RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ARHGEF2Q92974 986 aaKnown RBP9.58□□□□□ -0.88
PCDH9-202ENST00000377865 PNPLA7Q6ZV29 1317 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 TTC26A0AVF1 554 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 GAP43P17677 238 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 CYP27A1Q02318 531 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 RNASELQ05823 741 aaKnown RBP9.58□□□□□ -0.88
PCDH9-202ENST00000377865 MUM1Q2TAK8 710 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 ASPRV1Q53RT3 343 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 GBP7Q8N8V2 638 aaPredicted RBP9.58□□□□□ -0.88
PCDH9-202ENST00000377865 NEK9Q8TD19 979 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 PCDHB13Q9Y5F0 798 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 ERCC3P19447 782 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 IL6STP40189 918 aaPredicted RBP9.58□□□□□ -0.88
PCDH9-202ENST00000377865 DHX9Q08211 1270 aaKnown RBP9.58□□□□□ -0.88
PCDH9-202ENST00000377865 FBXL16Q8N461 479 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 MGARPQ8TDB4 240 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 PSMD1Q99460 953 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 TXLNGQ9NUQ3 528 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 PVALEFA0A1B0GWK0 134 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 IL9RQ01113 521 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 WDR78Q5VTH9 848 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 RAD9BQ6WBX8 426 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 CCDC110Q8TBZ0 833 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 OXER1Q8TDS5 423 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 MICAL1Q8TDZ2 1067 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 TBC1D22AQ8WUA7 517 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 ACSBG1Q96GR2 724 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 IWS1Q96ST2 819 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 SNX12Q9UMY4 172 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 NOVA2Q9UNW9 492 aaKnown RBP9.58□□□□□ -0.88
PCDH9-202ENST00000377865 CTNND1O60716 968 aaKnown RBP9.57□□□□□ -0.88
PCDH9-202ENST00000377865 PLEKHA8P1O95397 391 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 GUCY2CP25092 1073 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 PHBP35232 272 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 CCNI2Q6ZMN8 369 aaPredicted RBP9.57□□□□□ -0.88
PCDH9-202ENST00000377865 PLA2G12BQ9BX93 195 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 EPN3Q9H201 632 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 SPATS2LQ9NUQ6 558 aaKnown RBP9.57□□□□□ -0.88
PCDH9-202ENST00000377865 HPSEQ9Y251 543 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 A0A1W2PQJ5 194 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 GMNCA6NCL1 334 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 GYG1P46976 350 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 MAPKAPK5Q8IW41 473 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 ATF2P15336 505 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 ITIH3Q06033 890 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 ST3GAL1Q11201 340 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 RASGRF1Q13972 1273 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 CCDC93Q567U6 631 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 BEND6Q5SZJ8 279 aaPredicted RBP9.57□□□□□ -0.88
PCDH9-202ENST00000377865 TBC1D31Q96DN5 1066 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 FMO2Q99518 471 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 ZMYND12Q9H0C1 365 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 VCX3BQ9H321 246 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 HDAC6Q9UBN7 1215 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 I3L4J1 428 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 THAP12O43422 761 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 PALMO75781 387 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 KRT15P19012 456 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 PPP2R2AP63151 447 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 PLS1Q14651 629 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 E2F4Q16254 413 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 PPP1R21Q6ZMI0 780 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 GSPT2Q8IYD1 628 aaKnown RBP9.57□□□□□ -0.88
PCDH9-202ENST00000377865 MMGT1Q8N4V1 131 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 FAM133AQ8N9E0 248 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 TTLL11Q8NHH1 800 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 TRIM49BA6NDI0 452 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 ABCB4P21439 1286 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 RFX5P48382 616 aaPredicted RBP9.57□□□□□ -0.88
PCDH9-202ENST00000377865 SLC20A2Q08357 652 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 PHLDB3Q6NSJ2 640 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 ARHGEF18Q6ZSZ5 1173 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 MMS19Q96T76 1030 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 HINFPQ9BQA5 517 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 PSTPIP2Q9H939 334 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 TFCP2L1Q9NZI6 479 aa9.57□□□□□ -0.88
PCDH9-202ENST00000377865 RTCBQ9Y3I0 505 aaKnown RBP9.57□□□□□ -0.88
PCDH9-202ENST00000377865 MEFVO15553 781 aaPredicted RBP9.56□□□□□ -0.88
PCDH9-202ENST00000377865 DR1Q01658 176 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 AP1ARQ63HQ0 302 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 VPS52Q8N1B4 723 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 TUBB6Q9BUF5 446 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 TAF1DQ9H5J8 278 aaPredicted RBP9.56□□□□□ -0.88
PCDH9-202ENST00000377865 YY1AP1Q9H869 796 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 LRRD1A4D1F6 860 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 SRGNP10124 158 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 NR2F2P24468 414 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 IRX4P78413 519 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 ARHGAP44Q17R89 818 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 LGSNQ5TDP6 509 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 PARP9Q8IXQ6 854 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 ISCA1Q9BUE6 129 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 PHF20Q9BVI0 1012 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 AGXT2Q9BYV1 514 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 SH2D4AQ9H788 454 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 LARSQ9P2J5 1176 aaKnown RBP9.56□□□□□ -0.88
PCDH9-202ENST00000377865 AGTPBP1Q9UPW5 1226 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 ATP8A1Q9Y2Q0 1164 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 CFAP73A6NFT4 308 aa9.56□□□□□ -0.88
PCDH9-202ENST00000377865 LRRC53A6NM62 1247 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms