RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 CCNA1P78396 465 aa10.96□□□□□ -0.65
PTPN20-202ENST00000374339 SETQ01105 290 aaPredicted RBP10.96□□□□□ -0.65
PTPN20-202ENST00000374339 GRIN1Q05586 938 aa10.96□□□□□ -0.65
PTPN20-202ENST00000374339 FSTL1Q12841 308 aa10.96□□□□□ -0.65
PTPN20-202ENST00000374339 PCNX4Q63HM2 1172 aa10.96□□□□□ -0.65
PTPN20-202ENST00000374339 KANK3Q6NY19 840 aa10.96□□□□□ -0.65
PTPN20-202ENST00000374339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.96□□□□□ -0.65
PTPN20-202ENST00000374339 RASAL3Q86YV0 1011 aa10.96□□□□□ -0.65
PTPN20-202ENST00000374339 SYTL5Q8TDW5 730 aaPredicted RBP10.96□□□□□ -0.65
PTPN20-202ENST00000374339 BRI3BPQ8WY22 251 aa10.96□□□□□ -0.65
PTPN20-202ENST00000374339 CCDC102AQ96A19 550 aa10.96□□□□□ -0.65
PTPN20-202ENST00000374339 HHIPL1Q96JK4 782 aa10.96□□□□□ -0.65
PTPN20-202ENST00000374339 FAM20AQ96MK3 541 aa10.96□□□□□ -0.65
PTPN20-202ENST00000374339 PARK7Q99497 189 aaKnown RBP10.96□□□□□ -0.65
PTPN20-202ENST00000374339 SDF4Q9BRK5 362 aa10.96□□□□□ -0.65
PTPN20-202ENST00000374339 MROH8Q9H579 483 aa10.96□□□□□ -0.65
PTPN20-202ENST00000374339 KCNMB3Q9NPA1 279 aa10.96□□□□□ -0.65
PTPN20-202ENST00000374339 PLSCR2Q9NRY7 297 aa10.96□□□□□ -0.65
PTPN20-202ENST00000374339 BTBD7Q9P203 1132 aa10.96□□□□□ -0.65
PTPN20-202ENST00000374339 TLL2Q9Y6L7 1015 aa10.96□□□□□ -0.65
PTPN20-202ENST00000374339 TESPA1A2RU30 521 aaPredicted RBP10.95□□□□□ -0.66
PTPN20-202ENST00000374339 BTBD19C9JJ37 291 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 EDIL3O43854 480 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 UBA7P41226 1012 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 TXKP42681 527 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 ZNF445P59923 1031 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 MKRN3Q13064 507 aaKnown RBP10.95□□□□□ -0.66
PTPN20-202ENST00000374339 BAATQ14032 418 aaPredicted RBP10.95□□□□□ -0.66
PTPN20-202ENST00000374339 GSE1Q14687 1217 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 CEP55Q53EZ4 464 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 PRR16Q569H4 304 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 SPECC1Q5M775 1068 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 SLC30A10Q6XR72 485 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 NIPA1Q7RTP0 329 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 ELOA2Q8IYF1 753 aaPredicted RBP10.95□□□□□ -0.66
PTPN20-202ENST00000374339 ANKRD35Q8N283 1001 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 IGSF22Q8N9C0 903 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 SHCBP1Q8NEM2 672 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 DNERQ8NFT8 737 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 NSUN6Q8TEA1 469 aaKnown RBP10.95□□□□□ -0.66
PTPN20-202ENST00000374339 SYMPKQ92797 1274 aaKnown RBP10.95□□□□□ -0.66
PTPN20-202ENST00000374339 RMDN3Q96TC7 470 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 TTC12Q9H892 705 aaPredicted RBP10.95□□□□□ -0.66
PTPN20-202ENST00000374339 CYP39A1Q9NYL5 469 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 PCDHA12Q9UN75 941 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 STK24Q9Y6E0 443 aa10.95□□□□□ -0.66
PTPN20-202ENST00000374339 SYCE3A1L190 88 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 TMEM88BA6NKF7 163 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 B4DLN1 442 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 FAM86B1E9PN63 330 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 POLR2DO15514 142 aaKnown RBP10.94□□□□□ -0.66
PTPN20-202ENST00000374339 SLC26A4O43511 780 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 CNMDO75829 334 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 STAM2O75886 525 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 SLC10A3P09131 477 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 FAM86B2P0C5J1 330 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 BCRP11274 1271 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 CCND2P30279 289 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 TECP42680 631 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 ERVK-9P63128 1117 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 ERVK-24P63145 666 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 IL17AQ16552 155 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 ARHGEF16Q5VV41 709 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 RBM43Q6ZSC3 357 aaKnown RBP10.94□□□□□ -0.66
PTPN20-202ENST00000374339 NCAPG2Q86XI2 1143 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 CEP57L1Q8IYX8 460 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 IQUBQ8NA54 791 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 GPRC5AQ8NFJ5 357 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 RASSF8Q8NHQ8 419 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 ETNPPLQ8TBG4 499 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 EPSTI1Q96J88 318 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 MPHOSPH6Q99547 160 aaKnown RBP10.94□□□□□ -0.66
PTPN20-202ENST00000374339 MOV10L1Q9BXT6 1211 aaKnown RBP10.94□□□□□ -0.66
PTPN20-202ENST00000374339 CCSER1Q9C0I3 900 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 A1CFQ9NQ94 594 aaKnown RBP10.94□□□□□ -0.66
PTPN20-202ENST00000374339 PXMP2Q9NR77 195 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 COL20A1Q9P218 1284 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 RBPJLQ9UBG7 517 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 LRWD1Q9UFC0 647 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 CCDC39Q9UFE4 941 aa10.94□□□□□ -0.66
PTPN20-202ENST00000374339 ABT1Q9ULW3 272 aaKnown RBP10.94□□□□□ -0.66
PTPN20-202ENST00000374339 IGLV3-22A0A075B6J6 115 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 MEIS1O00470 390 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 SLFN14P0C7P3 912 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 CYP2C8P10632 490 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 ERCC3P19447 782 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 SREBF2Q12772 1141 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 PGM5Q15124 567 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 ZRSR1Q15695 479 aaKnown RBP10.93□□□□□ -0.66
PTPN20-202ENST00000374339 CAMK4Q16566 473 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 POTEEQ6S8J3 1075 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 LRSAM1Q6UWE0 723 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 KRBA2Q6ZNG9 492 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 PLA2G4DQ86XP0 818 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 CNNM3Q8NE01 707 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 ERMNQ8TAM6 284 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 HAS1Q92839 578 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 LENG9Q96B70 501 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 TAAR1Q96RJ0 339 aa10.93□□□□□ -0.66
PTPN20-202ENST00000374339 IWS1Q96ST2 819 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms