RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 AZI2Q9H6S1 392 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 AMOTL2Q9Y2J4 779 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.14□□□□□ -0.63
CD28-202ENST00000374481 ATP5J2-PTCD1G3V325 749 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 CCDC188H7C350 402 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 PTCD1O75127 700 aaKnown RBP11.14□□□□□ -0.63
CD28-202ENST00000374481 ACCSLQ4AC99 568 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 TRIML2Q8N7C3 387 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 ABTB2Q8N961 1025 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 CXorf38Q8TB03 319 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 AGAP11Q8TF27 550 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 GJB4Q9NTQ9 266 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 TUBE1Q9UJT0 475 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 SYNMO15061 1565 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 PDE5AO76074 875 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 RTN3O95197 1032 aaPredicted RBP11.14□□□□□ -0.63
CD28-202ENST00000374481 ACADSP16219 412 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 ITIH3Q06033 890 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 AGBL2Q5U5Z8 902 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 NANOGNBQ7Z5D8 188 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 TTLL11Q8NHH1 800 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 CUEDC2Q9H467 287 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 PNMA2Q9UL42 364 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 BZW2Q9Y6E2 419 aaKnown RBP11.14□□□□□ -0.63
CD28-202ENST00000374481 ARHGAP31Q2M1Z3 1444 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 TCP11X1B4DZS4 312 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 SPAG7O75391 227 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 PYGLP06737 847 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 VHLP40337 213 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 USP4Q13107 963 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 OLFML1Q6UWY5 402 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.14□□□□□ -0.63
CD28-202ENST00000374481 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.14□□□□□ -0.63
CD28-202ENST00000374481 ESR2Q92731 530 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 TBK1Q9UHD2 729 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 MAST1Q9Y2H9 1570 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 H2AFZP0C0S5 128 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 FMR1Q06787 632 aaKnown RBP eCLIP11.13□□□□□ -0.63
CD28-202ENST00000374481 IFIT1BQ5T764 474 aaKnown RBP11.13□□□□□ -0.63
CD28-202ENST00000374481 LMBR1LQ6UX01 489 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 PIK3AP1Q6ZUJ8 805 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 H2AFVQ71UI9 128 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 SMCR8Q8TEV9 937 aaPredicted RBP11.13□□□□□ -0.63
CD28-202ENST00000374481 ZKSCAN3Q9BRR0 538 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 NDE1Q9NXR1 346 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 TMOD2Q9NZR1 351 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 SEC63Q9UGP8 760 aaKnown RBP11.13□□□□□ -0.63
CD28-202ENST00000374481 PLXNC1O60486 1568 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 SAMD9LQ8IVG5 1584 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 FOXN1O15353 648 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 ATP6V1G1O75348 118 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 RFC5P40937 340 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 ZCWPW1Q9H0M4 648 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 PALMDQ9NP74 551 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 UTP6Q9NYH9 597 aaKnown RBP11.13□□□□□ -0.63
CD28-202ENST00000374481 GGA2Q9UJY4 613 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 TNFAIP3P21580 790 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 GJC1P36383 396 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 GCLCP48506 637 aaPredicted RBP11.13□□□□□ -0.63
CD28-202ENST00000374481 KPNB1Q14974 876 aaKnown RBP11.13□□□□□ -0.63
CD28-202ENST00000374481 DCAF17Q5H9S7 520 aaPredicted RBP11.13□□□□□ -0.63
CD28-202ENST00000374481 SV2BQ7L1I2 683 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 METTL16Q86W50 562 aaKnown RBP11.13□□□□□ -0.63
CD28-202ENST00000374481 MDM1Q8TC05 714 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 MAGEC3Q8TD91 643 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 MTRQ99707 1265 aa11.13□□□□□ -0.63
CD28-202ENST00000374481 RBM12Q9NTZ6 932 aaKnown RBP11.13□□□□□ -0.63
CD28-202ENST00000374481 SOCS7O14512 581 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 SART1O43290 800 aaKnown RBP11.12□□□□□ -0.63
CD28-202ENST00000374481 ADCY3O60266 1144 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 ZCCHC18P0CG32 403 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 HSPD1P10809 573 aaKnown RBP11.12□□□□□ -0.63
CD28-202ENST00000374481 MX2P20592 715 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 IL15P40933 162 aaPredicted RBP11.12□□□□□ -0.63
CD28-202ENST00000374481 POLR2FP61218 127 aaKnown RBP11.12□□□□□ -0.63
CD28-202ENST00000374481 C16orf87Q6PH81 154 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 MPRIPQ6WCQ1 1025 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 TGS1Q96RS0 853 aaKnown RBP11.12□□□□□ -0.63
CD28-202ENST00000374481 LSM14BQ9BX40 385 aaKnown RBP11.12□□□□□ -0.63
CD28-202ENST00000374481 VPS37BQ9H9H4 285 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 SMARCAL1Q9NZC9 954 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 VPS54Q9P1Q0 977 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 BCAP29Q9UHQ4 241 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 LZTS1Q9Y250 596 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 PALMO75781 387 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 CACNA2D1P54289 1103 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 NCAPHQ15003 741 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 DDX47Q9H0S4 455 aaKnown RBP11.12□□□□□ -0.63
CD28-202ENST00000374481 TMEM60Q9H2L4 133 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 ADD3Q9UEY8 706 aaKnown RBP11.12□□□□□ -0.63
CD28-202ENST00000374481 ZFP69BQ9UJL9 534 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 LEMD3Q9Y2U8 911 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 PLA2R1Q13018 1463 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 SASH1O94885 1247 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 ITIH4Q14624 930 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 SYT2Q8N9I0 419 aaPredicted RBP11.12□□□□□ -0.63
CD28-202ENST00000374481 IWS1Q96ST2 819 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 SPZ1Q9BXG8 430 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 LGALS16A8MUM7 142 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 UBOX5O94941 541 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms