384566 SSU72P8A0A1W2PR75 194 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 GNAT3A8MTJ3 354 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 PRR33A8MZF0 331 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 ARHGEF15O94989 841 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 MT-CO1P00395 513 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 RBP3P10745 1247 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 VCAM1P19320 739 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 ENDOUP21128 410 aaKnown RBP3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 GRK2P25098 689 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 TPP2P29144 1249 aaPredicted RBP3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 CYP2C19P33261 490 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 GRK3P35626 688 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 GRIK1P39086 918 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 IARSP41252 1262 aaKnown RBP3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 GTF2A2P52657 109 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 PCBP3P57721 371 aaKnown RBP3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 LACTBP83111 547 aaPredicted RBP3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 LSAMPQ13449 338 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 TCIRG1Q13488 830 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 GTF2H3Q13889 308 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 VPS72Q15906 364 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 CRY1Q16526 586 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 CYP27C1Q4G0S4 372 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 RTP2Q5QGT7 225 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 TMEM240Q5SV17 173 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 BEND4Q6ZU67 534 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 OTOP1Q7RTM1 612 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 PNMA8AQ86V59 439 aaPredicted RBP3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 TPH2Q8IWU9 490 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 DZIP1LQ8IYY4 767 aaKnown RBP3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 ARMC10Q8N2F6 343 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 CPA6Q8N4T0 437 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 USHBP1Q8N6Y0 703 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 EFHBQ8N7U6 833 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 CLRN3Q8NCR9 226 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 C1orf162Q8NEQ5 155 aaPredicted RBP3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 SVIPQ8NHG7 77 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 FAXDC2Q96IV6 333 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 HEXIM2Q96MH2 286 aaKnown RBP3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 MPHOSPH6Q99547 160 aaKnown RBP3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 DUSP15Q9H1R2 295 aaPredicted RBP3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 KCNF1Q9H3M0 494 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 PRDM11Q9NQV5 511 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 OXSMQ9NWU1 459 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 OBP2AQ9NY56 170 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 PCDHA2Q9Y5H9 948 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 CAPN6Q9Y6Q1 641 aa3.96□□□□□ -1.78
RNU6-140P-201ENST00000384566 VSTM5A8MXK1 200 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 FAM155AB1AL88 458 aaPredicted RBP3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 H7C1D1 291 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 RBAK-RBAKDNI3L0D1 243 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 FZD9O00144 591 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 FGF10O15520 208 aaPredicted RBP3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 TBC1D8O95759 1140 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 SYPP08247 313 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 PF4V1P10720 104 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 YBX3P16989 372 aaKnown RBP eCLIP3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 RBM10P98175 930 aaKnown RBP3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 PURAQ00577 322 aaKnown RBP3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 ADGRE1Q14246 886 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 PCBP2Q15366 365 aaKnown RBP eCLIP3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 DDB1Q16531 1140 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 INF2Q27J81 1249 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 LONRF3Q496Y0 759 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 BROXQ5VW32 411 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 CREB3L3Q68CJ9 461 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 PGM2L1Q6PCE3 622 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 TSHZ1Q6ZSZ6 1077 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 TSPYL5Q86VY4 417 aaPredicted RBP3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 RASSF3Q86WH2 238 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 CLEC10AQ8IUN9 316 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 ZNF526Q8TF50 670 aaPredicted RBP3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 PTCHD1Q96NR3 888 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 CHST12Q9NRB3 414 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 CATSPERZQ9NTU4 200 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 C14orf119Q9NWQ9 140 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 MKS1Q9NXB0 559 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 H2AFY2Q9P0M6 372 aaPredicted RBP3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 RCAN3Q9UKA8 241 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 TCFL5Q9UL49 500 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 CBLCQ9ULV8 474 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 TIMM13Q9Y5L4 95 aaPredicted RBP3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 MRFAP1Q9Y605 127 aa3.95□□□□□ -1.78
RNU6-140P-201ENST00000384566 SLC12A8A0AV02 714 aa3.94□□□□□ -1.78
RNU6-140P-201ENST00000384566 TRIM75PA6NK02 468 aa3.94□□□□□ -1.78
RNU6-140P-201ENST00000384566 ERC2O15083 957 aa3.94□□□□□ -1.78
RNU6-140P-201ENST00000384566 DHX15O43143 795 aaKnown RBP3.94□□□□□ -1.78
RNU6-140P-201ENST00000384566 TGM5O43548 720 aa3.94□□□□□ -1.78
RNU6-140P-201ENST00000384566 LDHAP00338 332 aaKnown RBP3.94□□□□□ -1.78
RNU6-140P-201ENST00000384566 LTFP02788 710 aa3.94□□□□□ -1.78
RNU6-140P-201ENST00000384566 TRIM27P14373 513 aa3.94□□□□□ -1.78
RNU6-140P-201ENST00000384566 LSP1P33241 339 aa3.94□□□□□ -1.78
RNU6-140P-201ENST00000384566 RPL11P62913 178 aaKnown RBP3.94□□□□□ -1.78
RNU6-140P-201ENST00000384566 PHC1P78364 1004 aa3.94□□□□□ -1.78
RNU6-140P-201ENST00000384566 SAFB2Q14151 953 aaKnown RBP eCLIP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms