RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 RAB27AP51159 221 aa20.18■□□□□ 0.82
MMP9-201ENST00000372330 PPP2R2AP63151 447 aa20.18■□□□□ 0.82
MMP9-201ENST00000372330 MRPS25P82663 173 aaKnown RBP20.18■□□□□ 0.82
MMP9-201ENST00000372330 GUCY2DQ02846 1103 aa20.18■□□□□ 0.82
MMP9-201ENST00000372330 ZNF268Q14587 947 aaPredicted RBP20.18■□□□□ 0.82
MMP9-201ENST00000372330 TRIM22Q8IYM9 498 aa20.18■□□□□ 0.82
MMP9-201ENST00000372330 IFNL3Q8IZI9 196 aa20.18■□□□□ 0.82
MMP9-201ENST00000372330 MAGEB6Q8N7X4 407 aa20.18■□□□□ 0.82
MMP9-201ENST00000372330 EPSTI1Q96J88 318 aa20.18■□□□□ 0.82
MMP9-201ENST00000372330 L3MBTL3Q96JM7 780 aaPredicted RBP20.18■□□□□ 0.82
MMP9-201ENST00000372330 ANKRD27Q96NW4 1050 aa20.18■□□□□ 0.82
MMP9-201ENST00000372330 TRIM21P19474 475 aaKnown RBP20.17■□□□□ 0.82
MMP9-201ENST00000372330 BLMHQ13867 455 aa20.17■□□□□ 0.82
MMP9-201ENST00000372330 AGBL2Q5U5Z8 902 aa20.17■□□□□ 0.82
MMP9-201ENST00000372330 NFRKBQ6P4R8 1299 aa20.17■□□□□ 0.82
MMP9-201ENST00000372330 SLC30A9Q6PML9 568 aa20.17■□□□□ 0.82
MMP9-201ENST00000372330 NAPBQ9H115 298 aa20.17■□□□□ 0.82
MMP9-201ENST00000372330 SENP2Q9HC62 589 aa20.17■□□□□ 0.82
MMP9-201ENST00000372330 EPB41L4AQ9HCS5 686 aaPredicted RBP20.17■□□□□ 0.82
MMP9-201ENST00000372330 FAM217BQ9NTX9 383 aaPredicted RBP20.17■□□□□ 0.82
MMP9-201ENST00000372330 CCDC87Q9NVE4 849 aa20.17■□□□□ 0.82
MMP9-201ENST00000372330 LRWD1Q9UFC0 647 aa20.17■□□□□ 0.82
MMP9-201ENST00000372330 TAOK2Q9UL54 1235 aa20.17■□□□□ 0.82
MMP9-201ENST00000372330 CAPN6Q9Y6Q1 641 aa20.17■□□□□ 0.82
MMP9-201ENST00000372330 ORC4O43929 436 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 SRGNP10124 158 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 CASP1P29466 404 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 APLFQ8IW19 511 aaPredicted RBP20.16■□□□□ 0.82
MMP9-201ENST00000372330 MFN1Q8IWA4 741 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 NOC3LQ8WTT2 800 aaKnown RBP20.16■□□□□ 0.82
MMP9-201ENST00000372330 RAPGEF5Q92565 580 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 CNKSR1Q969H4 720 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 LY9Q9HBG7 655 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 SLC12A4Q9UP95 1085 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 TRIM75PA6NK02 468 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 MBD4O95243 580 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 ALADP13716 330 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 CCND1P24385 295 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 LIFRP42702 1097 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 CYP27A1Q02318 531 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 MKRN4PQ13434 485 aaPredicted RBP20.16■□□□□ 0.82
MMP9-201ENST00000372330 ZC3H12AQ5D1E8 599 aaKnown RBP20.16■□□□□ 0.82
MMP9-201ENST00000372330 NFXL1Q6ZNB6 911 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 IRF2BP1Q8IU81 584 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 CCDC197Q8NCU1 140 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 SYMPKQ92797 1274 aaKnown RBP20.16■□□□□ 0.82
MMP9-201ENST00000372330 LRRC45Q96CN5 670 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 IFIH1Q9BYX4 1025 aaKnown RBP20.16■□□□□ 0.82
MMP9-201ENST00000372330 THAP9Q9H5L6 903 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 INCENPQ9NQS7 918 aa20.16■□□□□ 0.82
MMP9-201ENST00000372330 A0A1W2PQJ5 194 aa20.15■□□□□ 0.82
MMP9-201ENST00000372330 CRKLP46109 303 aaKnown RBP20.15■□□□□ 0.82
MMP9-201ENST00000372330 GUCY2FP51841 1108 aa20.15■□□□□ 0.82
MMP9-201ENST00000372330 PARP10Q53GL7 1025 aa20.15■□□□□ 0.82
MMP9-201ENST00000372330 ODF2Q5BJF6 829 aa20.15■□□□□ 0.82
MMP9-201ENST00000372330 FIGNQ5HY92 759 aa20.15■□□□□ 0.82
MMP9-201ENST00000372330 TMEM67Q5HYA8 995 aa20.15■□□□□ 0.82
MMP9-201ENST00000372330 DRAXINQ8NBI3 349 aaPredicted RBP20.15■□□□□ 0.82
MMP9-201ENST00000372330 NDST4Q9H3R1 872 aa20.15■□□□□ 0.82
MMP9-201ENST00000372330 A6NHS1 94 aa20.15■□□□□ 0.82
MMP9-201ENST00000372330 GTPBP6O43824 516 aaPredicted RBP20.15■□□□□ 0.82
MMP9-201ENST00000372330 ATP2C2O75185 946 aa20.15■□□□□ 0.82
MMP9-201ENST00000372330 RTN3O95197 1032 aaPredicted RBP20.15■□□□□ 0.82
MMP9-201ENST00000372330 FERP16591 822 aa20.15■□□□□ 0.82
MMP9-201ENST00000372330 CENPTQ96BT3 561 aa20.15■□□□□ 0.82
MMP9-201ENST00000372330 CNOT10Q9H9A5 744 aaKnown RBP20.15■□□□□ 0.82
MMP9-201ENST00000372330 SLC5A4Q9NY91 659 aa20.15■□□□□ 0.82
MMP9-201ENST00000372330 PCDHA13Q9Y5I0 950 aa20.15■□□□□ 0.82
MMP9-201ENST00000372330 GRID2IPA4D2P6 1211 aa20.14■□□□□ 0.82
MMP9-201ENST00000372330 ITIH4Q14624 930 aa20.14■□□□□ 0.82
MMP9-201ENST00000372330 CCDC152Q4G0S7 254 aa20.14■□□□□ 0.82
MMP9-201ENST00000372330 ARMT1Q9H993 441 aa20.14■□□□□ 0.82
MMP9-201ENST00000372330 AGPAT5Q9NUQ2 364 aa20.14■□□□□ 0.82
MMP9-201ENST00000372330 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.14■□□□□ 0.82
MMP9-201ENST00000372330 ZSWIM5Q9P217 1185 aa20.14■□□□□ 0.82
MMP9-201ENST00000372330 MAGEC2Q9UBF1 373 aaPredicted RBP20.14■□□□□ 0.82
MMP9-201ENST00000372330 COL4A1P02462 1669 aa20.14■□□□□ 0.81
MMP9-201ENST00000372330 GOLGA6L10A0A0M3HER8 536 aa20.14■□□□□ 0.81
MMP9-201ENST00000372330 TTC36A6NLP5 189 aa20.14■□□□□ 0.81
MMP9-201ENST00000372330 CAMTA2O94983 1202 aa20.14■□□□□ 0.81
MMP9-201ENST00000372330 LCA5LO95447 670 aa20.14■□□□□ 0.81
MMP9-201ENST00000372330 CLTAP09496 248 aa20.14■□□□□ 0.81
MMP9-201ENST00000372330 DRD4P21917 467 aa20.14■□□□□ 0.81
MMP9-201ENST00000372330 TEX9Q8N6V9 391 aa20.14■□□□□ 0.81
MMP9-201ENST00000372330 DOCK2Q92608 1830 aa20.14■□□□□ 0.81
MMP9-201ENST00000372330 ZNF570Q96NI8 536 aa20.14■□□□□ 0.81
MMP9-201ENST00000372330 CNNM2Q9H8M5 875 aa20.14■□□□□ 0.81
MMP9-201ENST00000372330 EXOC1Q9NV70 894 aa20.14■□□□□ 0.81
MMP9-201ENST00000372330 VPS54Q9P1Q0 977 aa20.14■□□□□ 0.81
MMP9-201ENST00000372330 GSG1L2A8MUP6 293 aa20.13■□□□□ 0.81
MMP9-201ENST00000372330 COBLO75128 1261 aa20.13■□□□□ 0.81
MMP9-201ENST00000372330 MOCS3O95396 460 aa20.13■□□□□ 0.81
MMP9-201ENST00000372330 CXCR5P32302 372 aa20.13■□□□□ 0.81
MMP9-201ENST00000372330 CTDSPL2Q05D32 466 aa20.13■□□□□ 0.81
MMP9-201ENST00000372330 CCDC38Q502W7 563 aa20.13■□□□□ 0.81
MMP9-201ENST00000372330 FKBP15Q5T1M5 1219 aa20.13■□□□□ 0.81
MMP9-201ENST00000372330 CACNA2D4Q7Z3S7 1137 aa20.13■□□□□ 0.81
MMP9-201ENST00000372330 PNMA8AQ86V59 439 aaPredicted RBP20.13■□□□□ 0.81
MMP9-201ENST00000372330 RNF10Q8N5U6 811 aaKnown RBP20.13■□□□□ 0.81
MMP9-201ENST00000372330 CHMP6Q96FZ7 201 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms