RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 HSD17B4P51659 736 aa20.03■□□□□ 0.8
HMGN1-204ENST00000380749 CHMP4BP1P59074 171 aa20.03■□□□□ 0.8
HMGN1-204ENST00000380749 GHRHRQ02643 423 aa20.03■□□□□ 0.8
HMGN1-204ENST00000380749 ARHGAP1Q07960 439 aa20.03■□□□□ 0.8
HMGN1-204ENST00000380749 BFSP2Q13515 415 aa20.03■□□□□ 0.8
HMGN1-204ENST00000380749 LY6KQ17RY6 165 aa20.03■□□□□ 0.8
HMGN1-204ENST00000380749 CCDC155Q8N6L0 562 aa20.03■□□□□ 0.8
HMGN1-204ENST00000380749 RETREG2Q8NC44 543 aa20.03■□□□□ 0.8
HMGN1-204ENST00000380749 MTMR8Q96EF0 704 aa20.03■□□□□ 0.8
HMGN1-204ENST00000380749 SLC28A3Q9HAS3 691 aa20.03■□□□□ 0.8
HMGN1-204ENST00000380749 MAP3K20Q9NYL2 800 aaKnown RBP20.03■□□□□ 0.8
HMGN1-204ENST00000380749 REV3LO60673 3130 aa20.03■□□□□ 0.8
HMGN1-204ENST00000380749 PALM3A6NDB9 673 aaPredicted RBP20.02■□□□□ 0.8
HMGN1-204ENST00000380749 NR3C2P08235 984 aa20.02■□□□□ 0.8
HMGN1-204ENST00000380749 CASTP20810 708 aaKnown RBP20.02■□□□□ 0.8
HMGN1-204ENST00000380749 GRM4Q14833 912 aa20.02■□□□□ 0.8
HMGN1-204ENST00000380749 WTAPQ15007 396 aa20.02■□□□□ 0.8
HMGN1-204ENST00000380749 CHST3Q7LGC8 479 aa20.02■□□□□ 0.8
HMGN1-204ENST00000380749 DEFB128Q7Z7B8 93 aa20.02■□□□□ 0.8
HMGN1-204ENST00000380749 HOMER1Q86YM7 354 aa20.02■□□□□ 0.8
HMGN1-204ENST00000380749 NCOA7Q8NI08 942 aa20.02■□□□□ 0.8
HMGN1-204ENST00000380749 NKX2-4Q9H2Z4 354 aa20.02■□□□□ 0.8
HMGN1-204ENST00000380749 PRDM12Q9H4Q4 367 aa20.02■□□□□ 0.8
HMGN1-204ENST00000380749 PCDHA1Q9Y5I3 950 aa20.02■□□□□ 0.8
HMGN1-204ENST00000380749 MRVI1Q9Y6F6 885 aa20.02■□□□□ 0.8
HMGN1-204ENST00000380749 PTH1RQ03431 593 aa20.01■□□□□ 0.79
HMGN1-204ENST00000380749 DGKDQ16760 1214 aa20.01■□□□□ 0.79
HMGN1-204ENST00000380749 SAMD3Q8N6K7 520 aa20.01■□□□□ 0.79
HMGN1-204ENST00000380749 PPP1R13LQ8WUF5 828 aa20.01■□□□□ 0.79
HMGN1-204ENST00000380749 EMID1Q96A84 441 aaPredicted RBP20.01■□□□□ 0.79
HMGN1-204ENST00000380749 OPLAHO14841 1288 aa20■□□□□ 0.79
HMGN1-204ENST00000380749 SGSM2O43147 1006 aa20■□□□□ 0.79
HMGN1-204ENST00000380749 PPP1R11O60927 126 aaPredicted RBP20■□□□□ 0.79
HMGN1-204ENST00000380749 ATP2A2P16615 1042 aaKnown RBP20■□□□□ 0.79
HMGN1-204ENST00000380749 PTGISQ16647 500 aa20■□□□□ 0.79
HMGN1-204ENST00000380749 SESTD1Q86VW0 696 aa20■□□□□ 0.79
HMGN1-204ENST00000380749 CAGE1Q8TC20 777 aa20■□□□□ 0.79
HMGN1-204ENST00000380749 KATNAL1Q9BW62 490 aa20■□□□□ 0.79
HMGN1-204ENST00000380749 DDX41Q9UJV9 622 aaKnown RBP20■□□□□ 0.79
HMGN1-204ENST00000380749 PCDHA11Q9Y5I1 949 aa20■□□□□ 0.79
HMGN1-204ENST00000380749 BRWD1Q9NSI6 2320 aa20■□□□□ 0.79
HMGN1-204ENST00000380749 MICAL3Q7RTP6 2002 aa20■□□□□ 0.79
HMGN1-204ENST00000380749 E7EWF7 191 aa19.99■□□□□ 0.79
HMGN1-204ENST00000380749 MYCLP12524 364 aaPredicted RBP19.99■□□□□ 0.79
HMGN1-204ENST00000380749 IRX6P78412 446 aaPredicted RBP19.99■□□□□ 0.79
HMGN1-204ENST00000380749 LAMC2Q13753 1193 aa19.99■□□□□ 0.79
HMGN1-204ENST00000380749 PPP2R2DQ66LE6 453 aa19.99■□□□□ 0.79
HMGN1-204ENST00000380749 KCNV1Q6PIU1 500 aa19.99■□□□□ 0.79
HMGN1-204ENST00000380749 VWCEQ96DN2 955 aa19.99■□□□□ 0.79
HMGN1-204ENST00000380749 PDCD2LQ9BRP1 358 aa19.99■□□□□ 0.79
HMGN1-204ENST00000380749 YBX2Q9Y2T7 364 aaKnown RBP19.99■□□□□ 0.79
HMGN1-204ENST00000380749 BDP1A6H8Y1 2624 aa19.99■□□□□ 0.79
HMGN1-204ENST00000380749 IQCF3P0C7M6 154 aa19.98■□□□□ 0.79
HMGN1-204ENST00000380749 HOXA13P31271 388 aaPredicted RBP19.98■□□□□ 0.79
HMGN1-204ENST00000380749 TMEM67Q5HYA8 995 aa19.98■□□□□ 0.79
HMGN1-204ENST00000380749 STOX1Q6ZVD7 989 aa19.98■□□□□ 0.79
HMGN1-204ENST00000380749 CATIPQ7Z7H3 387 aa19.98■□□□□ 0.79
HMGN1-204ENST00000380749 DHX37Q8IY37 1157 aaKnown RBP19.98■□□□□ 0.79
HMGN1-204ENST00000380749 USP38Q8NB14 1042 aa19.98■□□□□ 0.79
HMGN1-204ENST00000380749 PPTC7Q8NI37 304 aa19.98■□□□□ 0.79
HMGN1-204ENST00000380749 AFAP1L1Q8TED9 768 aa19.98■□□□□ 0.79
HMGN1-204ENST00000380749 PIGSQ96S52 555 aa19.98■□□□□ 0.79
HMGN1-204ENST00000380749 SLC9A7Q96T83 725 aa19.98■□□□□ 0.79
HMGN1-204ENST00000380749 FTOQ9C0B1 505 aaKnown RBP eCLIP19.98■□□□□ 0.797e-6■■□□□ 12.9
HMGN1-204ENST00000380749 RIOX1Q9H6W3 641 aa19.98■□□□□ 0.79
HMGN1-204ENST00000380749 GCOM1H8Y6P7 765 aaPredicted RBP19.97■□□□□ 0.79
HMGN1-204ENST00000380749 POLR2MP0CAP2 368 aa19.97■□□□□ 0.79
HMGN1-204ENST00000380749 RABGGTBP53611 331 aa19.97■□□□□ 0.79
HMGN1-204ENST00000380749 PGM5Q15124 567 aa19.97■□□□□ 0.79
HMGN1-204ENST00000380749 GDF6Q6KF10 455 aaPredicted RBP19.97■□□□□ 0.79
HMGN1-204ENST00000380749 C7orf31Q8N865 590 aa19.97■□□□□ 0.79
HMGN1-204ENST00000380749 KAT2BQ92831 832 aa19.97■□□□□ 0.79
HMGN1-204ENST00000380749 PNMA6FA0A0J9YX94 578 aa19.96■□□□□ 0.79
HMGN1-204ENST00000380749 F2P00734 622 aa19.96■□□□□ 0.79
HMGN1-204ENST00000380749 CCND2P30279 289 aa19.96■□□□□ 0.79
HMGN1-204ENST00000380749 TROAPQ12815 778 aa19.96■□□□□ 0.79
HMGN1-204ENST00000380749 SENP2Q9HC62 589 aa19.96■□□□□ 0.79
HMGN1-204ENST00000380749 GTF2IRD1Q9UHL9 959 aa19.96■□□□□ 0.79
HMGN1-204ENST00000380749 COL4A4P53420 1690 aaPredicted RBP19.96■□□□□ 0.79
HMGN1-204ENST00000380749 BAIAP3O94812 1187 aa19.95■□□□□ 0.79
HMGN1-204ENST00000380749 ZNF286BP0CG31 522 aa19.95■□□□□ 0.79
HMGN1-204ENST00000380749 PSEN2P49810 448 aa19.95■□□□□ 0.79
HMGN1-204ENST00000380749 MFSD10Q14728 455 aa19.95■□□□□ 0.79
HMGN1-204ENST00000380749 SLC35G1Q2M3R5 365 aa19.95■□□□□ 0.79
HMGN1-204ENST00000380749 FCHSD1Q86WN1 690 aa19.95■□□□□ 0.79
HMGN1-204ENST00000380749 SYMPKQ92797 1274 aaKnown RBP19.95■□□□□ 0.79
HMGN1-204ENST00000380749 MAP4K1Q92918 833 aa19.95■□□□□ 0.79
HMGN1-204ENST00000380749 RBM8AQ9Y5S9 174 aaKnown RBP19.95■□□□□ 0.79
HMGN1-204ENST00000380749 TAF6LQ9Y6J9 622 aa19.95■□□□□ 0.79
HMGN1-204ENST00000380749 XIRP2A4UGR9 3374 aa19.95■□□□□ 0.78
HMGN1-204ENST00000380749 CYTH3O43739 400 aa19.95■□□□□ 0.78
HMGN1-204ENST00000380749 DDAH1O94760 285 aa19.95■□□□□ 0.78
HMGN1-204ENST00000380749 PARNO95453 639 aaKnown RBP19.95■□□□□ 0.78
HMGN1-204ENST00000380749 SELPP16109 830 aa19.95■□□□□ 0.78
HMGN1-204ENST00000380749 IGFBP4P22692 258 aa19.95■□□□□ 0.78
HMGN1-204ENST00000380749 KIAA0753Q2KHM9 967 aa19.95■□□□□ 0.78
HMGN1-204ENST00000380749 CASC1Q6TDU7 716 aa19.95■□□□□ 0.78
HMGN1-204ENST00000380749 LRRC8DQ7L1W4 858 aa19.95■□□□□ 0.78
HMGN1-204ENST00000380749 VSIG10LQ86VR7 867 aa19.95■□□□□ 0.78
HMGN1-204ENST00000380749 MB21D2Q8IYB1 491 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms