RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 FAM170AA1A519 330 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 RPS6KA4O75676 772 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 PRDX5P30044 214 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 CDC27P30260 824 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 ADCY8P40145 1251 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 MYL7Q01449 175 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 CYP27A1Q02318 531 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 ADAT2Q7Z6V5 191 aaKnown RBP12.34□□□□□ -0.43
RPGR-203ENST00000378505 SLC17A8Q8NDX2 589 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 GDAQ9Y2T3 454 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 CYP19A1P11511 503 aaPredicted RBP12.33□□□□□ -0.44
RPGR-203ENST00000378505 STOX1Q6ZVD7 989 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 ATG9AQ7Z3C6 839 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 NT5C1BQ96P26 610 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 ZNF577Q9BSK1 485 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 RAB20Q9NX57 234 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 GSG1L2A8MUP6 293 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 HGSO14964 777 aaPredicted RBP12.33□□□□□ -0.44
RPGR-203ENST00000378505 PLA2G4BP0C869 781 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 VPS41P49754 854 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 POMGNT1Q8WZA1 660 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 MLXIPQ9HAP2 919 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 TYW1Q9NV66 732 aaKnown RBP12.33□□□□□ -0.44
RPGR-203ENST00000378505 TRPC5Q9UL62 973 aaPredicted RBP12.33□□□□□ -0.44
RPGR-203ENST00000378505 A0A1B0GUA9 196 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 HEXIM1O94992 359 aaKnown RBP12.33□□□□□ -0.44
RPGR-203ENST00000378505 CACNB1Q02641 598 aaPredicted RBP12.33□□□□□ -0.44
RPGR-203ENST00000378505 PTK2Q05397 1052 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 RASA3Q14644 834 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 NAA35Q5VZE5 725 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 ST7Q9NRC1 585 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 MYO1FO00160 1098 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 CIB2O75838 187 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 NSFP46459 744 aaKnown RBP12.33□□□□□ -0.44
RPGR-203ENST00000378505 MFAP3P55082 362 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 GKAP1Q5VSY0 366 aaPredicted RBP12.33□□□□□ -0.44
RPGR-203ENST00000378505 FBXO38Q6PIJ6 1188 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 SPATA24Q86W54 205 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 ANKRD42Q8N9B4 389 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.33□□□□□ -0.44
RPGR-203ENST00000378505 MAGOHBQ96A72 148 aaKnown RBP12.33□□□□□ -0.44
RPGR-203ENST00000378505 UBN2Q6ZU65 1347 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 PTPRUQ92729 1446 aa12.33□□□□□ -0.44
RPGR-203ENST00000378505 PASKQ96RG2 1323 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 SCARF1Q14162 830 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 NEDD9Q14511 834 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 HADHQ16836 314 aaKnown RBP12.32□□□□□ -0.44
RPGR-203ENST00000378505 RUNDC3BQ96NL0 473 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 DCP1AQ9NPI6 582 aaPredicted RBP12.32□□□□□ -0.44
RPGR-203ENST00000378505 PGRMC1O00264 195 aaKnown RBP12.32□□□□□ -0.44
RPGR-203ENST00000378505 POLR2BP30876 1174 aaKnown RBP12.32□□□□□ -0.44
RPGR-203ENST00000378505 CUL4BQ13620 913 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 C10orf76Q5T2E6 689 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 FOXP4Q8IVH2 680 aaPredicted RBP12.32□□□□□ -0.44
RPGR-203ENST00000378505 ATP6V0A1Q93050 837 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 RNF34Q969K3 372 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 COA1Q9GZY4 146 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 EPB41L5Q9HCM4 733 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 FAM114A2Q9NRY5 505 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 CSADQ9Y600 493 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 PTPRMP28827 1452 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 ECM2O94769 699 aaPredicted RBP12.32□□□□□ -0.44
RPGR-203ENST00000378505 SERPING1P05155 500 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 CYP2D6P10635 497 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 HSPA1LP34931 641 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 KIF11P52732 1056 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 MESDQ14696 234 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 CCDC144BQ3MJ40 725 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 PPP4R3CPQ6ZMV5 832 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 BBOF1Q8ND07 529 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 TMEM47Q9BQJ4 181 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 DBNDD1Q9H9R9 158 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 RIPOR2Q9Y4F9 1068 aa12.32□□□□□ -0.44
RPGR-203ENST00000378505 HNRNPDLO14979 420 aaKnown RBP12.31□□□□□ -0.44
RPGR-203ENST00000378505 ZMYND10O75800 440 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 ANKRD20A3Q5VUR7 823 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 ANKRD35Q8N283 1001 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 RAB3IL1Q8TBN0 382 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 MGARPQ8TDB4 240 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 OXER1Q8TDS5 423 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 RSAD2Q8WXG1 361 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 MCUR1Q96AQ8 359 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 NARFQ9UHQ1 456 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 REREQ9P2R6 1566 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 LRRIQ4A6NIV6 560 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 LGALS16A8MUM7 142 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 UBE2SQ16763 222 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 CCDC62Q6P9F0 684 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 FAM133AQ8N9E0 248 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 GABPB2Q8TAK5 448 aaPredicted RBP12.31□□□□□ -0.44
RPGR-203ENST00000378505 CLIC2O15247 247 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 GDF11O95390 407 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 ZNF131P52739 623 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 POLGP54098 1239 aaPredicted RBP12.31□□□□□ -0.44
RPGR-203ENST00000378505 SYDE2Q5VT97 1194 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 UNC13DQ70J99 1090 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 ARHGAP24Q8N264 748 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 ACCSQ96QU6 501 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 PARVGQ9HBI0 331 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 DAAM1Q9Y4D1 1078 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms