RNA–Protein interactions for RNA: ENST00000372731.8

SPTAN1-202, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-202ENST00000372731 PPP1R12AO14974 1030 aaPredicted RBP9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 VEPH1Q14D04 833 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 ZC3H15Q8WU90 426 aaKnown RBP9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 SRGAP2CP0DJJ0 459 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 MYL7Q01449 175 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 TBC1D19Q8N5T2 526 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 RNF10Q8N5U6 811 aaKnown RBP9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 FBXL13Q8NEE6 735 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 COPRSQ9NQ92 184 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 PRAMEF22A3QJZ6 481 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 COBLO75128 1261 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 NPM3O75607 178 aaKnown RBP9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 TTLL1O95922 423 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 ACTN1P12814 892 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 PAK2Q13177 524 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 NOLC1Q14978 699 aaKnown RBP eCLIP9.97□□□□□ -0.813e-7■□□□□ 9.2
SPTAN1-202ENST00000372731 KLHL7Q8IXQ5 586 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 RPGRIP1Q96KN7 1286 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 ZNF804BA4D1E1 1349 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 USP17L3A6NCW0 530 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 USP17L4A6NCW7 530 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 ABCB4P21439 1286 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 PPP2R3AQ06190 1150 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 SF3A3Q12874 501 aaKnown RBP eCLIP9.97□□□□□ -0.814e-6■■□□□ 11.7
SPTAN1-202ENST00000372731 USP17L1Q7RTZ2 530 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 CDV3Q9UKY7 258 aaKnown RBP9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 FAN1Q9Y2M0 1017 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 GOLGA8HP0CJ92 632 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 ACCSLQ4AC99 568 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 AFG1LQ8WV93 481 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 TCP11Q8WWU5 503 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 CCDC127Q96BQ5 260 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 DDX50Q9BQ39 737 aaKnown RBP9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 AMNQ9BXJ7 453 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 ATP10DQ9P241 1426 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 SBNO1A3KN83 1393 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 MCF2LO15068 1137 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 GADD45BO75293 160 aaPredicted RBP9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 RAD17O75943 681 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 ATF2P15336 505 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 TFAMQ00059 246 aaKnown RBP9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 MLKLQ8NB16 471 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 PPP1R12CQ9BZL4 782 aa9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 MRPL46Q9H2W6 279 aaKnown RBP9.97□□□□□ -0.81
SPTAN1-202ENST00000372731 BUB1BO60566 1050 aaPredicted RBP9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 CPP00450 1065 aa9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 PDE1BQ01064 536 aa9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 ASPRV1Q53RT3 343 aa9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 RWDD4Q6NW29 188 aaKnown RBP9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 ARHGEF18Q6ZSZ5 1173 aa9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 PATL1Q86TB9 770 aaKnown RBP9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 APOBEC3FQ8IUX4 373 aaKnown RBP9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 SH3KBP1Q96B97 665 aa9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 METTL14Q9HCE5 456 aaKnown RBP9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 VPS54Q9P1Q0 977 aa9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 STX2P32856 288 aa9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 RRAGAQ7L523 313 aa9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 C17orf53Q8N3J3 647 aaPredicted RBP9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 SELENONQ9NZV5 590 aa9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 EIF3DO15371 548 aaKnown RBP eCLIP9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 ATICP31939 592 aa9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 ANKS3Q6ZW76 656 aa9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 DIS3L2Q8IYB7 885 aaKnown RBP9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 AFAP1L1Q8TED9 768 aa9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 IFT43Q96FT9 208 aa9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 INPP5FQ9Y2H2 1132 aa9.96□□□□□ -0.81
SPTAN1-202ENST00000372731 MAP3K15Q6ZN16 1313 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 MAST1Q9Y2H9 1570 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 RNF40O75150 1001 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 INHBAP08476 426 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 EIF2B5Q13144 721 aaKnown RBP9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 GPATCH4Q5T3I0 446 aaKnown RBP9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 NBPF26B4DH59 902 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 ALDH1A1P00352 501 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 LTKP29376 864 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 LRRC24Q50LG9 513 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 RSBN1LQ6PCB5 846 aaPredicted RBP9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 SPICE1Q8N0Z3 855 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 ARMCX3Q9UH62 379 aaPredicted RBP9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 PHLPP2Q6ZVD8 1323 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 UBXN8O00124 270 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 MAGEA1P43355 309 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 NEK8Q86SG6 692 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 DDX53Q86TM3 631 aaKnown RBP9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 TRIM42Q8IWZ5 723 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 BLIDQ8IZY5 108 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 KCTD6Q8NC69 237 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 ENOX1Q8TC92 643 aaKnown RBP9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 MGARPQ8TDB4 240 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 DNAJC7Q99615 494 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 SUDS3Q9H7L9 328 aaPredicted RBP9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 MAP10Q9P2G4 905 aa9.96□□□□□ -0.82
SPTAN1-202ENST00000372731 MARK3P27448 753 aa9.95□□□□□ -0.82
SPTAN1-202ENST00000372731 EEPD1Q7L9B9 569 aa9.95□□□□□ -0.82
SPTAN1-202ENST00000372731 ACCSQ96QU6 501 aa9.95□□□□□ -0.82
SPTAN1-202ENST00000372731 PCDHB8Q9UN66 801 aa9.95□□□□□ -0.82
SPTAN1-202ENST00000372731 NFX1Q12986 1120 aaKnown RBP9.95□□□□□ -0.82
SPTAN1-202ENST00000372731 PTPROQ16827 1216 aa9.95□□□□□ -0.82
SPTAN1-202ENST00000372731 MORC4Q8TE76 937 aa9.95□□□□□ -0.82
SPTAN1-202ENST00000372731 CENPKQ9BS16 269 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms