RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 SEC23AQ15436 765 aa17.12■□□□□ 0.33
HDAC6-204ENST00000376643 TMEM67Q5HYA8 995 aa17.12■□□□□ 0.33
HDAC6-204ENST00000376643 DEFB128Q7Z7B8 93 aa17.12■□□□□ 0.33
HDAC6-204ENST00000376643 DHX37Q8IY37 1157 aaKnown RBP17.12■□□□□ 0.33
HDAC6-204ENST00000376643 C7orf31Q8N865 590 aa17.12■□□□□ 0.33
HDAC6-204ENST00000376643 IL27Q8NEV9 243 aa17.12■□□□□ 0.33
HDAC6-204ENST00000376643 PPTC7Q8NI37 304 aa17.12■□□□□ 0.33
HDAC6-204ENST00000376643 ATXN2LQ8WWM7 1075 aaKnown RBP17.12■□□□□ 0.33
HDAC6-204ENST00000376643 MTMR8Q96EF0 704 aa17.12■□□□□ 0.33
HDAC6-204ENST00000376643 NKX2-4Q9H2Z4 354 aa17.12■□□□□ 0.33
HDAC6-204ENST00000376643 PALM3A6NDB9 673 aaPredicted RBP17.11■□□□□ 0.33
HDAC6-204ENST00000376643 GCOM1H8Y6P7 765 aaPredicted RBP17.11■□□□□ 0.33
HDAC6-204ENST00000376643 EFCAB14O75071 495 aa17.11■□□□□ 0.33
HDAC6-204ENST00000376643 POLR2MP0CAP2 368 aa17.11■□□□□ 0.33
HDAC6-204ENST00000376643 KCNJ6P48051 423 aa17.11■□□□□ 0.33
HDAC6-204ENST00000376643 CHMP4BP1P59074 171 aa17.11■□□□□ 0.33
HDAC6-204ENST00000376643 ARHGAP1Q07960 439 aa17.11■□□□□ 0.33
HDAC6-204ENST00000376643 GRM4Q14833 912 aa17.11■□□□□ 0.33
HDAC6-204ENST00000376643 LY6KQ17RY6 165 aa17.11■□□□□ 0.33
HDAC6-204ENST00000376643 GNPTABQ3T906 1256 aa17.11■□□□□ 0.33
HDAC6-204ENST00000376643 CATIPQ7Z7H3 387 aa17.11■□□□□ 0.33
HDAC6-204ENST00000376643 COL20A1Q9P218 1284 aa17.11■□□□□ 0.33
HDAC6-204ENST00000376643 THEGQ9P2T0 379 aa17.11■□□□□ 0.33
HDAC6-204ENST00000376643 MAD2L2Q9UI95 211 aa17.11■□□□□ 0.33
HDAC6-204ENST00000376643 DDX41Q9UJV9 622 aaKnown RBP17.11■□□□□ 0.33
HDAC6-204ENST00000376643 PPFIA4O75335 1185 aa17.1■□□□□ 0.33
HDAC6-204ENST00000376643 STAM2O75886 525 aa17.1■□□□□ 0.33
HDAC6-204ENST00000376643 SELPP16109 830 aa17.1■□□□□ 0.33
HDAC6-204ENST00000376643 IGFBP4P22692 258 aa17.1■□□□□ 0.33
HDAC6-204ENST00000376643 CCND2P30279 289 aa17.1■□□□□ 0.33
HDAC6-204ENST00000376643 RBL2Q08999 1139 aa17.1■□□□□ 0.33
HDAC6-204ENST00000376643 STOX1Q6ZVD7 989 aa17.1■□□□□ 0.33
HDAC6-204ENST00000376643 CHST3Q7LGC8 479 aa17.1■□□□□ 0.33
HDAC6-204ENST00000376643 PDCD2LQ9BRP1 358 aa17.1■□□□□ 0.33
HDAC6-204ENST00000376643 MTA3Q9BTC8 594 aa17.1■□□□□ 0.33
HDAC6-204ENST00000376643 GTF2IRD1Q9UHL9 959 aa17.1■□□□□ 0.33
HDAC6-204ENST00000376643 PNMA6FA0A0J9YX94 578 aa17.09■□□□□ 0.33
HDAC6-204ENST00000376643 GTPBP6O43824 516 aaPredicted RBP17.09■□□□□ 0.33
HDAC6-204ENST00000376643 F2P00734 622 aa17.09■□□□□ 0.33
HDAC6-204ENST00000376643 GSPT1P15170 499 aaKnown RBP17.09■□□□□ 0.33
HDAC6-204ENST00000376643 CHMLP26374 656 aa17.09■□□□□ 0.33
HDAC6-204ENST00000376643 KIF5BP33176 963 aa17.09■□□□□ 0.33
HDAC6-204ENST00000376643 HOMER1Q86YM7 354 aa17.09■□□□□ 0.33
HDAC6-204ENST00000376643 STAG2Q8N3U4 1231 aa17.09■□□□□ 0.33
HDAC6-204ENST00000376643 TBC1D5Q92609 795 aa17.09■□□□□ 0.33
HDAC6-204ENST00000376643 MAP3K14Q99558 947 aa17.09■□□□□ 0.33
HDAC6-204ENST00000376643 RIOX1Q9H6W3 641 aa17.09■□□□□ 0.33
HDAC6-204ENST00000376643 YBX2Q9Y2T7 364 aaKnown RBP17.09■□□□□ 0.33
HDAC6-204ENST00000376643 UNC80Q8N2C7 3258 aa17.09■□□□□ 0.33
HDAC6-204ENST00000376643 MYH6P13533 1939 aa17.08■□□□□ 0.33
HDAC6-204ENST00000376643 CYP21A2P08686 494 aa17.08■□□□□ 0.32
HDAC6-204ENST00000376643 MYCLP12524 364 aaPredicted RBP17.08■□□□□ 0.32
HDAC6-204ENST00000376643 PSEN2P49810 448 aa17.08■□□□□ 0.32
HDAC6-204ENST00000376643 MFSD10Q14728 455 aa17.08■□□□□ 0.32
HDAC6-204ENST00000376643 CYB5R4Q7L1T6 521 aa17.08■□□□□ 0.32
HDAC6-204ENST00000376643 LRRC8DQ7L1W4 858 aa17.08■□□□□ 0.32
HDAC6-204ENST00000376643 VSIG10LQ86VR7 867 aa17.08■□□□□ 0.32
HDAC6-204ENST00000376643 TMTC2Q8N394 836 aa17.08■□□□□ 0.32
HDAC6-204ENST00000376643 CTCFLQ8NI51 663 aaPredicted RBP17.08■□□□□ 0.32
HDAC6-204ENST00000376643 LZTS2Q9BRK4 669 aa17.08■□□□□ 0.32
HDAC6-204ENST00000376643 SUPT16HQ9Y5B9 1047 aaKnown RBP17.08■□□□□ 0.32
HDAC6-204ENST00000376643 HOXD8P13378 290 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-204ENST00000376643 GNAQP50148 359 aa17.07■□□□□ 0.32
HDAC6-204ENST00000376643 RABGGTBP53611 331 aa17.07■□□□□ 0.32
HDAC6-204ENST00000376643 MRPS5P82675 430 aaKnown RBP17.07■□□□□ 0.32
HDAC6-204ENST00000376643 PTK7Q13308 1070 aa17.07■□□□□ 0.32
HDAC6-204ENST00000376643 PGM5Q15124 567 aa17.07■□□□□ 0.32
HDAC6-204ENST00000376643 AAK1Q2M2I8 961 aa17.07■□□□□ 0.32
HDAC6-204ENST00000376643 CELF3Q5SZQ8 465 aaKnown RBP17.07■□□□□ 0.32
HDAC6-204ENST00000376643 CNKSR3Q6P9H4 555 aa17.07■□□□□ 0.32
HDAC6-204ENST00000376643 CASC1Q6TDU7 716 aa17.07■□□□□ 0.32
HDAC6-204ENST00000376643 CUL5Q93034 780 aa17.07■□□□□ 0.32
HDAC6-204ENST00000376643 SPATA33Q96N06 139 aa17.07■□□□□ 0.32
HDAC6-204ENST00000376643 MLXIPQ9HAP2 919 aa17.07■□□□□ 0.32
HDAC6-204ENST00000376643 SEC63Q9UGP8 760 aaKnown RBP17.07■□□□□ 0.32
HDAC6-204ENST00000376643 CDH23Q9H251 3354 aa17.06■□□□□ 0.32
HDAC6-204ENST00000376643 TANC1Q9C0D5 1861 aa17.06■□□□□ 0.32
HDAC6-204ENST00000376643 EMSYQ7Z589 1322 aa17.06■□□□□ 0.32
HDAC6-204ENST00000376643 E7EWF7 191 aa17.06■□□□□ 0.32
HDAC6-204ENST00000376643 SGSM2O43147 1006 aa17.06■□□□□ 0.32
HDAC6-204ENST00000376643 DDAH1O94760 285 aa17.06■□□□□ 0.32
HDAC6-204ENST00000376643 PDE4AP27815 886 aa17.06■□□□□ 0.32
HDAC6-204ENST00000376643 SMARCA1P28370 1054 aa17.06■□□□□ 0.32
HDAC6-204ENST00000376643 TROAPQ12815 778 aa17.06■□□□□ 0.32
HDAC6-204ENST00000376643 KIAA0753Q2KHM9 967 aa17.06■□□□□ 0.32
HDAC6-204ENST00000376643 GDF6Q6KF10 455 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-204ENST00000376643 XRRA1Q6P2D8 792 aa17.06■□□□□ 0.32
HDAC6-204ENST00000376643 HERC6Q8IVU3 1022 aa17.06■□□□□ 0.32
HDAC6-204ENST00000376643 USP38Q8NB14 1042 aa17.06■□□□□ 0.32
HDAC6-204ENST00000376643 PPM1EQ8WY54 764 aa17.06■□□□□ 0.32
HDAC6-204ENST00000376643 KAT2BQ92831 832 aa17.06■□□□□ 0.32
HDAC6-204ENST00000376643 KIAA1217Q5T5P2 1943 aa17.06■□□□□ 0.32
HDAC6-204ENST00000376643 ABHD14A-ACY1A0A1B0GW23 586 aa17.05■□□□□ 0.32
HDAC6-204ENST00000376643 HAS3O00219 553 aa17.05■□□□□ 0.32
HDAC6-204ENST00000376643 NOP56O00567 594 aaKnown RBP17.05■□□□□ 0.32
HDAC6-204ENST00000376643 OPLAHO14841 1288 aa17.05■□□□□ 0.32
HDAC6-204ENST00000376643 GGPS1O95749 300 aa17.05■□□□□ 0.32
HDAC6-204ENST00000376643 CA3P07451 260 aa17.05■□□□□ 0.32
HDAC6-204ENST00000376643 NEDD9Q14511 834 aa17.05■□□□□ 0.32
HDAC6-204ENST00000376643 MYSM1Q5VVJ2 828 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms