RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 ZNF697Q5TEC3 545 aa19.81■□□□□ 0.76
USP11-202ENST00000377078 NFRKBQ6P4R8 1299 aa19.81■□□□□ 0.76
USP11-202ENST00000377078 AFG1LQ8WV93 481 aa19.81■□□□□ 0.76
USP11-202ENST00000377078 MTIF3Q9H2K0 278 aaKnown RBP19.81■□□□□ 0.76
USP11-202ENST00000377078 DDX41Q9UJV9 622 aaKnown RBP19.81■□□□□ 0.76
USP11-202ENST00000377078 BAZ2BQ9UIF8 2168 aaKnown RBP19.81■□□□□ 0.76
USP11-202ENST00000377078 HMGB1P09429 215 aaKnown RBP19.8■□□□□ 0.76
USP11-202ENST00000377078 CSF2RAP15509 400 aa19.8■□□□□ 0.76
USP11-202ENST00000377078 CYP2C18P33260 490 aa19.8■□□□□ 0.76
USP11-202ENST00000377078 EPHB4P54760 987 aa19.8■□□□□ 0.76
USP11-202ENST00000377078 ARHGAP1Q07960 439 aa19.8■□□□□ 0.76
USP11-202ENST00000377078 PGM5Q15124 567 aa19.8■□□□□ 0.76
USP11-202ENST00000377078 DGKDQ16760 1214 aa19.8■□□□□ 0.76
USP11-202ENST00000377078 NBPF20Q3BBV1 942 aa19.8■□□□□ 0.76
USP11-202ENST00000377078 GNPTABQ3T906 1256 aa19.8■□□□□ 0.76
USP11-202ENST00000377078 Q7L0L9 218 aa19.8■□□□□ 0.76
USP11-202ENST00000377078 VSIG10LQ86VR7 867 aa19.8■□□□□ 0.76
USP11-202ENST00000377078 SGMS1Q86VZ5 419 aa19.8■□□□□ 0.76
USP11-202ENST00000377078 EMID1Q96A84 441 aaPredicted RBP19.8■□□□□ 0.76
USP11-202ENST00000377078 LRRC2Q9BYS8 371 aa19.8■□□□□ 0.76
USP11-202ENST00000377078 NOD1Q9Y239 953 aa19.8■□□□□ 0.76
USP11-202ENST00000377078 STAM2O75886 525 aa19.79■□□□□ 0.76
USP11-202ENST00000377078 MMP3P08254 477 aa19.79■□□□□ 0.76
USP11-202ENST00000377078 TGFB3P10600 412 aa19.79■□□□□ 0.76
USP11-202ENST00000377078 CHMP4BP1P59074 171 aa19.79■□□□□ 0.76
USP11-202ENST00000377078 FGD1P98174 961 aa19.79■□□□□ 0.76
USP11-202ENST00000377078 DHX32Q7L7V1 743 aaKnown RBP19.79■□□□□ 0.76
USP11-202ENST00000377078 MICU3Q86XE3 530 aa19.79■□□□□ 0.76
USP11-202ENST00000377078 DHX37Q8IY37 1157 aaKnown RBP19.79■□□□□ 0.76
USP11-202ENST00000377078 FANCBQ8NB91 859 aa19.79■□□□□ 0.76
USP11-202ENST00000377078 SMARCC2Q8TAQ2 1214 aa19.79■□□□□ 0.76
USP11-202ENST00000377078 NOC4LQ9BVI4 516 aaKnown RBP19.79■□□□□ 0.76
USP11-202ENST00000377078 KATNAL1Q9BW62 490 aa19.79■□□□□ 0.76
USP11-202ENST00000377078 IL23AQ9NPF7 189 aa19.79■□□□□ 0.76
USP11-202ENST00000377078 PLEKHA8P1O95397 391 aa19.78■□□□□ 0.76
USP11-202ENST00000377078 RXRAP19793 462 aa19.78■□□□□ 0.76
USP11-202ENST00000377078 TSGA10IPQ3SY00 556 aa19.78■□□□□ 0.76
USP11-202ENST00000377078 RPUSD2Q8IZ73 545 aaKnown RBP19.78■□□□□ 0.76
USP11-202ENST00000377078 SRBD1Q8N5C6 995 aaKnown RBP19.78■□□□□ 0.76
USP11-202ENST00000377078 PPTC7Q8NI37 304 aa19.78■□□□□ 0.76
USP11-202ENST00000377078 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.78■□□□□ 0.762e-7■□□□□ 10.8
USP11-202ENST00000377078 TRMT13Q9NUP7 481 aaKnown RBP19.78■□□□□ 0.76
USP11-202ENST00000377078 RBM28Q9NW13 759 aaKnown RBP19.78■□□□□ 0.76
USP11-202ENST00000377078 MTMR10Q9NXD2 777 aa19.78■□□□□ 0.76
USP11-202ENST00000377078 KIAA1217Q5T5P2 1943 aa19.78■□□□□ 0.76
USP11-202ENST00000377078 TMTC3Q6ZXV5 915 aa19.77■□□□□ 0.76
USP11-202ENST00000377078 SCN10AQ9Y5Y9 1956 aa19.76■□□□□ 0.75
USP11-202ENST00000377078 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.76■□□□□ 0.75
USP11-202ENST00000377078 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.76■□□□□ 0.75
USP11-202ENST00000377078 PIK3CDO00329 1044 aa19.76■□□□□ 0.75
USP11-202ENST00000377078 ZBTB43O43298 467 aa19.76■□□□□ 0.75
USP11-202ENST00000377078 REC8O95072 547 aa19.76■□□□□ 0.75
USP11-202ENST00000377078 CCL23P55773 120 aa19.76■□□□□ 0.75
USP11-202ENST00000377078 TMEM240Q5SV17 173 aa19.76■□□□□ 0.75
USP11-202ENST00000377078 XRRA1Q6P2D8 792 aa19.76■□□□□ 0.75
USP11-202ENST00000377078 APOA5Q6Q788 366 aa19.76■□□□□ 0.75
USP11-202ENST00000377078 CCDC82Q8N4S0 544 aa19.76■□□□□ 0.75
USP11-202ENST00000377078 STXBP5LQ9Y2K9 1186 aa19.76■□□□□ 0.75
USP11-202ENST00000377078 TMEM265A0A087WTH1 108 aa19.75■□□□□ 0.75
USP11-202ENST00000377078 GGPS1O95749 300 aa19.75■□□□□ 0.75
USP11-202ENST00000377078 FGBP02675 491 aa19.75■□□□□ 0.75
USP11-202ENST00000377078 PFKMP08237 780 aa19.75■□□□□ 0.75
USP11-202ENST00000377078 ACRP10323 421 aa19.75■□□□□ 0.75
USP11-202ENST00000377078 CYP2C9P11712 490 aa19.75■□□□□ 0.75
USP11-202ENST00000377078 BFSP2Q13515 415 aa19.75■□□□□ 0.75
USP11-202ENST00000377078 CELF3Q5SZQ8 465 aaKnown RBP19.75■□□□□ 0.75
USP11-202ENST00000377078 ZNF365Q70YC5 407 aa19.75■□□□□ 0.75
USP11-202ENST00000377078 RAB11FIP4Q86YS3 637 aa19.75■□□□□ 0.75
USP11-202ENST00000377078 CMTR1Q8N1G2 835 aaKnown RBP19.75■□□□□ 0.75
USP11-202ENST00000377078 CCDC155Q8N6L0 562 aa19.75■□□□□ 0.75
USP11-202ENST00000377078 RETREG2Q8NC44 543 aa19.75■□□□□ 0.75
USP11-202ENST00000377078 IL31RAQ8NI17 732 aa19.75■□□□□ 0.75
USP11-202ENST00000377078 SPATA33Q96N06 139 aa19.75■□□□□ 0.75
USP11-202ENST00000377078 PSTPIP2Q9H939 334 aa19.75■□□□□ 0.75
USP11-202ENST00000377078 MLXIPQ9HAP2 919 aa19.75■□□□□ 0.75
USP11-202ENST00000377078 FRMPD4Q14CM0 1322 aa19.75■□□□□ 0.75
USP11-202ENST00000377078 PITPNM1O00562 1244 aa19.74■□□□□ 0.75
USP11-202ENST00000377078 PPFIA4O75335 1185 aa19.74■□□□□ 0.75
USP11-202ENST00000377078 EXOSC10Q01780 885 aaKnown RBP19.74■□□□□ 0.75
USP11-202ENST00000377078 COL9A3Q14050 684 aaPredicted RBP19.74■□□□□ 0.75
USP11-202ENST00000377078 RTN1Q16799 776 aa19.74■□□□□ 0.75
USP11-202ENST00000377078 MYSM1Q5VVJ2 828 aa19.74■□□□□ 0.75
USP11-202ENST00000377078 HEATR3Q7Z4Q2 680 aa19.74■□□□□ 0.75
USP11-202ENST00000377078 SESTD1Q86VW0 696 aa19.74■□□□□ 0.75
USP11-202ENST00000377078 RASEFQ8IZ41 740 aa19.74■□□□□ 0.75
USP11-202ENST00000377078 C7orf31Q8N865 590 aa19.74■□□□□ 0.75
USP11-202ENST00000377078 FAM161BQ96MY7 647 aa19.74■□□□□ 0.75
USP11-202ENST00000377078 NAP1L2Q9ULW6 460 aaPredicted RBP19.74■□□□□ 0.75
USP11-202ENST00000377078 UMODL1Q5DID0 1318 aa19.74■□□□□ 0.75
USP11-202ENST00000377078 NOP56O00567 594 aaKnown RBP19.73■□□□□ 0.75
USP11-202ENST00000377078 FIBPO43427 364 aa19.73■□□□□ 0.75
USP11-202ENST00000377078 RGS20O76081 388 aa19.73■□□□□ 0.75
USP11-202ENST00000377078 UBA1P22314 1058 aaKnown RBP19.73■□□□□ 0.75
USP11-202ENST00000377078 RFC2P35250 354 aa19.73■□□□□ 0.75
USP11-202ENST00000377078 NEDD9Q14511 834 aa19.73■□□□□ 0.75
USP11-202ENST00000377078 PTGISQ16647 500 aa19.73■□□□□ 0.75
USP11-202ENST00000377078 ADCK5Q3MIX3 580 aa19.73■□□□□ 0.75
USP11-202ENST00000377078 PCNX4Q63HM2 1172 aa19.73■□□□□ 0.75
USP11-202ENST00000377078 USP17L6PQ6QN14 398 aa19.73■□□□□ 0.75
USP11-202ENST00000377078 C16orf59Q7L2K0 433 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms