RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 LRRC4BQ9NT99 713 aa20.12■□□□□ 0.81
SF1-203ENST00000377387 PSD3Q9NYI0 1048 aa20.12■□□□□ 0.81
SF1-203ENST00000377387 HPCAL4Q9UM19 191 aa20.12■□□□□ 0.81
SF1-203ENST00000377387 ROBO3Q96MS0 1386 aa20.12■□□□□ 0.81
SF1-203ENST00000377387 COL5A3P25940 1745 aaPredicted RBP20.12■□□□□ 0.81
SF1-203ENST00000377387 RREB1Q92766 1687 aa20.12■□□□□ 0.81
SF1-203ENST00000377387 SNED1Q8TER0 1413 aa20.12■□□□□ 0.81
SF1-203ENST00000377387 TACC1O75410 805 aa20.12■□□□□ 0.81
SF1-203ENST00000377387 PDHBP11177 359 aa20.12■□□□□ 0.81
SF1-203ENST00000377387 GGCXP38435 758 aa20.12■□□□□ 0.81
SF1-203ENST00000377387 ECM1Q16610 540 aa20.12■□□□□ 0.81
SF1-203ENST00000377387 TMEM266Q2M3C6 531 aa20.12■□□□□ 0.81
SF1-203ENST00000377387 TTBK2Q6IQ55 1244 aa20.12■□□□□ 0.81
SF1-203ENST00000377387 NELFCDQ8IXH7 590 aa20.12■□□□□ 0.81
SF1-203ENST00000377387 GOLGA6L1Q8N7Z2 621 aa20.12■□□□□ 0.81
SF1-203ENST00000377387 PLAGL2Q9UPG8 496 aa20.12■□□□□ 0.81
SF1-203ENST00000377387 C6orf229H3BNL8 230 aa20.11■□□□□ 0.81
SF1-203ENST00000377387 TUBBP07437 444 aa20.11■□□□□ 0.81
SF1-203ENST00000377387 ADCY7P51828 1080 aa20.11■□□□□ 0.81
SF1-203ENST00000377387 RASSF7Q02833 373 aa20.11■□□□□ 0.81
SF1-203ENST00000377387 MAP9Q49MG5 647 aa20.11■□□□□ 0.81
SF1-203ENST00000377387 SELENOOQ9BVL4 669 aa20.11■□□□□ 0.81
SF1-203ENST00000377387 DMGDHQ9UI17 866 aaKnown RBP20.11■□□□□ 0.81
SF1-203ENST00000377387 SALL4Q9UJQ4 1053 aa20.11■□□□□ 0.81
SF1-203ENST00000377387 SIK3Q9Y2K2 1263 aa20.11■□□□□ 0.81
SF1-203ENST00000377387 RIMBP2O15034 1052 aa20.11■□□□□ 0.81
SF1-203ENST00000377387 MAGEA1P43355 309 aa20.11■□□□□ 0.81
SF1-203ENST00000377387 KRT79Q5XKE5 535 aa20.11■□□□□ 0.81
SF1-203ENST00000377387 DPP8Q6V1X1 898 aaPredicted RBP20.11■□□□□ 0.81
SF1-203ENST00000377387 UNC13DQ70J99 1090 aa20.11■□□□□ 0.81
SF1-203ENST00000377387 MTMR9Q96QG7 549 aa20.11■□□□□ 0.81
SF1-203ENST00000377387 EDIL3O43854 480 aa20.1■□□□□ 0.81
SF1-203ENST00000377387 MUM1L1Q5H9M0 696 aa20.1■□□□□ 0.81
SF1-203ENST00000377387 ZHX3Q9H4I2 956 aa20.1■□□□□ 0.81
SF1-203ENST00000377387 RABEP2Q9H5N1 569 aa20.1■□□□□ 0.81
SF1-203ENST00000377387 CWC15Q9P013 229 aaKnown RBP20.1■□□□□ 0.81
SF1-203ENST00000377387 GPR75-ASB3A0A0A6YYF3 556 aa20.1■□□□□ 0.81
SF1-203ENST00000377387 TRAF5O00463 557 aa20.1■□□□□ 0.81
SF1-203ENST00000377387 AKR1B1P15121 316 aa20.1■□□□□ 0.81
SF1-203ENST00000377387 RHBDL3P58872 404 aa20.1■□□□□ 0.81
SF1-203ENST00000377387 VPS72Q15906 364 aa20.1■□□□□ 0.81
SF1-203ENST00000377387 TRAPPC3LQ5T215 181 aa20.1■□□□□ 0.81
SF1-203ENST00000377387 CCNI2Q6ZMN8 369 aaPredicted RBP20.1■□□□□ 0.81
SF1-203ENST00000377387 CREG2Q8IUH2 290 aa20.1■□□□□ 0.81
SF1-203ENST00000377387 RSPH14Q9UHP6 348 aa20.1■□□□□ 0.81
SF1-203ENST00000377387 SNX12Q9UMY4 172 aa20.1■□□□□ 0.81
SF1-203ENST00000377387 TOM1O60784 492 aa20.09■□□□□ 0.81
SF1-203ENST00000377387 MAN2A1Q16706 1144 aa20.09■□□□□ 0.81
SF1-203ENST00000377387 SH2D4AQ9H788 454 aa20.09■□□□□ 0.81
SF1-203ENST00000377387 MYH1P12882 1939 aa20.09■□□□□ 0.81
SF1-203ENST00000377387 RNASE9P60153 205 aaKnown RBP20.09■□□□□ 0.81
SF1-203ENST00000377387 GTF2IP78347 998 aa20.09■□□□□ 0.81
SF1-203ENST00000377387 CCDC40Q4G0X9 1142 aa20.09■□□□□ 0.81
SF1-203ENST00000377387 CCDC181Q5TID7 509 aa20.09■□□□□ 0.81
SF1-203ENST00000377387 SND1Q7KZF4 910 aaKnown RBP eCLIP20.09■□□□□ 0.81
SF1-203ENST00000377387 TRIM58Q8NG06 486 aa20.09■□□□□ 0.81
SF1-203ENST00000377387 RAD54LQ92698 747 aa20.09■□□□□ 0.81
SF1-203ENST00000377387 FGFBP2Q9BYJ0 223 aa20.09■□□□□ 0.81
SF1-203ENST00000377387 JRKLQ9Y4A0 524 aa20.09■□□□□ 0.81
SF1-203ENST00000377387 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.09■□□□□ 0.81
SF1-203ENST00000377387 NPHP3-ACAD11A0A0J9YXS1 232 aa20.09■□□□□ 0.81
SF1-203ENST00000377387 TULP2O00295 520 aa20.09■□□□□ 0.81
SF1-203ENST00000377387 MS4A14Q96JA4 679 aa20.09■□□□□ 0.81
SF1-203ENST00000377387 PURBQ96QR8 312 aaKnown RBP20.09■□□□□ 0.81
SF1-203ENST00000377387 MED4Q9NPJ6 270 aa20.09■□□□□ 0.81
SF1-203ENST00000377387 GGA1Q9UJY5 639 aa20.09■□□□□ 0.81
SF1-203ENST00000377387 MPHOSPH10O00566 681 aaKnown RBP20.08■□□□□ 0.81
SF1-203ENST00000377387 RC3H1Q5TC82 1133 aaKnown RBP20.08■□□□□ 0.81
SF1-203ENST00000377387 AFAP1L1Q8TED9 768 aa20.08■□□□□ 0.81
SF1-203ENST00000377387 A0A1W2PQJ5 194 aa20.08■□□□□ 0.8
SF1-203ENST00000377387 ANO9A1A5B4 782 aa20.08■□□□□ 0.8
SF1-203ENST00000377387 SLC1A4P43007 532 aa20.08■□□□□ 0.8
SF1-203ENST00000377387 KCTD1Q719H9 257 aa20.08■□□□□ 0.8
SF1-203ENST00000377387 TSGA10Q9BZW7 698 aa20.08■□□□□ 0.8
SF1-203ENST00000377387 RIOX1Q9H6W3 641 aa20.08■□□□□ 0.8
SF1-203ENST00000377387 MCM3P25205 808 aa20.07■□□□□ 0.8
SF1-203ENST00000377387 OSBPL9Q96SU4 736 aa20.07■□□□□ 0.8
SF1-203ENST00000377387 MXD3Q9BW11 206 aa20.07■□□□□ 0.8
SF1-203ENST00000377387 TMEM51Q9NW97 253 aa20.07■□□□□ 0.8
SF1-203ENST00000377387 MTMR4Q9NYA4 1195 aa20.07■□□□□ 0.8
SF1-203ENST00000377387 E9PMD0 336 aa20.07■□□□□ 0.8
SF1-203ENST00000377387 FIGNQ5HY92 759 aa20.07■□□□□ 0.8
SF1-203ENST00000377387 CCDC70Q6NSX1 233 aa20.07■□□□□ 0.8
SF1-203ENST00000377387 GUF1Q8N442 669 aaKnown RBP20.07■□□□□ 0.8
SF1-203ENST00000377387 SPATA4Q8NEY3 305 aa20.07■□□□□ 0.8
SF1-203ENST00000377387 RPGRIP1Q96KN7 1286 aa20.07■□□□□ 0.8
SF1-203ENST00000377387 FEZ2Q9UHY8 353 aaPredicted RBP20.07■□□□□ 0.8
SF1-203ENST00000377387 TNRC6CQ9HCJ0 1690 aaKnown RBP20.07■□□□□ 0.8
SF1-203ENST00000377387 MYO1CO00159 1063 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 PPP1R2P41236 205 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 DNAJC21Q5F1R6 531 aaKnown RBP20.06■□□□□ 0.8
SF1-203ENST00000377387 PRR5LQ6MZQ0 368 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 LRRC31Q6UY01 552 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 ZNF662Q6ZS27 426 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 ADGRF4Q8IZF3 695 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 MTMR8Q96EF0 704 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 RAB34Q9BZG1 259 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 STK17AQ9UEE5 414 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 POLLQ9UGP5 575 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 DDX25Q9UHL0 483 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms