RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 CHD7Q9P2D1 2997 aa20.85■□□□□ 0.93
RPUSD3-201ENST00000383820 DHX16O60231 1041 aaKnown RBP20.85■□□□□ 0.93
RPUSD3-201ENST00000383820 EIF3JO75822 258 aaKnown RBP20.85■□□□□ 0.93
RPUSD3-201ENST00000383820 GHRHRQ02643 423 aa20.85■□□□□ 0.93
RPUSD3-201ENST00000383820 RBL2Q08999 1139 aa20.85■□□□□ 0.93
RPUSD3-201ENST00000383820 DGKDQ16760 1214 aa20.85■□□□□ 0.93
RPUSD3-201ENST00000383820 ARHGEF16Q5VV41 709 aa20.85■□□□□ 0.93
RPUSD3-201ENST00000383820 HERC6Q8IVU3 1022 aa20.85■□□□□ 0.93
RPUSD3-201ENST00000383820 IL27Q8NEV9 243 aa20.85■□□□□ 0.93
RPUSD3-201ENST00000383820 ADAMTS19Q8TE59 1207 aa20.85■□□□□ 0.93
RPUSD3-201ENST00000383820 PPP1R13LQ8WUF5 828 aa20.85■□□□□ 0.93
RPUSD3-201ENST00000383820 KAT2BQ92831 832 aa20.85■□□□□ 0.93
RPUSD3-201ENST00000383820 UBAC1Q9BSL1 405 aa20.85■□□□□ 0.93
RPUSD3-201ENST00000383820 MAP3K20Q9NYL2 800 aaKnown RBP20.85■□□□□ 0.93
RPUSD3-201ENST00000383820 DDX41Q9UJV9 622 aaKnown RBP20.85■□□□□ 0.93
RPUSD3-201ENST00000383820 GTPBP6O43824 516 aaPredicted RBP20.84■□□□□ 0.93
RPUSD3-201ENST00000383820 IGHDP01880 384 aa20.84■□□□□ 0.93
RPUSD3-201ENST00000383820 GDF6Q6KF10 455 aaPredicted RBP20.84■□□□□ 0.93
RPUSD3-201ENST00000383820 SAMD3Q8N6K7 520 aa20.84■□□□□ 0.93
RPUSD3-201ENST00000383820 CTAGE1Q96RT6 745 aa20.84■□□□□ 0.93
RPUSD3-201ENST00000383820 KATNAL1Q9BW62 490 aa20.84■□□□□ 0.93
RPUSD3-201ENST00000383820 AMNQ9BXJ7 453 aa20.84■□□□□ 0.93
RPUSD3-201ENST00000383820 VAT1LQ9HCJ6 419 aa20.84■□□□□ 0.93
RPUSD3-201ENST00000383820 PXMP2Q9NR77 195 aa20.84■□□□□ 0.93
RPUSD3-201ENST00000383820 TRIP12Q14669 1992 aaPredicted RBP20.83■□□□□ 0.93
RPUSD3-201ENST00000383820 NR3C2P08235 984 aa20.83■□□□□ 0.93
RPUSD3-201ENST00000383820 SELPP16109 830 aa20.83■□□□□ 0.93
RPUSD3-201ENST00000383820 HSD17B4P51659 736 aa20.83■□□□□ 0.93
RPUSD3-201ENST00000383820 CHMP4BP1P59074 171 aa20.83■□□□□ 0.93
RPUSD3-201ENST00000383820 LAMC2Q13753 1193 aa20.83■□□□□ 0.93
RPUSD3-201ENST00000383820 AAK1Q2M2I8 961 aa20.83■□□□□ 0.93
RPUSD3-201ENST00000383820 IFIT1BQ5T764 474 aaKnown RBP20.83■□□□□ 0.93
RPUSD3-201ENST00000383820 CHST3Q7LGC8 479 aa20.83■□□□□ 0.93
RPUSD3-201ENST00000383820 GTF2IRD1Q9UHL9 959 aa20.83■□□□□ 0.93
RPUSD3-201ENST00000383820 TET1Q8NFU7 2136 aa20.83■□□□□ 0.92
RPUSD3-201ENST00000383820 CFBP00751 764 aa20.82■□□□□ 0.92
RPUSD3-201ENST00000383820 EIF2AK2P19525 551 aaKnown RBP20.82■□□□□ 0.92
RPUSD3-201ENST00000383820 KCNJ6P48051 423 aa20.82■□□□□ 0.92
RPUSD3-201ENST00000383820 TAP1Q03518 808 aa20.82■□□□□ 0.92
RPUSD3-201ENST00000383820 LRRC8DQ7L1W4 858 aa20.82■□□□□ 0.92
RPUSD3-201ENST00000383820 PPTC7Q8NI37 304 aa20.82■□□□□ 0.92
RPUSD3-201ENST00000383820 MTMR8Q96EF0 704 aa20.82■□□□□ 0.92
RPUSD3-201ENST00000383820 UHRF1Q96T88 793 aaPredicted RBP20.82■□□□□ 0.92
RPUSD3-201ENST00000383820 MTCH2Q9Y6C9 303 aa20.82■□□□□ 0.92
RPUSD3-201ENST00000383820 MRVI1Q9Y6F6 885 aa20.82■□□□□ 0.92
RPUSD3-201ENST00000383820 KLRF2D3W0D1 207 aa20.81■□□□□ 0.92
RPUSD3-201ENST00000383820 OPLAHO14841 1288 aa20.81■□□□□ 0.92
RPUSD3-201ENST00000383820 F2P00734 622 aa20.81■□□□□ 0.92
RPUSD3-201ENST00000383820 TRAF1Q13077 416 aa20.81■□□□□ 0.92
RPUSD3-201ENST00000383820 SEC23AQ15436 765 aa20.81■□□□□ 0.92
RPUSD3-201ENST00000383820 KCNV1Q6PIU1 500 aa20.81■□□□□ 0.92
RPUSD3-201ENST00000383820 MICALL1Q8N3F8 863 aa20.81■□□□□ 0.92
RPUSD3-201ENST00000383820 C7orf31Q8N865 590 aa20.81■□□□□ 0.92
RPUSD3-201ENST00000383820 DHX38Q92620 1227 aaKnown RBP20.81■□□□□ 0.92
RPUSD3-201ENST00000383820 HAS3O00219 553 aa20.8■□□□□ 0.92
RPUSD3-201ENST00000383820 ZBTB5O15062 677 aa20.8■□□□□ 0.92
RPUSD3-201ENST00000383820 CXCL10P02778 98 aa20.8■□□□□ 0.92
RPUSD3-201ENST00000383820 HOXD8P13378 290 aaPredicted RBP20.8■□□□□ 0.92
RPUSD3-201ENST00000383820 PSEN2P49810 448 aa20.8■□□□□ 0.92
RPUSD3-201ENST00000383820 GPNMBQ14956 572 aa20.8■□□□□ 0.92
RPUSD3-201ENST00000383820 CNKSR3Q6P9H4 555 aa20.8■□□□□ 0.92
RPUSD3-201ENST00000383820 STOX1Q6ZVD7 989 aa20.8■□□□□ 0.92
RPUSD3-201ENST00000383820 DHX37Q8IY37 1157 aaKnown RBP20.8■□□□□ 0.92
RPUSD3-201ENST00000383820 STAG2Q8N3U4 1231 aa20.8■□□□□ 0.92
RPUSD3-201ENST00000383820 PDCD2LQ9BRP1 358 aa20.8■□□□□ 0.92
RPUSD3-201ENST00000383820 HDAC6Q9UBN7 1215 aa20.8■□□□□ 0.92
RPUSD3-201ENST00000383820 RFXAPO00287 272 aa20.79■□□□□ 0.92
RPUSD3-201ENST00000383820 TLL1O43897 1013 aa20.79■□□□□ 0.92
RPUSD3-201ENST00000383820 CKBP12277 381 aa20.79■□□□□ 0.92
RPUSD3-201ENST00000383820 BMP1P13497 986 aa20.79■□□□□ 0.92
RPUSD3-201ENST00000383820 WDR5P61964 334 aaKnown RBP20.79■□□□□ 0.92
RPUSD3-201ENST00000383820 PTK7Q13308 1070 aa20.79■□□□□ 0.92
RPUSD3-201ENST00000383820 MFSD10Q14728 455 aa20.79■□□□□ 0.92
RPUSD3-201ENST00000383820 CERS4Q9HA82 394 aa20.79■□□□□ 0.92
RPUSD3-201ENST00000383820 MAD2L2Q9UI95 211 aa20.79■□□□□ 0.92
RPUSD3-201ENST00000383820 PCDHA1Q9Y5I3 950 aa20.79■□□□□ 0.92
RPUSD3-201ENST00000383820 TRANK1O15050 2925 aa20.79■□□□□ 0.92
RPUSD3-201ENST00000383820 PTPRSQ13332 1948 aa20.78■□□□□ 0.92
RPUSD3-201ENST00000383820 ABHD14A-ACY1A0A1B0GW23 586 aa20.78■□□□□ 0.92
RPUSD3-201ENST00000383820 PALM3A6NDB9 673 aaPredicted RBP20.78■□□□□ 0.92
RPUSD3-201ENST00000383820 EPOPA6NHQ4 379 aa20.78■□□□□ 0.92
RPUSD3-201ENST00000383820 EFCAB14O75071 495 aa20.78■□□□□ 0.92
RPUSD3-201ENST00000383820 PPFIA4O75335 1185 aa20.78■□□□□ 0.92
RPUSD3-201ENST00000383820 TGFB3P10600 412 aa20.78■□□□□ 0.92
RPUSD3-201ENST00000383820 KIAA0753Q2KHM9 967 aa20.78■□□□□ 0.92
RPUSD3-201ENST00000383820 VSIG10LQ86VR7 867 aa20.78■□□□□ 0.92
RPUSD3-201ENST00000383820 ARNTL2Q8WYA1 636 aa20.78■□□□□ 0.92
RPUSD3-201ENST00000383820 ALG1Q9BT22 464 aa20.78■□□□□ 0.92
RPUSD3-201ENST00000383820 COG5Q9UP83 839 aa20.78■□□□□ 0.92
RPUSD3-201ENST00000383820 MYH7BA7E2Y1 1941 aa20.78■□□□□ 0.92
RPUSD3-201ENST00000383820 PRRC2BQ5JSZ5 2229 aaKnown RBP20.77■□□□□ 0.92
RPUSD3-201ENST00000383820 PPP1R11O60927 126 aaPredicted RBP20.77■□□□□ 0.92
RPUSD3-201ENST00000383820 NBNO60934 754 aa20.77■□□□□ 0.92
RPUSD3-201ENST00000383820 RGS20O76081 388 aa20.77■□□□□ 0.92
RPUSD3-201ENST00000383820 ARHGEF15O94989 841 aa20.77■□□□□ 0.92
RPUSD3-201ENST00000383820 TRDNQ13061 729 aa20.77■□□□□ 0.92
RPUSD3-201ENST00000383820 SKIV2LQ15477 1246 aaKnown RBP20.77■□□□□ 0.92
RPUSD3-201ENST00000383820 MYSM1Q5VVJ2 828 aa20.77■□□□□ 0.92
RPUSD3-201ENST00000383820 MYCLP12524 364 aaPredicted RBP20.76■□□□□ 0.91
RPUSD3-201ENST00000383820 PGM5Q15124 567 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms