RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 SLC30A10Q6XR72 485 aa19.95■□□□□ 0.78
PFDN6-201ENST00000374606 Q7L0L9 218 aa19.95■□□□□ 0.78
PFDN6-201ENST00000374606 FCHSD1Q86WN1 690 aa19.95■□□□□ 0.78
PFDN6-201ENST00000374606 TDHQ8IZJ6 230 aa19.95■□□□□ 0.78
PFDN6-201ENST00000374606 SHCBP1Q8NEM2 672 aa19.95■□□□□ 0.78
PFDN6-201ENST00000374606 TBC1D5Q92609 795 aa19.95■□□□□ 0.78
PFDN6-201ENST00000374606 CHAMP1Q96JM3 812 aa19.95■□□□□ 0.78
PFDN6-201ENST00000374606 MROH8Q9H579 483 aa19.95■□□□□ 0.78
PFDN6-201ENST00000374606 EHMT1Q9H9B1 1298 aa19.95■□□□□ 0.78
PFDN6-201ENST00000374606 GJD2Q9UKL4 321 aa19.95■□□□□ 0.78
PFDN6-201ENST00000374606 RPS6P62753 249 aaKnown RBP19.94■□□□□ 0.78
PFDN6-201ENST00000374606 TRIM32Q13049 653 aa19.94■□□□□ 0.78
PFDN6-201ENST00000374606 CLEC17AQ6ZS10 378 aa19.94■□□□□ 0.78
PFDN6-201ENST00000374606 TBCKQ8TEA7 893 aa19.94■□□□□ 0.78
PFDN6-201ENST00000374606 A1CFQ9NQ94 594 aaKnown RBP19.94■□□□□ 0.78
PFDN6-201ENST00000374606 CFAP45Q9UL16 551 aa19.94■□□□□ 0.78
PFDN6-201ENST00000374606 OGDHLQ9ULD0 1010 aa19.94■□□□□ 0.78
PFDN6-201ENST00000374606 PLXNB2O15031 1838 aa19.93■□□□□ 0.78
PFDN6-201ENST00000374606 ATP2B1P20020 1258 aa19.93■□□□□ 0.78
PFDN6-201ENST00000374606 Q3C1V9 767 aa19.93■□□□□ 0.78
PFDN6-201ENST00000374606 TTC38Q5R3I4 469 aa19.93■□□□□ 0.78
PFDN6-201ENST00000374606 WDR78Q5VTH9 848 aa19.93■□□□□ 0.78
PFDN6-201ENST00000374606 NEK8Q86SG6 692 aa19.93■□□□□ 0.78
PFDN6-201ENST00000374606 CCAR1Q8IX12 1150 aaKnown RBP19.93■□□□□ 0.78
PFDN6-201ENST00000374606 USP28Q96RU2 1077 aa19.93■□□□□ 0.78
PFDN6-201ENST00000374606 CNPY2Q9Y2B0 182 aa19.93■□□□□ 0.78
PFDN6-201ENST00000374606 MYH7BA7E2Y1 1941 aa19.93■□□□□ 0.78
PFDN6-201ENST00000374606 PFASO15067 1338 aa19.93■□□□□ 0.78
PFDN6-201ENST00000374606 TCHHQ07283 1943 aa19.92■□□□□ 0.78
PFDN6-201ENST00000374606 FIBPO43427 364 aa19.92■□□□□ 0.78
PFDN6-201ENST00000374606 TOB1P50616 345 aaPredicted RBP19.92■□□□□ 0.78
PFDN6-201ENST00000374606 CEBPZQ03701 1054 aaKnown RBP19.92■□□□□ 0.78
PFDN6-201ENST00000374606 BAATQ14032 418 aaPredicted RBP19.92■□□□□ 0.78
PFDN6-201ENST00000374606 ANO1Q5XXA6 986 aa19.92■□□□□ 0.78
PFDN6-201ENST00000374606 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.92■□□□□ 0.78
PFDN6-201ENST00000374606 ANKRD35Q8N283 1001 aa19.92■□□□□ 0.78
PFDN6-201ENST00000374606 SYTL5Q8TDW5 730 aaPredicted RBP19.92■□□□□ 0.78
PFDN6-201ENST00000374606 TRIB2Q92519 343 aa19.92■□□□□ 0.78
PFDN6-201ENST00000374606 FTOQ9C0B1 505 aaKnown RBP eCLIP19.92■□□□□ 0.78
PFDN6-201ENST00000374606 UBE2OQ9C0C9 1292 aaKnown RBP19.92■□□□□ 0.78
PFDN6-201ENST00000374606 MTMR10Q9NXD2 777 aa19.92■□□□□ 0.78
PFDN6-201ENST00000374606 CYP39A1Q9NYL5 469 aa19.92■□□□□ 0.78
PFDN6-201ENST00000374606 TFIP11Q9UBB9 837 aaKnown RBP19.92■□□□□ 0.78
PFDN6-201ENST00000374606 SREBF1P36956 1147 aa19.91■□□□□ 0.78
PFDN6-201ENST00000374606 NBR1Q14596 966 aa19.91■□□□□ 0.78
PFDN6-201ENST00000374606 PORCNQ9H237 461 aa19.91■□□□□ 0.78
PFDN6-201ENST00000374606 POLR3EQ9NVU0 708 aa19.91■□□□□ 0.78
PFDN6-201ENST00000374606 COL20A1Q9P218 1284 aa19.91■□□□□ 0.78
PFDN6-201ENST00000374606 LCTP09848 1927 aa19.9■□□□□ 0.78
PFDN6-201ENST00000374606 GOLGA6L22H0YM25 854 aa19.9■□□□□ 0.78
PFDN6-201ENST00000374606 PRKAR2AP13861 404 aaKnown RBP19.9■□□□□ 0.78
PFDN6-201ENST00000374606 NASPP49321 788 aaPredicted RBP19.9■□□□□ 0.78
PFDN6-201ENST00000374606 ARHGAP4P98171 946 aa19.9■□□□□ 0.78
PFDN6-201ENST00000374606 KCTD2Q14681 263 aa19.9■□□□□ 0.78
PFDN6-201ENST00000374606 CSPP1Q1MSJ5 1256 aa19.9■□□□□ 0.78
PFDN6-201ENST00000374606 LETM2Q2VYF4 491 aa19.9■□□□□ 0.78
PFDN6-201ENST00000374606 MAP3K21Q5TCX8 1036 aa19.9■□□□□ 0.78
PFDN6-201ENST00000374606 MMP19Q99542 508 aa19.9■□□□□ 0.78
PFDN6-201ENST00000374606 NAP1L4Q99733 375 aaKnown RBP19.9■□□□□ 0.78
PFDN6-201ENST00000374606 SCAND2PQ9GZW5 306 aaPredicted RBP19.9■□□□□ 0.78
PFDN6-201ENST00000374606 RTEL1Q9NZ71 1219 aa19.9■□□□□ 0.78
PFDN6-201ENST00000374606 CEP131Q9UPN4 1083 aa19.9■□□□□ 0.78
PFDN6-201ENST00000374606 PCDHB6Q9Y5E3 794 aa19.9■□□□□ 0.78
PFDN6-201ENST00000374606 CLIC4Q9Y696 253 aa19.9■□□□□ 0.78
PFDN6-201ENST00000374606 YEATS4O95619 227 aa19.89■□□□□ 0.77
PFDN6-201ENST00000374606 FCER1AP12319 257 aa19.89■□□□□ 0.77
PFDN6-201ENST00000374606 CYP2B6P20813 491 aa19.89■□□□□ 0.77
PFDN6-201ENST00000374606 MAPK4P31152 587 aa19.89■□□□□ 0.77
PFDN6-201ENST00000374606 FRMPD4Q14CM0 1322 aa19.89■□□□□ 0.77
PFDN6-201ENST00000374606 STK38Q15208 465 aa19.89■□□□□ 0.77
PFDN6-201ENST00000374606 SF3A1Q15459 793 aaKnown RBP19.89■□□□□ 0.77
PFDN6-201ENST00000374606 SOCS4Q8WXH5 440 aa19.89■□□□□ 0.77
PFDN6-201ENST00000374606 SPATA32Q96LK8 384 aa19.89■□□□□ 0.77
PFDN6-201ENST00000374606 NUDT12Q9BQG2 462 aa19.89■□□□□ 0.77
PFDN6-201ENST00000374606 GDPD2Q9HCC8 539 aa19.89■□□□□ 0.77
PFDN6-201ENST00000374606 ZNF236Q9UL36 1845 aa19.89■□□□□ 0.77
PFDN6-201ENST00000374606 IVNS1ABPQ9Y6Y0 642 aa19.89■□□□□ 0.77
PFDN6-201ENST00000374606 WNT7AO00755 349 aa19.88■□□□□ 0.77
PFDN6-201ENST00000374606 CCNT1O60563 726 aaKnown RBP19.88■□□□□ 0.77
PFDN6-201ENST00000374606 BMP15O95972 392 aa19.88■□□□□ 0.77
PFDN6-201ENST00000374606 MCM7P33993 719 aa19.88■□□□□ 0.77
PFDN6-201ENST00000374606 USP11P51784 963 aa19.88■□□□□ 0.77
PFDN6-201ENST00000374606 ORC2Q13416 577 aaPredicted RBP19.88■□□□□ 0.77
PFDN6-201ENST00000374606 TAAR1Q96RJ0 339 aa19.88■□□□□ 0.77
PFDN6-201ENST00000374606 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.88■□□□□ 0.77
PFDN6-201ENST00000374606 POTEB2H3BUK9 544 aa19.87■□□□□ 0.77
PFDN6-201ENST00000374606 XRCC5P13010 732 aaKnown RBP19.87■□□□□ 0.77
PFDN6-201ENST00000374606 GCFC2P16383 781 aaKnown RBP19.87■□□□□ 0.77
PFDN6-201ENST00000374606 ZNF174Q15697 407 aa19.87■□□□□ 0.77
PFDN6-201ENST00000374606 ARHGEF16Q5VV41 709 aa19.87■□□□□ 0.77
PFDN6-201ENST00000374606 TRMT44Q8IYL2 757 aaKnown RBP19.87■□□□□ 0.77
PFDN6-201ENST00000374606 LEO1Q8WVC0 666 aaPredicted RBP19.87■□□□□ 0.77
PFDN6-201ENST00000374606 CRYGNQ8WXF5 182 aa19.87■□□□□ 0.77
PFDN6-201ENST00000374606 RMDN3Q96TC7 470 aa19.87■□□□□ 0.77
PFDN6-201ENST00000374606 PXMP2Q9NR77 195 aa19.87■□□□□ 0.77
PFDN6-201ENST00000374606 NEMFO60524 1076 aa19.86■□□□□ 0.77
PFDN6-201ENST00000374606 TDP2O95551 362 aa19.86■□□□□ 0.77
PFDN6-201ENST00000374606 CYP3A4P08684 503 aa19.86■□□□□ 0.77
PFDN6-201ENST00000374606 COL6A1P12109 1028 aa19.86■□□□□ 0.77
PFDN6-201ENST00000374606 EIF2AK2P19525 551 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms