RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 STAT3P40763 770 aa18.95■□□□□ 0.62
PTPN20-203ENST00000374342 BACE1P56817 501 aa18.95■□□□□ 0.62
PTPN20-203ENST00000374342 UBXN2AP68543 259 aa18.95■□□□□ 0.62
PTPN20-203ENST00000374342 AMPD3Q01432 767 aa18.95■□□□□ 0.62
PTPN20-203ENST00000374342 MCM6Q14566 821 aa18.95■□□□□ 0.62
PTPN20-203ENST00000374342 SPATA1Q5VX52 437 aa18.95■□□□□ 0.62
PTPN20-203ENST00000374342 C9orf131Q5VYM1 1079 aa18.95■□□□□ 0.62
PTPN20-203ENST00000374342 SV2BQ7L1I2 683 aa18.95■□□□□ 0.62
PTPN20-203ENST00000374342 CPXCR1Q8N123 301 aa18.95■□□□□ 0.62
PTPN20-203ENST00000374342 RAD54LQ92698 747 aa18.95■□□□□ 0.62
PTPN20-203ENST00000374342 CCDC47Q96A33 483 aaKnown RBP18.95■□□□□ 0.62
PTPN20-203ENST00000374342 KLRG1Q96E93 195 aa18.95■□□□□ 0.62
PTPN20-203ENST00000374342 C7orf25Q9BPX7 421 aa18.95■□□□□ 0.62
PTPN20-203ENST00000374342 SAMSN1Q9NSI8 373 aaKnown RBP18.95■□□□□ 0.62
PTPN20-203ENST00000374342 EXOC1Q9NV70 894 aa18.95■□□□□ 0.62
PTPN20-203ENST00000374342 PPP1R9AQ9ULJ8 1098 aa18.95■□□□□ 0.62
PTPN20-203ENST00000374342 PTPRFP10586 1907 aa18.95■□□□□ 0.62
PTPN20-203ENST00000374342 TBX3O15119 743 aa18.94■□□□□ 0.62
PTPN20-203ENST00000374342 CDK11BP21127 795 aaKnown RBP18.94■□□□□ 0.62
PTPN20-203ENST00000374342 LRMPQ12912 555 aa18.94■□□□□ 0.62
PTPN20-203ENST00000374342 PAK1Q13153 545 aa18.94■□□□□ 0.62
PTPN20-203ENST00000374342 SUPT20HL1Q3ZLR7 823 aa18.94■□□□□ 0.62
PTPN20-203ENST00000374342 RAVER2Q9HCJ3 691 aaKnown RBP18.94■□□□□ 0.62
PTPN20-203ENST00000374342 MAPK8IP1Q9UQF2 711 aa18.94■□□□□ 0.62
PTPN20-203ENST00000374342 CTDP1Q9Y5B0 961 aaPredicted RBP18.94■□□□□ 0.62
PTPN20-203ENST00000374342 ZHX2Q9Y6X8 837 aa18.94■□□□□ 0.62
PTPN20-203ENST00000374342 COBLO75128 1261 aa18.94■□□□□ 0.62
PTPN20-203ENST00000374342 RHOBTB3O94955 611 aa18.94■□□□□ 0.62
PTPN20-203ENST00000374342 KCNK18Q7Z418 384 aa18.94■□□□□ 0.62
PTPN20-203ENST00000374342 NELFBQ8WX92 580 aa18.94■□□□□ 0.62
PTPN20-203ENST00000374342 SLC38A10Q9HBR0 1119 aa18.94■□□□□ 0.62
PTPN20-203ENST00000374342 NFIBO00712 420 aa18.93■□□□□ 0.62
PTPN20-203ENST00000374342 MSH4O15457 936 aa18.93■□□□□ 0.62
PTPN20-203ENST00000374342 ALAS1P13196 640 aa18.93■□□□□ 0.62
PTPN20-203ENST00000374342 PRCPP42785 496 aa18.93■□□□□ 0.62
PTPN20-203ENST00000374342 HMGCS2P54868 508 aa18.93■□□□□ 0.62
PTPN20-203ENST00000374342 ECM1Q16610 540 aa18.93■□□□□ 0.62
PTPN20-203ENST00000374342 TPD52L1Q16890 204 aaPredicted RBP18.93■□□□□ 0.62
PTPN20-203ENST00000374342 NCAPH2Q6IBW4 605 aa18.93■□□□□ 0.62
PTPN20-203ENST00000374342 CYP2W1Q8TAV3 490 aa18.93■□□□□ 0.62
PTPN20-203ENST00000374342 HOMER2Q9NSB8 354 aa18.93■□□□□ 0.62
PTPN20-203ENST00000374342 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.93■□□□□ 0.62
PTPN20-203ENST00000374342 RWDD2AQ9UIY3 292 aa18.93■□□□□ 0.62
PTPN20-203ENST00000374342 PYCARDQ9ULZ3 195 aa18.93■□□□□ 0.62
PTPN20-203ENST00000374342 POTEB3A0JP26 581 aa18.92■□□□□ 0.62
PTPN20-203ENST00000374342 POTECB2RU33 542 aa18.92■□□□□ 0.62
PTPN20-203ENST00000374342 ADM5C9JUS6 153 aa18.92■□□□□ 0.62
PTPN20-203ENST00000374342 PDE4DQ08499 809 aa18.92■□□□□ 0.62
PTPN20-203ENST00000374342 ARID5BQ14865 1188 aa18.92■□□□□ 0.62
PTPN20-203ENST00000374342 POTEBQ6S5H4 581 aa18.92■□□□□ 0.62
PTPN20-203ENST00000374342 DLK2Q6UY11 383 aa18.92■□□□□ 0.62
PTPN20-203ENST00000374342 CACTINQ8WUQ7 758 aaKnown RBP18.92■□□□□ 0.62
PTPN20-203ENST00000374342 FAM20AQ96MK3 541 aa18.92■□□□□ 0.62
PTPN20-203ENST00000374342 NAP1L5Q96NT1 182 aaPredicted RBP18.92■□□□□ 0.62
PTPN20-203ENST00000374342 NT5C3AQ9H0P0 336 aa18.92■□□□□ 0.62
PTPN20-203ENST00000374342 IGLV3-22A0A075B6J6 115 aa18.92■□□□□ 0.62
PTPN20-203ENST00000374342 MYMKA6NI61 221 aa18.92■□□□□ 0.62
PTPN20-203ENST00000374342 HSD17B4P51659 736 aa18.92■□□□□ 0.62
PTPN20-203ENST00000374342 SPIRE1Q08AE8 756 aa18.92■□□□□ 0.62
PTPN20-203ENST00000374342 NOL9Q5SY16 702 aaKnown RBP18.92■□□□□ 0.62
PTPN20-203ENST00000374342 HYIQ5T013 277 aa18.92■□□□□ 0.62
PTPN20-203ENST00000374342 HAUS3Q68CZ6 603 aa18.92■□□□□ 0.62
PTPN20-203ENST00000374342 C17orf53Q8N3J3 647 aaPredicted RBP18.92■□□□□ 0.62
PTPN20-203ENST00000374342 DCPSQ96C86 337 aaKnown RBP18.92■□□□□ 0.62
PTPN20-203ENST00000374342 ZBED4O75132 1171 aa18.91■□□□□ 0.62
PTPN20-203ENST00000374342 SEMA3FQ13275 785 aa18.91■□□□□ 0.62
PTPN20-203ENST00000374342 STIM1Q13586 685 aa18.91■□□□□ 0.62
PTPN20-203ENST00000374342 ADSSL1Q8N142 457 aa18.91■□□□□ 0.62
PTPN20-203ENST00000374342 GIMAP8Q8ND71 665 aaPredicted RBP18.91■□□□□ 0.62
PTPN20-203ENST00000374342 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.91■□□□□ 0.62
PTPN20-203ENST00000374342 CLEC4DQ8WXI8 215 aa18.91■□□□□ 0.62
PTPN20-203ENST00000374342 ATG4CQ96DT6 458 aa18.91■□□□□ 0.62
PTPN20-203ENST00000374342 INTS13Q9NVM9 706 aa18.91■□□□□ 0.62
PTPN20-203ENST00000374342 IMPACTQ9P2X3 320 aa18.91■□□□□ 0.62
PTPN20-203ENST00000374342 GSDMDP57764 484 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 MUM1L1Q5H9M0 696 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 CDKAL1Q5VV42 579 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 DYMQ7RTS9 669 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 SULF1Q8IWU6 871 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 ERMNQ8TAM6 284 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 C12orf42Q96LP6 360 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 VAV3Q9UKW4 847 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 KIAA1024Q9UPX6 916 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 SLC26A4O43511 780 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 MED24O75448 989 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 SSBP05455 408 aaKnown RBP eCLIP18.9■□□□□ 0.62
PTPN20-203ENST00000374342 PTPN21Q16825 1174 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 MCF2L2Q86YR7 1114 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 LRRC8AQ8IWT6 810 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 WNK4Q96J92 1243 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 LRRC27Q9C0I9 530 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 COL20A1Q9P218 1284 aa18.9■□□□□ 0.62
PTPN20-203ENST00000374342 POTEFA5A3E0 1075 aa18.89■□□□□ 0.61
PTPN20-203ENST00000374342 TRIM49BA6NDI0 452 aa18.89■□□□□ 0.61
PTPN20-203ENST00000374342 E9PMD0 336 aa18.89■□□□□ 0.61
PTPN20-203ENST00000374342 VWA5AO00534 786 aa18.89■□□□□ 0.61
PTPN20-203ENST00000374342 PSMA7O14818 248 aa18.89■□□□□ 0.61
PTPN20-203ENST00000374342 USP2O75604 605 aaPredicted RBP18.89■□□□□ 0.61
PTPN20-203ENST00000374342 POTEIP0CG38 1075 aa18.89■□□□□ 0.61
PTPN20-203ENST00000374342 POTEGQ6S5H5 508 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms